RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 UBE2D2P62837 147 aa9.52□□□□□ -0.89
LIMS1-201ENST00000332345 LINC01556Q5JQF7 62 aa9.52□□□□□ -0.89
LIMS1-201ENST00000332345 SMIM15Q7Z3B0 74 aa9.52□□□□□ -0.89
LIMS1-201ENST00000332345 NEXN-AS1Q8NBZ9 246 aa9.52□□□□□ -0.89
LIMS1-201ENST00000332345 GTSF1Q8WW33 167 aa9.52□□□□□ -0.89
LIMS1-201ENST00000332345 DPH3P1Q9H4G8 78 aa9.52□□□□□ -0.89
LIMS1-201ENST00000332345 FAT2Q9NYQ8 4349 aa9.51□□□□□ -0.89
LIMS1-201ENST00000332345 FAM231BA6NCW3 169 aa9.51□□□□□ -0.89
LIMS1-201ENST00000332345 RPL23P62829 140 aaKnown RBP9.51□□□□□ -0.89
LIMS1-201ENST00000332345 TSKUQ8WUA8 353 aa9.51□□□□□ -0.89
LIMS1-201ENST00000332345 BORCS7Q96B45 105 aa9.51□□□□□ -0.89
LIMS1-201ENST00000332345 PGLYRP4Q96LB8 373 aa9.51□□□□□ -0.89
LIMS1-201ENST00000332345 GFRA4Q9GZZ7 299 aa9.51□□□□□ -0.89
LIMS1-201ENST00000332345 TNFRSF18Q9Y5U5 241 aa9.51□□□□□ -0.89
LIMS1-201ENST00000332345 ADIRFQ15847 76 aa9.5□□□□□ -0.89
LIMS1-201ENST00000332345 ISOC2Q96AB3 205 aa9.5□□□□□ -0.89
LIMS1-201ENST00000332345 DNAJC30Q96LL9 226 aa9.5□□□□□ -0.89
LIMS1-201ENST00000332345 A0A1B0GVY2 172 aa9.49□□□□□ -0.89
LIMS1-201ENST00000332345 M0QY20 66 aa9.49□□□□□ -0.89
LIMS1-201ENST00000332345 TNP2Q05952 138 aa9.49□□□□□ -0.89
LIMS1-201ENST00000332345 TMEM97Q5BJF2 176 aa9.49□□□□□ -0.89
LIMS1-201ENST00000332345 DAZ4Q86SG3 579 aaKnown RBP9.49□□□□□ -0.89
LIMS1-201ENST00000332345 DAZ3Q9NR90 486 aaKnown RBP9.49□□□□□ -0.89
LIMS1-201ENST00000332345 A0A1B0GUT8 65 aa9.48□□□□□ -0.89
LIMS1-201ENST00000332345 HIGD1CA8MV81 97 aa9.48□□□□□ -0.89
LIMS1-201ENST00000332345 IGHV3-30P01768 117 aa9.48□□□□□ -0.89
LIMS1-201ENST00000332345 IGHV3-33P01772 117 aa9.48□□□□□ -0.89
LIMS1-201ENST00000332345 IGHV3-30-3P0DP02 117 aa9.48□□□□□ -0.89
LIMS1-201ENST00000332345 IGHV3-30-5P0DP03 117 aa9.48□□□□□ -0.89
LIMS1-201ENST00000332345 CLLU1Q5K131 121 aa9.48□□□□□ -0.89
LIMS1-201ENST00000332345 SUMO4Q6EEV6 95 aa9.48□□□□□ -0.89
LIMS1-201ENST00000332345 RASL11AQ6T310 242 aa9.48□□□□□ -0.89
LIMS1-201ENST00000332345 URGCP-MRPS24S4R325 110 aa9.48□□□□□ -0.89
LIMS1-201ENST00000332345 V9GYV3 84 aa9.48□□□□□ -0.89
LIMS1-201ENST00000332345 HECTD4Q9Y4D8 3996 aa9.48□□□□□ -0.89
LIMS1-201ENST00000332345 TRBV6-8A0A0A6YYG3 113 aa9.47□□□□□ -0.89
LIMS1-201ENST00000332345 IBA57-AS1B1ANH7 110 aa9.47□□□□□ -0.89
LIMS1-201ENST00000332345 KCNIP4Q6PIL6 250 aa9.47□□□□□ -0.89
LIMS1-201ENST00000332345 NIT2Q9NQR4 276 aa9.47□□□□□ -0.89
LIMS1-201ENST00000332345 FRZBQ92765 325 aa9.46□□□□□ -0.9
LIMS1-201ENST00000332345 A0A087WX48 190 aa9.45□□□□□ -0.9
LIMS1-201ENST00000332345 TMEM262E9PQX1 116 aa9.45□□□□□ -0.9
LIMS1-201ENST00000332345 IFITM2Q01629 132 aa9.45□□□□□ -0.9
LIMS1-201ENST00000332345 RIGQ13278 110 aa9.45□□□□□ -0.9
LIMS1-201ENST00000332345 LAGE3Q14657 143 aa9.45□□□□□ -0.9
LIMS1-201ENST00000332345 Q6ZRN7 208 aaPredicted RBP9.45□□□□□ -0.9
LIMS1-201ENST00000332345 NIT1Q86X76 327 aa9.45□□□□□ -0.9
LIMS1-201ENST00000332345 CHCHD7Q9BUK0 85 aa9.45□□□□□ -0.9
LIMS1-201ENST00000332345 NAT8BQ9UHF3 227 aa9.45□□□□□ -0.9
LIMS1-201ENST00000332345 BIRC6Q9NR09 4857 aa9.44□□□□□ -0.9
LIMS1-201ENST00000332345 PKD1P98161 4303 aa9.44□□□□□ -0.9
LIMS1-201ENST00000332345 EREGO14944 169 aa9.44□□□□□ -0.9
LIMS1-201ENST00000332345 PKIAP61925 76 aa9.44□□□□□ -0.9
LIMS1-201ENST00000332345 ELOBQ15370 118 aa9.44□□□□□ -0.9
LIMS1-201ENST00000332345 GATD1Q8NB37 220 aa9.44□□□□□ -0.9
LIMS1-201ENST00000332345 NUP35Q8NFH5 326 aa9.44□□□□□ -0.9
LIMS1-201ENST00000332345 TRAV8-3A0A0A6YYJ7 113 aa9.43□□□□□ -0.9
LIMS1-201ENST00000332345 SMIM27A0A1W2PRY6 76 aa9.43□□□□□ -0.9
LIMS1-201ENST00000332345 TMEM191AQ9H0A3 160 aa9.43□□□□□ -0.9
LIMS1-201ENST00000332345 Q9HAA7 133 aa9.43□□□□□ -0.9
LIMS1-201ENST00000332345 TRBV25-1A0A075B6N4 114 aa9.42□□□□□ -0.9
LIMS1-201ENST00000332345 PPP1R2P9O14990 202 aa9.42□□□□□ -0.9
LIMS1-201ENST00000332345 PSCAO43653 123 aa9.42□□□□□ -0.9
LIMS1-201ENST00000332345 PNRC1Q12796 327 aaPredicted RBP9.42□□□□□ -0.9
LIMS1-201ENST00000332345 CHCHD5Q9BSY4 110 aa9.42□□□□□ -0.9
LIMS1-201ENST00000332345 TM2D2Q9BX73 214 aa9.42□□□□□ -0.9
LIMS1-201ENST00000332345 TRAV26-2A0A0B4J265 109 aa9.41□□□□□ -0.9
LIMS1-201ENST00000332345 IGHV1-24A0A0C4DH33 117 aa9.41□□□□□ -0.9
LIMS1-201ENST00000332345 UQCC3Q6UW78 93 aa9.41□□□□□ -0.9
LIMS1-201ENST00000332345 NTM-AS1Q6ZSK4 140 aa9.41□□□□□ -0.9
LIMS1-201ENST00000332345 Q8N3U1 123 aa9.41□□□□□ -0.9
LIMS1-201ENST00000332345 A0A1B0GW15 77 aa9.4□□□□□ -0.9
LIMS1-201ENST00000332345 IQCJQ1A5X6 159 aa9.4□□□□□ -0.9
LIMS1-201ENST00000332345 KLK12Q9UKR0 248 aa9.4□□□□□ -0.9
LIMS1-201ENST00000332345 PKHD1P08F94 4074 aa9.4□□□□□ -0.91
LIMS1-201ENST00000332345 MT-ND4LP03901 98 aa9.39□□□□□ -0.91
LIMS1-201ENST00000332345 RAB4AP20338 218 aa9.39□□□□□ -0.91
LIMS1-201ENST00000332345 COTL1Q14019 142 aa9.39□□□□□ -0.91
LIMS1-201ENST00000332345 SPATA12Q7Z6I5 190 aa9.39□□□□□ -0.91
LIMS1-201ENST00000332345 RMI2Q96E14 147 aa9.39□□□□□ -0.91
LIMS1-201ENST00000332345 COX11Q9Y6N1 276 aa9.39□□□□□ -0.91
LIMS1-201ENST00000332345 S100A8P05109 93 aa9.38□□□□□ -0.91
LIMS1-201ENST00000332345 Q0VG73 95 aa9.38□□□□□ -0.91
LIMS1-201ENST00000332345 ANAPC16Q96DE5 110 aa9.38□□□□□ -0.91
LIMS1-201ENST00000332345 RPL39LQ96EH5 51 aaKnown RBP9.38□□□□□ -0.91
LIMS1-201ENST00000332345 MRAP2Q96G30 205 aa9.38□□□□□ -0.91
LIMS1-201ENST00000332345 TMEM243Q9BU79 118 aa9.38□□□□□ -0.91
LIMS1-201ENST00000332345 A0A087WTM6 91 aa9.37□□□□□ -0.91
LIMS1-201ENST00000332345 TRBV6-5A0A0K0K1A5 114 aa9.37□□□□□ -0.91
LIMS1-201ENST00000332345 C16orf90A8MZG2 172 aa9.37□□□□□ -0.91
LIMS1-201ENST00000332345 PPP1R17O96001 155 aa9.37□□□□□ -0.91
LIMS1-201ENST00000332345 ANGP03950 147 aaKnown RBP9.37□□□□□ -0.91
LIMS1-201ENST00000332345 CAMPP49913 170 aa9.37□□□□□ -0.91
LIMS1-201ENST00000332345 GAGE6Q13070 117 aa9.37□□□□□ -0.91
LIMS1-201ENST00000332345 MPV17L2Q567V2 206 aa9.37□□□□□ -0.91
LIMS1-201ENST00000332345 ATRAIDQ6UW56 229 aa9.37□□□□□ -0.91
LIMS1-201ENST00000332345 AMN1Q8IY45 258 aa9.37□□□□□ -0.91
LIMS1-201ENST00000332345 UBE2WQ96B02 151 aa9.37□□□□□ -0.91
LIMS1-201ENST00000332345 RNF185Q96GF1 192 aa9.37□□□□□ -0.91
LIMS1-201ENST00000332345 ST20Q9HBF5 79 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms