RNA–Protein interactions for RNA: ENST00000326956.11

SSBP3-201, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 2,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-201ENST00000326956 Q8N1Y9 231 aa10.87□□□□□ -0.67
SSBP3-201ENST00000326956 C20orf203Q8NBC4 194 aa10.87□□□□□ -0.67
SSBP3-201ENST00000326956 SPXQ9BT56 116 aa10.87□□□□□ -0.67
SSBP3-201ENST00000326956 ASH1LQ9NR48 2969 aaKnown RBP10.87□□□□□ -0.67
SSBP3-201ENST00000326956 A0A0B4J2C4 111 aa10.86□□□□□ -0.67
SSBP3-201ENST00000326956 K7EMT4 169 aa10.86□□□□□ -0.67
SSBP3-201ENST00000326956 BRI3O95415 125 aa10.86□□□□□ -0.67
SSBP3-201ENST00000326956 PRSS2P07478 247 aa10.86□□□□□ -0.67
SSBP3-201ENST00000326956 IGHV4-38-2P0DP08 117 aa10.86□□□□□ -0.67
SSBP3-201ENST00000326956 ZNF22P17026 224 aaPredicted RBP10.86□□□□□ -0.67
SSBP3-201ENST00000326956 EDN2P20800 178 aa10.86□□□□□ -0.67
SSBP3-201ENST00000326956 ATXN8Q156A1 80 aa10.86□□□□□ -0.67
SSBP3-201ENST00000326956 DCANP1Q8TF63 244 aa10.86□□□□□ -0.67
SSBP3-201ENST00000326956 C9orf85Q96MD7 179 aa10.86□□□□□ -0.67
SSBP3-201ENST00000326956 ANAPC13Q9BS18 74 aa10.86□□□□□ -0.67
SSBP3-201ENST00000326956 IGHV1OR15-1A0A075B7D0 117 aa10.86□□□□□ -0.67
SSBP3-201ENST00000326956 IGHV4-39P01824 125 aa10.86□□□□□ -0.67
SSBP3-201ENST00000326956 TMEM263Q8WUH6 116 aaKnown RBP10.86□□□□□ -0.67
SSBP3-201ENST00000326956 PIMREGQ9BSJ6 248 aa10.85□□□□□ -0.67
SSBP3-201ENST00000326956 SVEP1Q4LDE5 3571 aa10.85□□□□□ -0.67
SSBP3-201ENST00000326956 SPINK13Q1W4C9 94 aa10.85□□□□□ -0.67
SSBP3-201ENST00000326956 A6NDX4 124 aa10.85□□□□□ -0.67
SSBP3-201ENST00000326956 SNCGO76070 127 aa10.84□□□□□ -0.67
SSBP3-201ENST00000326956 CD28P10747 220 aa10.84□□□□□ -0.67
SSBP3-201ENST00000326956 SORL1Q92673 2214 aa10.84□□□□□ -0.67
SSBP3-201ENST00000326956 M0R2P5 195 aa10.84□□□□□ -0.67
SSBP3-201ENST00000326956 P0DMU3 169 aa10.84□□□□□ -0.67
SSBP3-201ENST00000326956 FAM231AP0DMU4 169 aa10.84□□□□□ -0.67
SSBP3-201ENST00000326956 FAM231CP0DMU5 169 aa10.84□□□□□ -0.67
SSBP3-201ENST00000326956 NTN5Q8WTR8 489 aaPredicted RBP10.84□□□□□ -0.67
SSBP3-201ENST00000326956 TIMM21Q9BVV7 248 aa10.84□□□□□ -0.67
SSBP3-201ENST00000326956 IGLV4-3A0A075B6K6 122 aa10.83□□□□□ -0.68
SSBP3-201ENST00000326956 IGHV4-61A0A0C4DH41 118 aa10.83□□□□□ -0.68
SSBP3-201ENST00000326956 A0A0J9YX75 114 aa10.83□□□□□ -0.68
SSBP3-201ENST00000326956 IGLV1-40P01703 118 aa10.83□□□□□ -0.68
SSBP3-201ENST00000326956 HTN1P15515 57 aa10.83□□□□□ -0.68
SSBP3-201ENST00000326956 LINC01620Q4KN68 170 aa10.83□□□□□ -0.68
SSBP3-201ENST00000326956 RNF183Q96D59 192 aa10.83□□□□□ -0.68
SSBP3-201ENST00000326956 ODF3Q96PU9 254 aa10.83□□□□□ -0.68
SSBP3-201ENST00000326956 A0A0J9YXY3 114 aa10.82□□□□□ -0.68
SSBP3-201ENST00000326956 ADARB2-AS1A8MUL3 147 aa10.82□□□□□ -0.68
SSBP3-201ENST00000326956 CREBBPQ92793 2442 aa10.82□□□□□ -0.68
SSBP3-201ENST00000326956 M0QXV9 152 aa10.81□□□□□ -0.68
SSBP3-201ENST00000326956 GAGE2BQ13066 116 aa10.81□□□□□ -0.68
SSBP3-201ENST00000326956 GAGE2EQ4V326 116 aa10.81□□□□□ -0.68
SSBP3-201ENST00000326956 GAGE2DQ9UEU5 116 aa10.81□□□□□ -0.68
SSBP3-201ENST00000326956 TRGV11A0A075B6L2 103 aa10.81□□□□□ -0.68
SSBP3-201ENST00000326956 COX6CP09669 75 aa10.81□□□□□ -0.68
SSBP3-201ENST00000326956 IGHV3-30-3P0DP02 117 aa10.81□□□□□ -0.68
SSBP3-201ENST00000326956 ZNF580Q9UK33 172 aa10.8□□□□□ -0.68
SSBP3-201ENST00000326956 IGHV3-73A0A0B4J1V6 119 aa10.8□□□□□ -0.68
SSBP3-201ENST00000326956 EIF4EBP3O60516 100 aaPredicted RBP10.8□□□□□ -0.68
SSBP3-201ENST00000326956 ABCA2Q9BZC7 2435 aa10.8□□□□□ -0.68
SSBP3-201ENST00000326956 CSPG4Q6UVK1 2322 aa10.8□□□□□ -0.68
SSBP3-201ENST00000326956 TNFRSF18Q9Y5U5 241 aa10.79□□□□□ -0.68
SSBP3-201ENST00000326956 TRAV8-4A0A0B4J246 113 aa10.79□□□□□ -0.68
SSBP3-201ENST00000326956 PRRC2AP48634 2157 aaKnown RBP10.79□□□□□ -0.68
SSBP3-201ENST00000326956 NDUFA12Q9UI09 145 aa10.78□□□□□ -0.68
SSBP3-201ENST00000326956 SPG11Q96JI7 2443 aa10.78□□□□□ -0.68
SSBP3-201ENST00000326956 TRAV8-3A0A0A6YYJ7 113 aa10.78□□□□□ -0.68
SSBP3-201ENST00000326956 TRBV30A0A0K0K1B3 111 aa10.78□□□□□ -0.68
SSBP3-201ENST00000326956 TRBV10-2A0A0K0K1G8 114 aa10.78□□□□□ -0.68
SSBP3-201ENST00000326956 TTC32Q5I0X7 151 aa10.78□□□□□ -0.68
SSBP3-201ENST00000326956 C2orf82Q6UX34 121 aa10.78□□□□□ -0.68
SSBP3-201ENST00000326956 H3BMM0 161 aa10.78□□□□□ -0.68
SSBP3-201ENST00000326956 K7EQG2 157 aa10.78□□□□□ -0.68
SSBP3-201ENST00000326956 TRIAP1O43715 76 aa10.78□□□□□ -0.68
SSBP3-201ENST00000326956 UBE2WQ96B02 151 aa10.78□□□□□ -0.68
SSBP3-201ENST00000326956 ELANEP08246 267 aa10.77□□□□□ -0.69
SSBP3-201ENST00000326956 RNASE13Q5GAN3 156 aaKnown RBP10.77□□□□□ -0.69
SSBP3-201ENST00000326956 SHISA2Q6UWI4 295 aa10.77□□□□□ -0.69
SSBP3-201ENST00000326956 TEX49A0A1B0GTD5 131 aa10.77□□□□□ -0.69
SSBP3-201ENST00000326956 NPC2P61916 151 aa10.77□□□□□ -0.69
SSBP3-201ENST00000326956 PYGO1Q9Y3Y4 419 aa10.77□□□□□ -0.69
SSBP3-201ENST00000326956 DOPEY2Q9Y3R5 2298 aa10.76□□□□□ -0.69
SSBP3-201ENST00000326956 C19orf84I3L1E1 186 aa10.76□□□□□ -0.69
SSBP3-201ENST00000326956 SYNJ2BPP57105 145 aa10.76□□□□□ -0.69
SSBP3-201ENST00000326956 CEMP1Q6PRD7 247 aaPredicted RBP10.76□□□□□ -0.69
SSBP3-201ENST00000326956 ICOSQ9Y6W8 199 aa10.76□□□□□ -0.69
SSBP3-201ENST00000326956 IGHV1-58A0A0C4DH39 117 aa10.76□□□□□ -0.69
SSBP3-201ENST00000326956 CCL19Q99731 98 aa10.76□□□□□ -0.69
SSBP3-201ENST00000326956 LY6DQ14210 128 aa10.75□□□□□ -0.69
SSBP3-201ENST00000326956 C10orf105Q8TEF2 133 aa10.75□□□□□ -0.69
SSBP3-201ENST00000326956 CITED1Q99966 193 aa10.75□□□□□ -0.69
SSBP3-201ENST00000326956 MSMBP08118 114 aa10.75□□□□□ -0.69
SSBP3-201ENST00000326956 ATP5J2P56134 94 aa10.75□□□□□ -0.69
SSBP3-201ENST00000326956 MRPS36P82909 103 aaKnown RBP10.75□□□□□ -0.69
SSBP3-201ENST00000326956 CFHR3Q02985 330 aa10.75□□□□□ -0.69
SSBP3-201ENST00000326956 GAGE5Q13069 117 aa10.75□□□□□ -0.69
SSBP3-201ENST00000326956 GAGE6Q13070 117 aa10.75□□□□□ -0.69
SSBP3-201ENST00000326956 PSMB8P28062 276 aa10.74□□□□□ -0.69
SSBP3-201ENST00000326956 TRAV4A0A0B4J268 109 aa10.74□□□□□ -0.69
SSBP3-201ENST00000326956 DUX5Q96PT3 197 aa10.74□□□□□ -0.69
SSBP3-201ENST00000326956 YAE1D1Q9NRH1 226 aa10.74□□□□□ -0.69
SSBP3-201ENST00000326956 KNCNA6PVL3 124 aa10.74□□□□□ -0.69
SSBP3-201ENST00000326956 GATA3P23771 443 aa10.73□□□□□ -0.69
SSBP3-201ENST00000326956 RPL13AP40429 203 aaKnown RBP10.73□□□□□ -0.69
SSBP3-201ENST00000326956 C10orf99Q6UWK7 81 aa10.73□□□□□ -0.69
SSBP3-201ENST00000326956 PROK1P58294 105 aa10.73□□□□□ -0.69
SSBP3-201ENST00000326956 MIAQ16674 131 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms