RNA–Protein interactions for RNA: ENST00000327154.10

RPAIN-201, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-201ENST00000327154 XKRY2A2RUG3 117 aa9.36□□□□□ -0.91
RPAIN-201ENST00000327154 ZNF727A8MUV8 499 aa9.36□□□□□ -0.91
RPAIN-201ENST00000327154 FAM229AH3BQW9 127 aa9.36□□□□□ -0.91
RPAIN-201ENST00000327154 LECT2O14960 151 aa9.36□□□□□ -0.91
RPAIN-201ENST00000327154 SNAI2O43623 268 aa9.36□□□□□ -0.91
RPAIN-201ENST00000327154 NDUFS6O75380 124 aaKnown RBP9.36□□□□□ -0.91
RPAIN-201ENST00000327154 RAB14P61106 215 aa9.36□□□□□ -0.91
RPAIN-201ENST00000327154 PEA15Q15121 130 aa9.36□□□□□ -0.91
RPAIN-201ENST00000327154 SPANXN1Q5VSR9 72 aa9.36□□□□□ -0.91
RPAIN-201ENST00000327154 NUDT10Q8NFP7 164 aa9.36□□□□□ -0.91
RPAIN-201ENST00000327154 NUDT11Q96G61 164 aa9.36□□□□□ -0.91
RPAIN-201ENST00000327154 RNASE7Q9H1E1 156 aaKnown RBP9.36□□□□□ -0.91
RPAIN-201ENST00000327154 OR5AL1P0C617 328 aa9.35□□□□□ -0.91
RPAIN-201ENST00000327154 SRSF3P84103 164 aaKnown RBP9.35□□□□□ -0.91
RPAIN-201ENST00000327154 FER1L6-AS1Q8NA97 138 aa9.35□□□□□ -0.91
RPAIN-201ENST00000327154 RPP21Q9H633 154 aaKnown RBP9.35□□□□□ -0.91
RPAIN-201ENST00000327154 URGCP-MRPS24S4R325 110 aa9.35□□□□□ -0.91
RPAIN-201ENST00000327154 C9JQL5 133 aa9.34□□□□□ -0.91
RPAIN-201ENST00000327154 NIT1Q86X76 327 aa9.34□□□□□ -0.91
RPAIN-201ENST00000327154 BAALCQ8WXS3 180 aa9.34□□□□□ -0.91
RPAIN-201ENST00000327154 DNAJC30Q96LL9 226 aa9.34□□□□□ -0.91
RPAIN-201ENST00000327154 SSBP4Q9BWG4 385 aaPredicted RBP9.34□□□□□ -0.91
RPAIN-201ENST00000327154 IGLC6P0CF74 106 aa9.33□□□□□ -0.92
RPAIN-201ENST00000327154 LINC01551Q86U37 167 aa9.33□□□□□ -0.92
RPAIN-201ENST00000327154 KLK12Q9UKR0 248 aa9.33□□□□□ -0.92
RPAIN-201ENST00000327154 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.32□□□□□ -0.92
RPAIN-201ENST00000327154 TRBV10-1A0A0K0K1A3 114 aa9.32□□□□□ -0.92
RPAIN-201ENST00000327154 GATCO43716 136 aaKnown RBP9.32□□□□□ -0.92
RPAIN-201ENST00000327154 RPL36AP83881 106 aaKnown RBP9.32□□□□□ -0.92
RPAIN-201ENST00000327154 RPL36ALQ969Q0 106 aaKnown RBP9.32□□□□□ -0.92
RPAIN-201ENST00000327154 COX11Q9Y6N1 276 aa9.32□□□□□ -0.92
RPAIN-201ENST00000327154 FAT1Q14517 4588 aa9.31□□□□□ -0.92
RPAIN-201ENST00000327154 SRRM2Q9UQ35 2752 aaKnown RBP9.31□□□□□ -0.92
RPAIN-201ENST00000327154 TRBV7-3A0A075B6L6 115 aa9.31□□□□□ -0.92
RPAIN-201ENST00000327154 IGKV2D-24A0A075B6R9 120 aa9.31□□□□□ -0.92
RPAIN-201ENST00000327154 A0A087WX48 190 aa9.31□□□□□ -0.92
RPAIN-201ENST00000327154 UBE2D3P61077 147 aa9.31□□□□□ -0.92
RPAIN-201ENST00000327154 UBE2D2P62837 147 aa9.31□□□□□ -0.92
RPAIN-201ENST00000327154 IFITM2Q01629 132 aa9.31□□□□□ -0.92
RPAIN-201ENST00000327154 ZNF56Q15929 161 aa9.31□□□□□ -0.92
RPAIN-201ENST00000327154 FAM74A3Q4VXF1 159 aa9.31□□□□□ -0.92
RPAIN-201ENST00000327154 LYZL1Q6UWQ5 148 aa9.31□□□□□ -0.92
RPAIN-201ENST00000327154 FAM231DQ6ZW35 169 aa9.31□□□□□ -0.92
RPAIN-201ENST00000327154 RMI2Q96E14 147 aa9.31□□□□□ -0.92
RPAIN-201ENST00000327154 AP1S3Q96PC3 154 aa9.31□□□□□ -0.92
RPAIN-201ENST00000327154 SMDT1Q9H4I9 107 aa9.31□□□□□ -0.92
RPAIN-201ENST00000327154 SMIM17P0DL12 118 aa9.3□□□□□ -0.92
RPAIN-201ENST00000327154 RAB4BP61018 213 aa9.3□□□□□ -0.92
RPAIN-201ENST00000327154 CACNG7P62955 275 aa9.3□□□□□ -0.92
RPAIN-201ENST00000327154 ADIRFQ15847 76 aa9.3□□□□□ -0.92
RPAIN-201ENST00000327154 TMEM241Q24JQ0 296 aa9.3□□□□□ -0.92
RPAIN-201ENST00000327154 CLLU1Q5K131 121 aa9.3□□□□□ -0.92
RPAIN-201ENST00000327154 UBE2WQ96B02 151 aa9.3□□□□□ -0.92
RPAIN-201ENST00000327154 TMEM262E9PQX1 116 aa9.29□□□□□ -0.92
RPAIN-201ENST00000327154 F2Z2F3 143 aa9.29□□□□□ -0.92
RPAIN-201ENST00000327154 CTRLP40313 264 aa9.29□□□□□ -0.92
RPAIN-201ENST00000327154 LINC01620Q4KN68 170 aa9.29□□□□□ -0.92
RPAIN-201ENST00000327154 KCNIP4Q6PIL6 250 aa9.29□□□□□ -0.92
RPAIN-201ENST00000327154 Q8N976 141 aa9.29□□□□□ -0.92
RPAIN-201ENST00000327154 NAT8Q9UHE5 227 aa9.29□□□□□ -0.92
RPAIN-201ENST00000327154 A8MWL6 223 aa9.28□□□□□ -0.92
RPAIN-201ENST00000327154 F5H697 171 aa9.28□□□□□ -0.92
RPAIN-201ENST00000327154 MGPP08493 103 aa9.28□□□□□ -0.92
RPAIN-201ENST00000327154 RPL23P62829 140 aaKnown RBP9.28□□□□□ -0.92
RPAIN-201ENST00000327154 ELOBQ15370 118 aa9.28□□□□□ -0.92
RPAIN-201ENST00000327154 Q6ZSA8 131 aa9.28□□□□□ -0.92
RPAIN-201ENST00000327154 NEXN-AS1Q8NBZ9 246 aa9.28□□□□□ -0.92
RPAIN-201ENST00000327154 OR10G8Q8NGN5 311 aa9.28□□□□□ -0.92
RPAIN-201ENST00000327154 ISOC2Q96AB3 205 aa9.28□□□□□ -0.92
RPAIN-201ENST00000327154 CHCHD7Q9BUK0 85 aa9.28□□□□□ -0.92
RPAIN-201ENST00000327154 VPS13BQ7Z7G8 4022 aa9.28□□□□□ -0.92
RPAIN-201ENST00000327154 HERC1Q15751 4861 aa9.27□□□□□ -0.93
RPAIN-201ENST00000327154 TRBV6-8A0A0A6YYG3 113 aa9.27□□□□□ -0.93
RPAIN-201ENST00000327154 NTF3P20783 257 aa9.27□□□□□ -0.93
RPAIN-201ENST00000327154 C15orf54Q8N8G6 183 aa9.27□□□□□ -0.93
RPAIN-201ENST00000327154 GTSF1Q8WW33 167 aa9.27□□□□□ -0.93
RPAIN-201ENST00000327154 PGLYRP4Q96LB8 373 aa9.27□□□□□ -0.93
RPAIN-201ENST00000327154 OSTCQ9NRP0 149 aa9.27□□□□□ -0.93
RPAIN-201ENST00000327154 DMBT1Q9UGM3 2413 aaPredicted RBP9.27□□□□□ -0.93
RPAIN-201ENST00000327154 FLG2Q5D862 2391 aaPredicted RBP9.27□□□□□ -0.93
RPAIN-201ENST00000327154 TRGC1P0CF51 173 aa9.26□□□□□ -0.93
RPAIN-201ENST00000327154 Q0VG73 95 aa9.26□□□□□ -0.93
RPAIN-201ENST00000327154 TWIST1Q15672 202 aa9.26□□□□□ -0.93
RPAIN-201ENST00000327154 CT83Q5H943 113 aa9.26□□□□□ -0.93
RPAIN-201ENST00000327154 ATRAIDQ6UW56 229 aa9.25□□□□□ -0.93
RPAIN-201ENST00000327154 ENHOQ6UWT2 76 aa9.25□□□□□ -0.93
RPAIN-201ENST00000327154 TSKUQ8WUA8 353 aa9.25□□□□□ -0.93
RPAIN-201ENST00000327154 KIF25-AS1Q9Y6Z4 181 aa9.25□□□□□ -0.93
RPAIN-201ENST00000327154 PLA2G1BP04054 148 aaKnown RBP9.24□□□□□ -0.93
RPAIN-201ENST00000327154 WDR73Q6P4I2 378 aa9.24□□□□□ -0.93
RPAIN-201ENST00000327154 LINC00528Q8N1L1 170 aa9.24□□□□□ -0.93
RPAIN-201ENST00000327154 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.24□□□□□ -0.93
RPAIN-201ENST00000327154 BORCS7Q96B45 105 aa9.24□□□□□ -0.93
RPAIN-201ENST00000327154 CHCHD5Q9BSY4 110 aa9.24□□□□□ -0.93
RPAIN-201ENST00000327154 CNFNQ9BYD5 112 aa9.24□□□□□ -0.93
RPAIN-201ENST00000327154 V9GYV3 84 aa9.24□□□□□ -0.93
RPAIN-201ENST00000327154 HIGD1CA8MV81 97 aa9.23□□□□□ -0.93
RPAIN-201ENST00000327154 ANGP03950 147 aaKnown RBP9.23□□□□□ -0.93
RPAIN-201ENST00000327154 MPV17L2Q567V2 206 aa9.23□□□□□ -0.93
RPAIN-201ENST00000327154 NTM-AS1Q6ZSK4 140 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms