RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 MED14OSP0DP75 135 aa5.48□□□□□ -1.53
SMC1A-201ENST00000322213 NBL1P41271 181 aa5.48□□□□□ -1.53
SMC1A-201ENST00000322213 MLST8Q9BVC4 326 aa5.48□□□□□ -1.53
SMC1A-201ENST00000322213 MDFICQ9P1T7 246 aa5.48□□□□□ -1.53
SMC1A-201ENST00000322213 A0A0U1RQV1 116 aa5.48□□□□□ -1.53
SMC1A-201ENST00000322213 SEC61GP60059 68 aa5.48□□□□□ -1.53
SMC1A-201ENST00000322213 CDIP1Q9H305 208 aa5.48□□□□□ -1.53
SMC1A-201ENST00000322213 SDIM1Q6ZPB5 146 aa5.47□□□□□ -1.53
SMC1A-201ENST00000322213 LINC00526Q96FQ7 95 aa5.47□□□□□ -1.53
SMC1A-201ENST00000322213 PDE6GP18545 87 aa5.47□□□□□ -1.53
SMC1A-201ENST00000322213 TRAV4A0A0B4J268 109 aa5.47□□□□□ -1.53
SMC1A-201ENST00000322213 IGLV1-44P01699 117 aa5.47□□□□□ -1.53
SMC1A-201ENST00000322213 RNASE13Q5GAN3 156 aaKnown RBP5.47□□□□□ -1.53
SMC1A-201ENST00000322213 IGHV3OR16-10A0A075B7F0 116 aa5.47□□□□□ -1.53
SMC1A-201ENST00000322213 PFN2P35080 140 aa5.47□□□□□ -1.53
SMC1A-201ENST00000322213 LYPD2Q6UXB3 125 aa5.47□□□□□ -1.53
SMC1A-201ENST00000322213 I3L2K1 104 aa5.47□□□□□ -1.53
SMC1A-201ENST00000322213 IGHV3-30P01768 117 aa5.47□□□□□ -1.53
SMC1A-201ENST00000322213 IGHV3-30-5P0DP03 117 aa5.47□□□□□ -1.53
SMC1A-201ENST00000322213 LINC01560Q8TB33 94 aa5.47□□□□□ -1.53
SMC1A-201ENST00000322213 COX7A2LO14548 114 aa5.47□□□□□ -1.53
SMC1A-201ENST00000322213 CMC4P56277 68 aaPredicted RBP5.47□□□□□ -1.53
SMC1A-201ENST00000322213 MRPS36P82909 103 aaKnown RBP5.47□□□□□ -1.53
SMC1A-201ENST00000322213 C11orf53Q8IXP5 236 aa5.47□□□□□ -1.53
SMC1A-201ENST00000322213 MSRB2Q9Y3D2 182 aa5.47□□□□□ -1.53
SMC1A-201ENST00000322213 MBD3L4A6NDZ8 208 aaPredicted RBP5.47□□□□□ -1.53
SMC1A-201ENST00000322213 MBD3L3A6NE82 208 aaPredicted RBP5.47□□□□□ -1.53
SMC1A-201ENST00000322213 MBD3L5A6NJ08 208 aaPredicted RBP5.47□□□□□ -1.53
SMC1A-201ENST00000322213 TRIAP1O43715 76 aa5.47□□□□□ -1.53
SMC1A-201ENST00000322213 RPL39P62891 51 aaKnown RBP5.47□□□□□ -1.53
SMC1A-201ENST00000322213 HRCT1Q6UXD1 115 aa5.47□□□□□ -1.53
SMC1A-201ENST00000322213 MBD3L2Q8NHZ7 208 aaPredicted RBP5.47□□□□□ -1.53
SMC1A-201ENST00000322213 LRBAP50851 2863 aa5.46□□□□□ -1.53
SMC1A-201ENST00000322213 ATP6V0E1O15342 81 aa5.46□□□□□ -1.53
SMC1A-201ENST00000322213 GATA3P23771 443 aa5.46□□□□□ -1.53
SMC1A-201ENST00000322213 EIF4EBP1Q13541 118 aaPredicted RBP5.46□□□□□ -1.53
SMC1A-201ENST00000322213 PATE2Q6UY27 113 aa5.46□□□□□ -1.53
SMC1A-201ENST00000322213 FGF23Q9GZV9 251 aaPredicted RBP5.46□□□□□ -1.53
SMC1A-201ENST00000322213 SPINK13Q1W4C9 94 aa5.46□□□□□ -1.53
SMC1A-201ENST00000322213 CDK2AP2O75956 126 aa5.46□□□□□ -1.54
SMC1A-201ENST00000322213 SAA4P35542 130 aa5.46□□□□□ -1.54
SMC1A-201ENST00000322213 DAZ2Q13117 558 aaKnown RBP5.46□□□□□ -1.54
SMC1A-201ENST00000322213 DAZ4Q86SG3 579 aaKnown RBP5.46□□□□□ -1.54
SMC1A-201ENST00000322213 C14orf132Q9NPU4 83 aa5.46□□□□□ -1.54
SMC1A-201ENST00000322213 DAZ3Q9NR90 486 aaKnown RBP5.46□□□□□ -1.54
SMC1A-201ENST00000322213 KLK9Q9UKQ9 250 aa5.46□□□□□ -1.54
SMC1A-201ENST00000322213 IGKV2D-26A0A0A0MRZ7 120 aa5.46□□□□□ -1.54
SMC1A-201ENST00000322213 IGHV1-58A0A0C4DH39 117 aa5.46□□□□□ -1.54
SMC1A-201ENST00000322213 IGKV1-17P01599 117 aa5.46□□□□□ -1.54
SMC1A-201ENST00000322213 SPRY4Q9C004 299 aa5.46□□□□□ -1.54
SMC1A-201ENST00000322213 HECTD1Q9ULT8 2610 aa5.46□□□□□ -1.54
SMC1A-201ENST00000322213 SND1-IT1Q9HBX3 110 aa5.46□□□□□ -1.54
SMC1A-201ENST00000322213 UBR5O95071 2799 aaPredicted RBP5.46□□□□□ -1.54
SMC1A-201ENST00000322213 K7EIM0 57 aa5.46□□□□□ -1.54
SMC1A-201ENST00000322213 TEX22C9J3V5 150 aa5.45□□□□□ -1.54
SMC1A-201ENST00000322213 KAAG1Q9UBP8 84 aa5.45□□□□□ -1.54
SMC1A-201ENST00000322213 RPL18AQ02543 176 aaKnown RBP5.45□□□□□ -1.54
SMC1A-201ENST00000322213 TRAV23DV6A0A075B6W5 121 aa5.45□□□□□ -1.54
SMC1A-201ENST00000322213 ZNF672Q499Z4 452 aaPredicted RBP5.45□□□□□ -1.54
SMC1A-201ENST00000322213 LINC00322Q6ZN03 302 aaPredicted RBP5.45□□□□□ -1.54
SMC1A-201ENST00000322213 U3KQE9 123 aa5.45□□□□□ -1.54
SMC1A-201ENST00000322213 UTP20O75691 2785 aaKnown RBP5.45□□□□□ -1.54
SMC1A-201ENST00000322213 NPBQ8NG41 125 aa5.45□□□□□ -1.54
SMC1A-201ENST00000322213 LOXL1Q08397 574 aaPredicted RBP5.45□□□□□ -1.54
SMC1A-201ENST00000322213 CRIP3Q6Q6R5 217 aa5.45□□□□□ -1.54
SMC1A-201ENST00000322213 Q6ZPA2 131 aa5.45□□□□□ -1.54
SMC1A-201ENST00000322213 DAND5Q8N907 189 aa5.45□□□□□ -1.54
SMC1A-201ENST00000322213 RNF138Q8WVD3 245 aa5.45□□□□□ -1.54
SMC1A-201ENST00000322213 MSRB1Q9NZV6 116 aa5.45□□□□□ -1.54
SMC1A-201ENST00000322213 IGHV3-30-3P0DP02 117 aa5.44□□□□□ -1.54
SMC1A-201ENST00000322213 FUSP35637 526 aaKnown RBP eCLIP5.44□□□□□ -1.54
SMC1A-201ENST00000322213 AGPAT4-IT1Q9H0P7 198 aa5.44□□□□□ -1.54
SMC1A-201ENST00000322213 MRPL36Q9P0J6 103 aaKnown RBP5.44□□□□□ -1.54
SMC1A-201ENST00000322213 UNC79Q9P2D8 2635 aa5.44□□□□□ -1.54
SMC1A-201ENST00000322213 DIAPH2-AS1Q14236 149 aa5.44□□□□□ -1.54
SMC1A-201ENST00000322213 NFE4Q86UQ8 179 aa5.44□□□□□ -1.54
SMC1A-201ENST00000322213 C7orf69Q9H7B7 122 aa5.44□□□□□ -1.54
SMC1A-201ENST00000322213 IGHV7-4-1A0A0J9YVY3 117 aa5.44□□□□□ -1.54
SMC1A-201ENST00000322213 WI2-2373I1.2A0A1W2PRP0 233 aa5.44□□□□□ -1.54
SMC1A-201ENST00000322213 GNRH2O43555 120 aa5.44□□□□□ -1.54
SMC1A-201ENST00000322213 C10orf105Q8TEF2 133 aa5.44□□□□□ -1.54
SMC1A-201ENST00000322213 OPRPNQ99935 248 aaPredicted RBP5.44□□□□□ -1.54
SMC1A-201ENST00000322213 IGHV3-33P01772 117 aa5.44□□□□□ -1.54
SMC1A-201ENST00000322213 COX7B2Q8TF08 81 aa5.44□□□□□ -1.54
SMC1A-201ENST00000322213 COL6A5A8TX70 2615 aa5.44□□□□□ -1.54
SMC1A-201ENST00000322213 TRAV12-2A0A075B6T6 113 aa5.43□□□□□ -1.54
SMC1A-201ENST00000322213 A0A0J9YY99 117 aa5.43□□□□□ -1.54
SMC1A-201ENST00000322213 UBE2D3P61077 147 aa5.43□□□□□ -1.54
SMC1A-201ENST00000322213 UBE2D2P62837 147 aa5.43□□□□□ -1.54
SMC1A-201ENST00000322213 NSUN5P1Q3KNT7 163 aa5.43□□□□□ -1.54
SMC1A-201ENST00000322213 IGLV2-23P01705 113 aa5.43□□□□□ -1.54
SMC1A-201ENST00000322213 IGLV11-55A0A075B6I3 123 aa5.43□□□□□ -1.54
SMC1A-201ENST00000322213 IGLV3-9A0A075B6K5 115 aa5.43□□□□□ -1.54
SMC1A-201ENST00000322213 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.43□□□□□ -1.54
SMC1A-201ENST00000322213 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.43□□□□□ -1.54
SMC1A-201ENST00000322213 IGKV2-29A2NJV5 120 aaPredicted RBP5.43□□□□□ -1.54
SMC1A-201ENST00000322213 UBE2E1P51965 193 aa5.43□□□□□ -1.54
SMC1A-201ENST00000322213 IGKV1D-37A0A075B6S9 117 aa5.43□□□□□ -1.54
SMC1A-201ENST00000322213 A0A0G2JNJ9 132 aa5.43□□□□□ -1.54
SMC1A-201ENST00000322213 A0A0J9YXY3 114 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms