RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 TRAV12-3A0A0B4J271 114 aa13.35□□□□□ -0.27
PRKCB-202ENST00000321728 ZNF56Q15929 161 aa13.35□□□□□ -0.27
PRKCB-202ENST00000321728 K7ENP7 123 aa13.34□□□□□ -0.27
PRKCB-202ENST00000321728 NPFFO15130 113 aa13.34□□□□□ -0.27
PRKCB-202ENST00000321728 FBXL19-AS1Q494R0 122 aa13.34□□□□□ -0.27
PRKCB-202ENST00000321728 TRAV8-4A0A0B4J246 113 aa13.34□□□□□ -0.27
PRKCB-202ENST00000321728 ZNF22P17026 224 aaPredicted RBP13.33□□□□□ -0.28
PRKCB-202ENST00000321728 RHPN1-AS1Q9BWJ2 59 aa13.33□□□□□ -0.28
PRKCB-202ENST00000321728 ZNF580Q9UK33 172 aa13.33□□□□□ -0.28
PRKCB-202ENST00000321728 CELSR2Q9HCU4 2923 aa13.33□□□□□ -0.28
PRKCB-202ENST00000321728 IFITM1P13164 125 aa13.33□□□□□ -0.28
PRKCB-202ENST00000321728 TRBV7-9A0A0J9YWB2 115 aa13.32□□□□□ -0.28
PRKCB-202ENST00000321728 A0A0J9YXV3 536 aa13.32□□□□□ -0.28
PRKCB-202ENST00000321728 ADARB2-AS1A8MUL3 147 aa13.32□□□□□ -0.28
PRKCB-202ENST00000321728 LGALS9O00182 355 aa13.32□□□□□ -0.28
PRKCB-202ENST00000321728 IGHV1-69P01742 117 aa13.32□□□□□ -0.28
PRKCB-202ENST00000321728 MOB4Q9Y3A3 225 aa13.32□□□□□ -0.28
PRKCB-202ENST00000321728 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.32□□□□□ -0.282e-9■□□□□ 11.3
PRKCB-202ENST00000321728 GAGE12JA6NER3 117 aa13.32□□□□□ -0.28
PRKCB-202ENST00000321728 KLLNB2CW77 178 aa13.32□□□□□ -0.28
PRKCB-202ENST00000321728 GAGE7O76087 117 aa13.32□□□□□ -0.28
PRKCB-202ENST00000321728 PRSS2P07478 247 aa13.32□□□□□ -0.28
PRKCB-202ENST00000321728 GAGE12FP0CL80 117 aa13.32□□□□□ -0.28
PRKCB-202ENST00000321728 GAGE12GP0CL81 117 aa13.32□□□□□ -0.28
PRKCB-202ENST00000321728 GAGE12IP0CL82 117 aa13.32□□□□□ -0.28
PRKCB-202ENST00000321728 GAGE4Q13068 117 aa13.32□□□□□ -0.28
PRKCB-202ENST00000321728 UBTD1Q9HAC8 227 aa13.32□□□□□ -0.28
PRKCB-202ENST00000321728 TRBV6-5A0A0K0K1A5 114 aa13.31□□□□□ -0.28
PRKCB-202ENST00000321728 CCDC179H3BU77 68 aa13.31□□□□□ -0.28
PRKCB-202ENST00000321728 TRIAP1O43715 76 aa13.31□□□□□ -0.28
PRKCB-202ENST00000321728 A0A0J9YXY3 114 aa13.3□□□□□ -0.28
PRKCB-202ENST00000321728 TRBV10-2A0A0K0K1G8 114 aa13.3□□□□□ -0.28
PRKCB-202ENST00000321728 C15orf53Q8NAA6 179 aa13.3□□□□□ -0.28
PRKCB-202ENST00000321728 H3BMM0 161 aa13.3□□□□□ -0.28
PRKCB-202ENST00000321728 M0R2P5 195 aa13.3□□□□□ -0.28
PRKCB-202ENST00000321728 UBE2WQ96B02 151 aa13.3□□□□□ -0.28
PRKCB-202ENST00000321728 SPXQ9BT56 116 aa13.3□□□□□ -0.28
PRKCB-202ENST00000321728 CUBNO60494 3623 aa13.3□□□□□ -0.28
PRKCB-202ENST00000321728 M0QY20 66 aa13.29□□□□□ -0.28
PRKCB-202ENST00000321728 NSUN5P1Q3KNT7 163 aa13.29□□□□□ -0.28
PRKCB-202ENST00000321728 C19orf54Q5BKX5 351 aa13.29□□□□□ -0.28
PRKCB-202ENST00000321728 ODF3Q96PU9 254 aa13.29□□□□□ -0.28
PRKCB-202ENST00000321728 ABCA2Q9BZC7 2435 aa13.29□□□□□ -0.28
PRKCB-202ENST00000321728 CSMD2Q7Z408 3487 aa13.29□□□□□ -0.28
PRKCB-202ENST00000321728 RHOHQ15669 191 aa13.29□□□□□ -0.28
PRKCB-202ENST00000321728 C2orf82Q6UX34 121 aa13.28□□□□□ -0.28
PRKCB-202ENST00000321728 MDFICQ9P1T7 246 aa13.28□□□□□ -0.28
PRKCB-202ENST00000321728 TRBV30A0A0K0K1B3 111 aa13.28□□□□□ -0.28
PRKCB-202ENST00000321728 PF4V1P10720 104 aa13.28□□□□□ -0.28
PRKCB-202ENST00000321728 RPL13AP40429 203 aaKnown RBP13.28□□□□□ -0.28
PRKCB-202ENST00000321728 BRD3OSQ6XYD6 125 aa13.28□□□□□ -0.28
PRKCB-202ENST00000321728 C20orf203Q8NBC4 194 aa13.28□□□□□ -0.28
PRKCB-202ENST00000321728 IGKV3-20P01619 116 aa13.27□□□□□ -0.28
PRKCB-202ENST00000321728 BPESC1Q9GZL8 116 aa13.27□□□□□ -0.29
PRKCB-202ENST00000321728 TRAV12-2A0A075B6T6 113 aa13.26□□□□□ -0.29
PRKCB-202ENST00000321728 IGHV3-30-3P0DP02 117 aa13.26□□□□□ -0.29
PRKCB-202ENST00000321728 CSPG4Q6UVK1 2322 aa13.26□□□□□ -0.29
PRKCB-202ENST00000321728 IGLV4-3A0A075B6K6 122 aa13.26□□□□□ -0.29
PRKCB-202ENST00000321728 A0A0J9YX75 114 aa13.26□□□□□ -0.29
PRKCB-202ENST00000321728 EDN2P20800 178 aa13.26□□□□□ -0.29
PRKCB-202ENST00000321728 TIMM21Q9BVV7 248 aa13.26□□□□□ -0.29
PRKCB-202ENST00000321728 PRRC2AP48634 2157 aaKnown RBP13.26□□□□□ -0.29
PRKCB-202ENST00000321728 IGHV3-16A0A0C4DH30 117 aa13.26□□□□□ -0.29
PRKCB-202ENST00000321728 ID1P41134 155 aa13.26□□□□□ -0.29
PRKCB-202ENST00000321728 I3L3M4 83 aa13.25□□□□□ -0.29
PRKCB-202ENST00000321728 NPC2P61916 151 aa13.25□□□□□ -0.29
PRKCB-202ENST00000321728 Q6Q795 121 aa13.25□□□□□ -0.29
PRKCB-202ENST00000321728 DAZ1Q9NQZ3 744 aaKnown RBP13.25□□□□□ -0.29
PRKCB-202ENST00000321728 ICOSQ9Y6W8 199 aa13.25□□□□□ -0.29
PRKCB-202ENST00000321728 SORL1Q92673 2214 aa13.25□□□□□ -0.29
PRKCB-202ENST00000321728 LY6EQ16553 131 aa13.25□□□□□ -0.29
PRKCB-202ENST00000321728 USMG5Q96IX5 58 aa13.25□□□□□ -0.29
PRKCB-202ENST00000321728 DOPEY2Q9Y3R5 2298 aa13.24□□□□□ -0.29
PRKCB-202ENST00000321728 TRAV8-3A0A0A6YYJ7 113 aa13.24□□□□□ -0.29
PRKCB-202ENST00000321728 C9orf85Q96MD7 179 aa13.24□□□□□ -0.29
PRKCB-202ENST00000321728 H7C423 109 aa13.24□□□□□ -0.29
PRKCB-202ENST00000321728 UTP20O75691 2785 aaKnown RBP13.23□□□□□ -0.29
PRKCB-202ENST00000321728 COX6CP09669 75 aa13.23□□□□□ -0.29
PRKCB-202ENST00000321728 LMO4P61968 165 aa13.23□□□□□ -0.29
PRKCB-202ENST00000321728 ITPR1Q14643 2758 aa13.23□□□□□ -0.29
PRKCB-202ENST00000321728 CD28P10747 220 aa13.23□□□□□ -0.29
PRKCB-202ENST00000321728 ADAMTSL4-AS1Q5T5F5 129 aa13.22□□□□□ -0.29
PRKCB-202ENST00000321728 Q6ZSV7 163 aa13.22□□□□□ -0.29
PRKCB-202ENST00000321728 CLEC2BQ92478 149 aa13.22□□□□□ -0.29
PRKCB-202ENST00000321728 LITAFQ99732 161 aa13.22□□□□□ -0.29
PRKCB-202ENST00000321728 RNASE13Q5GAN3 156 aaKnown RBP13.21□□□□□ -0.29
PRKCB-202ENST00000321728 LINC01600Q96MT4 127 aa13.21□□□□□ -0.29
PRKCB-202ENST00000321728 DCANP1Q8TF63 244 aa13.21□□□□□ -0.3
PRKCB-202ENST00000321728 NDUFA12Q9UI09 145 aa13.21□□□□□ -0.3
PRKCB-202ENST00000321728 CEMP1Q6PRD7 247 aaPredicted RBP13.2□□□□□ -0.3
PRKCB-202ENST00000321728 DUX3Q96PT4 197 aa13.2□□□□□ -0.3
PRKCB-202ENST00000321728 NBL1P41271 181 aa13.19□□□□□ -0.3
PRKCB-202ENST00000321728 IGHV1OR15-1A0A075B7D0 117 aa13.18□□□□□ -0.3
PRKCB-202ENST00000321728 A8MZ25 164 aa13.18□□□□□ -0.3
PRKCB-202ENST00000321728 H3BT86 120 aa13.18□□□□□ -0.3
PRKCB-202ENST00000321728 LY6DQ14210 128 aa13.18□□□□□ -0.3
PRKCB-202ENST00000321728 SMIM20Q8N5G0 67 aa13.18□□□□□ -0.3
PRKCB-202ENST00000321728 CREBBPQ92793 2442 aa13.18□□□□□ -0.3
PRKCB-202ENST00000321728 IGHV3-73A0A0B4J1V6 119 aa13.18□□□□□ -0.3
PRKCB-202ENST00000321728 SPINK13Q1W4C9 94 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms