RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 MYO9AB2RTY4 2548 aa10.8□□□□□ -0.68
SNX20-202ENST00000330943 NDUFA4O00483 81 aa10.8□□□□□ -0.68
SNX20-202ENST00000330943 NPFFO15130 113 aa10.8□□□□□ -0.68
SNX20-202ENST00000330943 APRG1Q8IVJ8 170 aa10.8□□□□□ -0.68
SNX20-202ENST00000330943 IGHV3OR16-10A0A075B7F0 116 aa10.8□□□□□ -0.68
SNX20-202ENST00000330943 Q1RN00 199 aa10.8□□□□□ -0.68
SNX20-202ENST00000330943 TMEM263Q8WUH6 116 aaKnown RBP10.79□□□□□ -0.68
SNX20-202ENST00000330943 MOB4Q9Y3A3 225 aa10.79□□□□□ -0.68
SNX20-202ENST00000330943 MUSTN1Q8IVN3 82 aa10.78□□□□□ -0.68
SNX20-202ENST00000330943 SS18L2Q9UHA2 77 aa10.78□□□□□ -0.68
SNX20-202ENST00000330943 TRAV12-3A0A0B4J271 114 aa10.78□□□□□ -0.68
SNX20-202ENST00000330943 TRBV27A0A0K0K1C4 114 aa10.78□□□□□ -0.68
SNX20-202ENST00000330943 NTN5Q8WTR8 489 aaPredicted RBP10.78□□□□□ -0.68
SNX20-202ENST00000330943 CITED1Q99966 193 aa10.78□□□□□ -0.68
SNX20-202ENST00000330943 LEPROTO15243 131 aa10.78□□□□□ -0.68
SNX20-202ENST00000330943 ELANEP08246 267 aa10.78□□□□□ -0.68
SNX20-202ENST00000330943 C19orf54Q5BKX5 351 aa10.78□□□□□ -0.68
SNX20-202ENST00000330943 RHPN1-AS1Q9BWJ2 59 aa10.78□□□□□ -0.68
SNX20-202ENST00000330943 DOPEY1Q5JWR5 2465 aa10.77□□□□□ -0.68
SNX20-202ENST00000330943 TMEM223A0PJW6 202 aa10.77□□□□□ -0.69
SNX20-202ENST00000330943 ZNF56Q15929 161 aa10.77□□□□□ -0.69
SNX20-202ENST00000330943 BEX4Q9NWD9 120 aaPredicted RBP10.77□□□□□ -0.69
SNX20-202ENST00000330943 IGHV4-39P01824 125 aa10.77□□□□□ -0.69
SNX20-202ENST00000330943 A0A0B4J2C4 111 aa10.76□□□□□ -0.69
SNX20-202ENST00000330943 KLLNB2CW77 178 aa10.76□□□□□ -0.69
SNX20-202ENST00000330943 SNCGO76070 127 aa10.76□□□□□ -0.69
SNX20-202ENST00000330943 KLRB1Q12918 225 aa10.76□□□□□ -0.69
SNX20-202ENST00000330943 ANKRD17O75179 2603 aaKnown RBP10.76□□□□□ -0.69
SNX20-202ENST00000330943 TRBV7-9A0A0J9YWB2 115 aa10.76□□□□□ -0.69
SNX20-202ENST00000330943 UBTD1Q9HAC8 227 aa10.76□□□□□ -0.69
SNX20-202ENST00000330943 ZNF580Q9UK33 172 aa10.76□□□□□ -0.69
SNX20-202ENST00000330943 LGALS9O00182 355 aa10.75□□□□□ -0.69
SNX20-202ENST00000330943 Q8N1Y9 231 aa10.75□□□□□ -0.69
SNX20-202ENST00000330943 NAV2Q8IVL1 2488 aa10.75□□□□□ -0.69
SNX20-202ENST00000330943 ABCA2Q9BZC7 2435 aa10.75□□□□□ -0.69
SNX20-202ENST00000330943 TRAV4A0A0B4J268 109 aa10.75□□□□□ -0.69
SNX20-202ENST00000330943 P0DMU3 169 aa10.75□□□□□ -0.69
SNX20-202ENST00000330943 FAM231AP0DMU4 169 aa10.75□□□□□ -0.69
SNX20-202ENST00000330943 FAM231CP0DMU5 169 aa10.75□□□□□ -0.69
SNX20-202ENST00000330943 ZNF22P17026 224 aaPredicted RBP10.75□□□□□ -0.69
SNX20-202ENST00000330943 GAGE2BQ13066 116 aa10.75□□□□□ -0.69
SNX20-202ENST00000330943 GAGE5Q13069 117 aa10.75□□□□□ -0.69
SNX20-202ENST00000330943 GAGE6Q13070 117 aa10.75□□□□□ -0.69
SNX20-202ENST00000330943 LINC01620Q4KN68 170 aa10.75□□□□□ -0.69
SNX20-202ENST00000330943 GAGE2EQ4V326 116 aa10.75□□□□□ -0.69
SNX20-202ENST00000330943 GAGE2DQ9UEU5 116 aa10.75□□□□□ -0.69
SNX20-202ENST00000330943 TRBV6-5A0A0K0K1A5 114 aa10.74□□□□□ -0.69
SNX20-202ENST00000330943 B5MCH6 92 aa10.74□□□□□ -0.69
SNX20-202ENST00000330943 M0QXV9 152 aa10.74□□□□□ -0.69
SNX20-202ENST00000330943 RHODO00212 210 aa10.74□□□□□ -0.69
SNX20-202ENST00000330943 CRLF1O75462 422 aa10.74□□□□□ -0.69
SNX20-202ENST00000330943 ATXN8Q156A1 80 aa10.74□□□□□ -0.69
SNX20-202ENST00000330943 BPESC1Q9GZL8 116 aa10.74□□□□□ -0.69
SNX20-202ENST00000330943 A0A0J9YXV3 536 aa10.74□□□□□ -0.69
SNX20-202ENST00000330943 IGHV1-69P01742 117 aa10.74□□□□□ -0.69
SNX20-202ENST00000330943 EDN2P20800 178 aa10.74□□□□□ -0.69
SNX20-202ENST00000330943 NOTCH3Q9UM47 2321 aa10.74□□□□□ -0.69
SNX20-202ENST00000330943 TEX49A0A1B0GTD5 131 aa10.74□□□□□ -0.69
SNX20-202ENST00000330943 ADARB2-AS1A8MUL3 147 aa10.74□□□□□ -0.69
SNX20-202ENST00000330943 C19orf84I3L1E1 186 aa10.74□□□□□ -0.69
SNX20-202ENST00000330943 NHLRC4P0CG21 123 aaPredicted RBP10.74□□□□□ -0.69
SNX20-202ENST00000330943 PF4V1P10720 104 aa10.74□□□□□ -0.69
SNX20-202ENST00000330943 MXRA5Q9NR99 2828 aa10.74□□□□□ -0.69
SNX20-202ENST00000330943 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.73□□□□□ -0.69
SNX20-202ENST00000330943 LMO4P61968 165 aa10.73□□□□□ -0.69
SNX20-202ENST00000330943 NSUN5P1Q3KNT7 163 aa10.73□□□□□ -0.69
SNX20-202ENST00000330943 BRD3OSQ6XYD6 125 aa10.73□□□□□ -0.69
SNX20-202ENST00000330943 M0QY20 66 aa10.73□□□□□ -0.69
SNX20-202ENST00000330943 MDFICQ9P1T7 246 aa10.73□□□□□ -0.69
SNX20-202ENST00000330943 FBN2P35556 2912 aa10.73□□□□□ -0.69
SNX20-202ENST00000330943 NF1P21359 2839 aa10.72□□□□□ -0.69
SNX20-202ENST00000330943 SORL1Q92673 2214 aa10.72□□□□□ -0.69
SNX20-202ENST00000330943 IGKV3-20P01619 116 aa10.72□□□□□ -0.69
SNX20-202ENST00000330943 LY6EQ16553 131 aa10.72□□□□□ -0.69
SNX20-202ENST00000330943 TRAV12-2A0A075B6T6 113 aa10.72□□□□□ -0.69
SNX20-202ENST00000330943 RHOHQ15669 191 aa10.72□□□□□ -0.69
SNX20-202ENST00000330943 A0A0J9YXY3 114 aa10.71□□□□□ -0.69
SNX20-202ENST00000330943 M0R2P5 195 aa10.71□□□□□ -0.69
SNX20-202ENST00000330943 TRIAP1O43715 76 aa10.71□□□□□ -0.69
SNX20-202ENST00000330943 GNLYP22749 145 aa10.71□□□□□ -0.69
SNX20-202ENST00000330943 NDUFV3P56181 108 aaKnown RBP10.71□□□□□ -0.69
SNX20-202ENST00000330943 DAZ1Q9NQZ3 744 aaKnown RBP10.71□□□□□ -0.69
SNX20-202ENST00000330943 TEX15Q9BXT5 2789 aa10.71□□□□□ -0.69
SNX20-202ENST00000330943 NBPF19A0A087WUL8 3843 aa10.71□□□□□ -0.69
SNX20-202ENST00000330943 CFAP161Q6P656 301 aa10.71□□□□□ -0.69
SNX20-202ENST00000330943 C20orf203Q8NBC4 194 aa10.71□□□□□ -0.69
SNX20-202ENST00000330943 TRAV8-4A0A0B4J246 113 aa10.71□□□□□ -0.7
SNX20-202ENST00000330943 IGHV3-16A0A0C4DH30 117 aa10.71□□□□□ -0.7
SNX20-202ENST00000330943 PRSS2P07478 247 aa10.71□□□□□ -0.7
SNX20-202ENST00000330943 USMG5Q96IX5 58 aa10.71□□□□□ -0.7
SNX20-202ENST00000330943 SPXQ9BT56 116 aa10.71□□□□□ -0.7
SNX20-202ENST00000330943 NOTCH2Q04721 2471 aa10.7□□□□□ -0.7
SNX20-202ENST00000330943 IGLV4-3A0A075B6K6 122 aa10.7□□□□□ -0.7
SNX20-202ENST00000330943 C9orf85Q96MD7 179 aa10.7□□□□□ -0.7
SNX20-202ENST00000330943 ID1P41134 155 aa10.7□□□□□ -0.7
SNX20-202ENST00000330943 TTC32Q5I0X7 151 aa10.7□□□□□ -0.7
SNX20-202ENST00000330943 TRBV10-2A0A0K0K1G8 114 aa10.69□□□□□ -0.7
SNX20-202ENST00000330943 H3BMM0 161 aa10.69□□□□□ -0.7
SNX20-202ENST00000330943 IGHV3-30-3P0DP02 117 aa10.69□□□□□ -0.7
SNX20-202ENST00000330943 UBE2WQ96B02 151 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms