RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 THAP8Q8NA92 274 aa7.84□□□□□ -1.15
SF3B2-201ENST00000322535 NDUFB3O43676 98 aa7.83□□□□□ -1.16
SF3B2-201ENST00000322535 ZNF80P51504 273 aaPredicted RBP7.83□□□□□ -1.16
SF3B2-201ENST00000322535 TMEM170BQ5T4T1 132 aa7.83□□□□□ -1.16
SF3B2-201ENST00000322535 NEXN-AS1Q8NBZ9 246 aa7.83□□□□□ -1.16
SF3B2-201ENST00000322535 EEF1AKMT3Q96AZ1 226 aa7.83□□□□□ -1.16
SF3B2-201ENST00000322535 S4R3C0 116 aa7.83□□□□□ -1.16
SF3B2-201ENST00000322535 KMT2BQ9UMN6 2715 aaPredicted RBP7.83□□□□□ -1.16
SF3B2-201ENST00000322535 TEX15Q9BXT5 2789 aa7.82□□□□□ -1.16
SF3B2-201ENST00000322535 TRBV19A0A075B6N1 114 aa7.82□□□□□ -1.16
SF3B2-201ENST00000322535 IGHV3-72A0A0B4J1Y9 119 aa7.82□□□□□ -1.16
SF3B2-201ENST00000322535 CGB1A6NKQ9 187 aa7.82□□□□□ -1.16
SF3B2-201ENST00000322535 SONP18583 2426 aaKnown RBP7.82□□□□□ -1.16
SF3B2-201ENST00000322535 ATXN8Q156A1 80 aa7.82□□□□□ -1.16
SF3B2-201ENST00000322535 C6orf226Q5I0X4 101 aa7.82□□□□□ -1.16
SF3B2-201ENST00000322535 A0A0J9YY99 117 aa7.82□□□□□ -1.16
SF3B2-201ENST00000322535 TRBV10-2A0A0K0K1G8 114 aa7.82□□□□□ -1.16
SF3B2-201ENST00000322535 COX7A1P24310 79 aa7.82□□□□□ -1.16
SF3B2-201ENST00000322535 FAM19A1Q7Z5A9 133 aa7.82□□□□□ -1.16
SF3B2-201ENST00000322535 UPK3BQ9BT76 320 aa7.82□□□□□ -1.16
SF3B2-201ENST00000322535 FAM240AA0A1B0GVK7 77 aa7.81□□□□□ -1.16
SF3B2-201ENST00000322535 SPRY2O43597 315 aa7.81□□□□□ -1.16
SF3B2-201ENST00000322535 C14orf178Q8N769 122 aaPredicted RBP7.81□□□□□ -1.16
SF3B2-201ENST00000322535 IGHV3-64A0A075B6Q5 118 aa7.81□□□□□ -1.16
SF3B2-201ENST00000322535 EIF4EBP3O60516 100 aaPredicted RBP7.81□□□□□ -1.16
SF3B2-201ENST00000322535 C11orf71Q6IPW1 123 aa7.81□□□□□ -1.16
SF3B2-201ENST00000322535 BRK1Q8WUW1 75 aa7.81□□□□□ -1.16
SF3B2-201ENST00000322535 ACANP16112 2415 aa7.81□□□□□ -1.16
SF3B2-201ENST00000322535 TMEM89A2RUT3 159 aa7.8□□□□□ -1.16
SF3B2-201ENST00000322535 IGHV3-30P01768 117 aa7.8□□□□□ -1.16
SF3B2-201ENST00000322535 CGB3P0DN86 165 aa7.8□□□□□ -1.16
SF3B2-201ENST00000322535 CGB7P0DN87 165 aa7.8□□□□□ -1.16
SF3B2-201ENST00000322535 IGHV3-30-5P0DP03 117 aa7.8□□□□□ -1.16
SF3B2-201ENST00000322535 METTL26Q96S19 204 aa7.8□□□□□ -1.16
SF3B2-201ENST00000322535 ATP5G1P05496 136 aa7.8□□□□□ -1.16
SF3B2-201ENST00000322535 HOXB4P17483 251 aaPredicted RBP7.8□□□□□ -1.16
SF3B2-201ENST00000322535 C16orf92Q96LL3 132 aa7.8□□□□□ -1.16
SF3B2-201ENST00000322535 C16orf95Q9H693 158 aa7.8□□□□□ -1.16
SF3B2-201ENST00000322535 IGHV3-33P01772 117 aa7.79□□□□□ -1.16
SF3B2-201ENST00000322535 CIRBPQ14011 172 aaKnown RBP7.79□□□□□ -1.16
SF3B2-201ENST00000322535 ABCA2Q9BZC7 2435 aa7.79□□□□□ -1.16
SF3B2-201ENST00000322535 IGLV2-18A0A075B6J9 118 aa7.79□□□□□ -1.16
SF3B2-201ENST00000322535 MAPK1IP1LQ8NDC0 245 aa7.79□□□□□ -1.16
SF3B2-201ENST00000322535 BPESC1Q9GZL8 116 aa7.79□□□□□ -1.16
SF3B2-201ENST00000322535 LINC01559Q495D7 138 aa7.79□□□□□ -1.16
SF3B2-201ENST00000322535 CLEC2BQ92478 149 aa7.79□□□□□ -1.16
SF3B2-201ENST00000322535 TP53TG1Q9Y2A0 90 aa7.79□□□□□ -1.16
SF3B2-201ENST00000322535 MXRA5Q9NR99 2828 aa7.78□□□□□ -1.16
SF3B2-201ENST00000322535 PRRC2AP48634 2157 aaKnown RBP7.78□□□□□ -1.16
SF3B2-201ENST00000322535 IGHV3OR16-8A0A075B7F1 116 aa7.78□□□□□ -1.16
SF3B2-201ENST00000322535 H7C423 109 aa7.78□□□□□ -1.16
SF3B2-201ENST00000322535 ZNF561-AS1K7EIQ3 104 aa7.78□□□□□ -1.16
SF3B2-201ENST00000322535 ZFP36P26651 326 aaKnown RBP7.78□□□□□ -1.16
SF3B2-201ENST00000322535 TSPEAR-AS2P59090 65 aa7.78□□□□□ -1.16
SF3B2-201ENST00000322535 KRTAP10-9P60411 292 aa7.78□□□□□ -1.16
SF3B2-201ENST00000322535 Q96MF0 132 aa7.78□□□□□ -1.16
SF3B2-201ENST00000322535 C11orf86A6NJI1 115 aa7.77□□□□□ -1.17
SF3B2-201ENST00000322535 COX6B1P14854 86 aa7.77□□□□□ -1.17
SF3B2-201ENST00000322535 NPC2P61916 151 aa7.77□□□□□ -1.17
SF3B2-201ENST00000322535 PLGLAQ15195 96 aa7.77□□□□□ -1.17
SF3B2-201ENST00000322535 C5orf38Q86SI9 138 aa7.77□□□□□ -1.17
SF3B2-201ENST00000322535 LINC01600Q96MT4 127 aa7.77□□□□□ -1.17
SF3B2-201ENST00000322535 IGHV3OR16-10A0A075B7F0 116 aa7.77□□□□□ -1.17
SF3B2-201ENST00000322535 TRAV8-3A0A0A6YYJ7 113 aa7.77□□□□□ -1.17
SF3B2-201ENST00000322535 ATOX1O00244 68 aa7.77□□□□□ -1.17
SF3B2-201ENST00000322535 TRIAP1O43715 76 aa7.77□□□□□ -1.17
SF3B2-201ENST00000322535 PRSS2P07478 247 aa7.77□□□□□ -1.17
SF3B2-201ENST00000322535 ERCC8Q13216 396 aa7.77□□□□□ -1.17
SF3B2-201ENST00000322535 PRIMA1Q86XR5 153 aa7.77□□□□□ -1.17
SF3B2-201ENST00000322535 CREBBPQ92793 2442 aa7.77□□□□□ -1.17
SF3B2-201ENST00000322535 TRAV12-3A0A0B4J271 114 aa7.76□□□□□ -1.17
SF3B2-201ENST00000322535 MUSTN1Q8IVN3 82 aa7.76□□□□□ -1.17
SF3B2-201ENST00000322535 HIST1H4AP62805 103 aaKnown RBP7.76□□□□□ -1.17
SF3B2-201ENST00000322535 FHL2Q14192 279 aa7.76□□□□□ -1.17
SF3B2-201ENST00000322535 SPANXN1Q5VSR9 72 aa7.76□□□□□ -1.17
SF3B2-201ENST00000322535 C2orf66Q6UXQ4 117 aa7.76□□□□□ -1.17
SF3B2-201ENST00000322535 CCL19Q99731 98 aa7.76□□□□□ -1.17
SF3B2-201ENST00000322535 TRBV7-1A0A0A6YYK4 115 aa7.75□□□□□ -1.17
SF3B2-201ENST00000322535 TRAV12-1A0A0B4J245 112 aa7.75□□□□□ -1.17
SF3B2-201ENST00000322535 LINC01546A6NGU7 62 aa7.75□□□□□ -1.17
SF3B2-201ENST00000322535 IGHV1-8P0DP01 117 aa7.75□□□□□ -1.17
SF3B2-201ENST00000322535 Q6ZSV7 163 aa7.75□□□□□ -1.17
SF3B2-201ENST00000322535 LINC00643Q86TS7 51 aa7.75□□□□□ -1.17
SF3B2-201ENST00000322535 NRACQ8N912 160 aa7.75□□□□□ -1.17
SF3B2-201ENST00000322535 TMEM14CQ9P0S9 112 aa7.75□□□□□ -1.17
SF3B2-201ENST00000322535 SETD2Q9BYW2 2564 aaPredicted RBP7.75□□□□□ -1.17
SF3B2-201ENST00000322535 RHOHQ15669 191 aa7.75□□□□□ -1.17
SF3B2-201ENST00000322535 DEFB121Q5J5C9 76 aa7.75□□□□□ -1.17
SF3B2-201ENST00000322535 SLC25A29Q8N8R3 303 aa7.75□□□□□ -1.17
SF3B2-201ENST00000322535 TMEM167AQ8TBQ9 72 aa7.75□□□□□ -1.17
SF3B2-201ENST00000322535 FLNBO75369 2602 aaKnown RBP7.75□□□□□ -1.17
SF3B2-201ENST00000322535 TRBV6-1A0A0K0K1D8 114 aa7.75□□□□□ -1.17
SF3B2-201ENST00000322535 P0DMU3 169 aa7.75□□□□□ -1.17
SF3B2-201ENST00000322535 FAM231AP0DMU4 169 aa7.75□□□□□ -1.17
SF3B2-201ENST00000322535 FAM231CP0DMU5 169 aa7.75□□□□□ -1.17
SF3B2-201ENST00000322535 LGALS3P17931 250 aaKnown RBP7.75□□□□□ -1.17
SF3B2-201ENST00000322535 FP248Q71RG6 208 aaPredicted RBP7.75□□□□□ -1.17
SF3B2-201ENST00000322535 TMEM263Q8WUH6 116 aaKnown RBP7.75□□□□□ -1.17
SF3B2-201ENST00000322535 NF1P21359 2839 aa7.75□□□□□ -1.17
SF3B2-201ENST00000322535 ADARB2-AS1A8MUL3 147 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms