RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 RNASE1P07998 156 aaKnown RBP12.06□□□□□ -0.48
SYNM-201ENST00000328642 CLPSL2Q6UWE3 100 aa12.06□□□□□ -0.48
SYNM-201ENST00000328642 TRPT1Q86TN4 253 aaKnown RBP12.06□□□□□ -0.48
SYNM-201ENST00000328642 IGLC6P0CF74 106 aa12.05□□□□□ -0.48
SYNM-201ENST00000328642 PROK1P58294 105 aa12.05□□□□□ -0.48
SYNM-201ENST00000328642 LGALS9BQ3B8N2 356 aa12.05□□□□□ -0.48
SYNM-201ENST00000328642 LGALS9CQ6DKI2 356 aa12.05□□□□□ -0.48
SYNM-201ENST00000328642 COX8AP10176 69 aa12.05□□□□□ -0.48
SYNM-201ENST00000328642 COL27A1Q8IZC6 1860 aaPredicted RBP12.05□□□□□ -0.48
SYNM-201ENST00000328642 K7EP13 123 aa12.04□□□□□ -0.48
SYNM-201ENST00000328642 PLNP26678 52 aa12.04□□□□□ -0.48
SYNM-201ENST00000328642 PSMB8P28062 276 aa12.04□□□□□ -0.48
SYNM-201ENST00000328642 SPATA12Q7Z6I5 190 aa12.04□□□□□ -0.48
SYNM-201ENST00000328642 A0A1B0GWB2 263 aa12.04□□□□□ -0.48
SYNM-201ENST00000328642 INAFM1C9JVW0 142 aa12.04□□□□□ -0.48
SYNM-201ENST00000328642 SAMD5Q5TGI4 173 aa12.04□□□□□ -0.48
SYNM-201ENST00000328642 ZNF479Q96JC4 524 aa12.04□□□□□ -0.48
SYNM-201ENST00000328642 LENEPQ9Y5L5 61 aa12.04□□□□□ -0.48
SYNM-201ENST00000328642 K7ERU9 68 aa12.03□□□□□ -0.48
SYNM-201ENST00000328642 MRPS16Q9Y3D3 137 aaKnown RBP12.03□□□□□ -0.48
SYNM-201ENST00000328642 TSSC4Q9Y5U2 329 aaPredicted RBP12.03□□□□□ -0.48
SYNM-201ENST00000328642 A0A0J9YY99 117 aa12.03□□□□□ -0.48
SYNM-201ENST00000328642 F8VRH5 84 aa12.03□□□□□ -0.48
SYNM-201ENST00000328642 DEFB121Q5J5C9 76 aa12.03□□□□□ -0.48
SYNM-201ENST00000328642 K7EMT4 169 aa12.03□□□□□ -0.48
SYNM-201ENST00000328642 GAGE6Q13070 117 aa12.03□□□□□ -0.48
SYNM-201ENST00000328642 HLA-DRB4P13762 266 aa12.02□□□□□ -0.48
SYNM-201ENST00000328642 ZNF702PQ9H963 129 aa12.02□□□□□ -0.48
SYNM-201ENST00000328642 HLA-DRB4X5D2U9 266 aa12.02□□□□□ -0.48
SYNM-201ENST00000328642 C3orf56Q8N813 242 aa12.02□□□□□ -0.49
SYNM-201ENST00000328642 I3L3M4 83 aa12.02□□□□□ -0.49
SYNM-201ENST00000328642 AMTNQ6UX39 209 aa12.02□□□□□ -0.49
SYNM-201ENST00000328642 COX11Q9Y6N1 276 aa12.02□□□□□ -0.49
SYNM-201ENST00000328642 SMG1Q96Q15 3661 aaKnown RBP12.02□□□□□ -0.49
SYNM-201ENST00000328642 NBEAL2Q6ZNJ1 2754 aa12.01□□□□□ -0.49
SYNM-201ENST00000328642 CIRBPQ14011 172 aaKnown RBP12.01□□□□□ -0.49
SYNM-201ENST00000328642 A0A0J9YXV3 536 aa12.01□□□□□ -0.49
SYNM-201ENST00000328642 BVES-AS1Q5T3Y7 98 aa12.01□□□□□ -0.49
SYNM-201ENST00000328642 LINC01545Q5VT33 79 aa12.01□□□□□ -0.49
SYNM-201ENST00000328642 URB1-AS1Q96HZ7 61 aa12.01□□□□□ -0.49
SYNM-201ENST00000328642 A0A1B0GV72 72 aa12.01□□□□□ -0.49
SYNM-201ENST00000328642 K7EQG2 157 aa12.01□□□□□ -0.49
SYNM-201ENST00000328642 PMVKQ15126 192 aa12.01□□□□□ -0.49
SYNM-201ENST00000328642 OR5A1Q8NGJ0 315 aa12□□□□□ -0.49
SYNM-201ENST00000328642 UNC79Q9P2D8 2635 aa11.99□□□□□ -0.49
SYNM-201ENST00000328642 A0A087WX48 190 aa11.99□□□□□ -0.49
SYNM-201ENST00000328642 SEC11AP67812 179 aa11.99□□□□□ -0.49
SYNM-201ENST00000328642 NBEAL1Q6ZS30 2694 aa11.99□□□□□ -0.49
SYNM-201ENST00000328642 ZFP2Q6ZN57 461 aa11.99□□□□□ -0.49
SYNM-201ENST00000328642 A8MWV9 139 aa11.99□□□□□ -0.49
SYNM-201ENST00000328642 M0R2P5 195 aa11.99□□□□□ -0.49
SYNM-201ENST00000328642 DEFB125Q8N687 156 aa11.99□□□□□ -0.49
SYNM-201ENST00000328642 RNF185Q96GF1 192 aa11.99□□□□□ -0.49
SYNM-201ENST00000328642 PGPEP1Q9NXJ5 209 aa11.99□□□□□ -0.49
SYNM-201ENST00000328642 RASL10AQ92737 203 aa11.98□□□□□ -0.49
SYNM-201ENST00000328642 SPAG8Q99932 426 aaPredicted RBP11.98□□□□□ -0.49
SYNM-201ENST00000328642 MAP6D1Q9H9H5 199 aa11.98□□□□□ -0.49
SYNM-201ENST00000328642 F5H768 121 aa11.98□□□□□ -0.49
SYNM-201ENST00000328642 SPINK8P0C7L1 97 aa11.98□□□□□ -0.49
SYNM-201ENST00000328642 TRBV6-1A0A0K0K1D8 114 aa11.97□□□□□ -0.49
SYNM-201ENST00000328642 H3BRM9 83 aa11.97□□□□□ -0.49
SYNM-201ENST00000328642 IGLV1-40P01703 118 aa11.97□□□□□ -0.49
SYNM-201ENST00000328642 ZNF493Q6ZR52 646 aa11.97□□□□□ -0.49
SYNM-201ENST00000328642 TIMM21Q9BVV7 248 aa11.97□□□□□ -0.49
SYNM-201ENST00000328642 NF1P21359 2839 aa11.97□□□□□ -0.49
SYNM-201ENST00000328642 C20orf78Q9BR46 151 aa11.97□□□□□ -0.49
SYNM-201ENST00000328642 TRBV25-1A0A075B6N4 114 aa11.97□□□□□ -0.49
SYNM-201ENST00000328642 UBE2V1Q13404 147 aa11.96□□□□□ -0.49
SYNM-201ENST00000328642 LYRM7Q5U5X0 104 aa11.96□□□□□ -0.49
SYNM-201ENST00000328642 C1QTNF4Q9BXJ3 329 aa11.96□□□□□ -0.49
SYNM-201ENST00000328642 NOTCH1P46531 2555 aa11.96□□□□□ -0.49
SYNM-201ENST00000328642 ODF1Q14990 250 aa11.96□□□□□ -0.5
SYNM-201ENST00000328642 LINC01549A6NIU2 74 aa11.95□□□□□ -0.5
SYNM-201ENST00000328642 H3BMM0 161 aa11.95□□□□□ -0.5
SYNM-201ENST00000328642 RNASE3P12724 160 aaKnown RBP11.95□□□□□ -0.5
SYNM-201ENST00000328642 COX6CP09669 75 aa11.95□□□□□ -0.5
SYNM-201ENST00000328642 LINC00158P58513 81 aa11.95□□□□□ -0.5
SYNM-201ENST00000328642 DEFB114Q30KQ6 69 aa11.95□□□□□ -0.5
SYNM-201ENST00000328642 Q6ZTI0 123 aa11.94□□□□□ -0.5
SYNM-201ENST00000328642 PRIMA1Q86XR5 153 aa11.94□□□□□ -0.5
SYNM-201ENST00000328642 LINC00482Q8N8I6 264 aa11.94□□□□□ -0.5
SYNM-201ENST00000328642 LINC01006Q8NI28 216 aa11.94□□□□□ -0.5
SYNM-201ENST00000328642 IGKV2D-26A0A0A0MRZ7 120 aa11.94□□□□□ -0.5
SYNM-201ENST00000328642 RPL13AP40429 203 aaKnown RBP11.94□□□□□ -0.5
SYNM-201ENST00000328642 DEFB135Q30KP9 77 aa11.94□□□□□ -0.5
SYNM-201ENST00000328642 DCANP1Q8TF63 244 aa11.94□□□□□ -0.5
SYNM-201ENST00000328642 SETXQ7Z333 2677 aaKnown RBP11.94□□□□□ -0.5
SYNM-201ENST00000328642 CELSR2Q9HCU4 2923 aa11.94□□□□□ -0.5
SYNM-201ENST00000328642 FXYD2P54710 66 aa11.94□□□□□ -0.5
SYNM-201ENST00000328642 MRAPQ8TCY5 172 aa11.94□□□□□ -0.5
SYNM-201ENST00000328642 SCRT2Q9NQ03 307 aa11.94□□□□□ -0.5
SYNM-201ENST00000328642 PFN2P35080 140 aa11.93□□□□□ -0.5
SYNM-201ENST00000328642 DAND5Q8N907 189 aa11.93□□□□□ -0.5
SYNM-201ENST00000328642 C4orf3Q8WVX3 66 aa11.93□□□□□ -0.5
SYNM-201ENST00000328642 MYMXA0A1B0GTQ4 84 aa11.93□□□□□ -0.5
SYNM-201ENST00000328642 C11orf86A6NJI1 115 aa11.93□□□□□ -0.5
SYNM-201ENST00000328642 RNASE8Q8TDE3 154 aaKnown RBP11.93□□□□□ -0.5
SYNM-201ENST00000328642 RHODO00212 210 aa11.92□□□□□ -0.5
SYNM-201ENST00000328642 STAB1Q9NY15 2570 aa11.92□□□□□ -0.5
SYNM-201ENST00000328642 SMAGPQ0VAQ4 97 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms