RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 KLK9Q2XQG4 91 aa11.65□□□□□ -0.55
SHROOM1-201ENST00000319854 DEFB136Q30KP8 78 aa11.65□□□□□ -0.55
SHROOM1-201ENST00000319854 KLK9Q9UKQ9 250 aa11.65□□□□□ -0.55
SHROOM1-201ENST00000319854 PHLDA3Q9Y5J5 127 aa11.65□□□□□ -0.55
SHROOM1-201ENST00000319854 C2CD3Q4AC94 2353 aa11.64□□□□□ -0.55
SHROOM1-201ENST00000319854 KHDC1LQ5JSQ8 128 aa11.64□□□□□ -0.55
SHROOM1-201ENST00000319854 DUX3Q96PT4 197 aa11.64□□□□□ -0.55
SHROOM1-201ENST00000319854 TRAV12-2A0A075B6T6 113 aa11.64□□□□□ -0.55
SHROOM1-201ENST00000319854 IGLV1-40P01703 118 aa11.64□□□□□ -0.55
SHROOM1-201ENST00000319854 CRIP2P52943 208 aaPredicted RBP11.64□□□□□ -0.55
SHROOM1-201ENST00000319854 CFC1BP0CG36 223 aa11.63□□□□□ -0.55
SHROOM1-201ENST00000319854 CFC1P0CG37 223 aa11.63□□□□□ -0.55
SHROOM1-201ENST00000319854 TRAV12-3A0A0B4J271 114 aa11.63□□□□□ -0.55
SHROOM1-201ENST00000319854 HTN1P15515 57 aa11.63□□□□□ -0.55
SHROOM1-201ENST00000319854 ZFAND6Q6FIF0 208 aa11.63□□□□□ -0.55
SHROOM1-201ENST00000319854 SBSPONQ8IVN8 264 aa11.63□□□□□ -0.55
SHROOM1-201ENST00000319854 A8MWV9 139 aa11.62□□□□□ -0.55
SHROOM1-201ENST00000319854 SOCS3O14543 225 aa11.62□□□□□ -0.55
SHROOM1-201ENST00000319854 CRYGDP07320 174 aa11.62□□□□□ -0.55
SHROOM1-201ENST00000319854 GAGE5Q13069 117 aa11.62□□□□□ -0.55
SHROOM1-201ENST00000319854 GAGE6Q13070 117 aa11.62□□□□□ -0.55
SHROOM1-201ENST00000319854 C2orf66Q6UXQ4 117 aa11.62□□□□□ -0.55
SHROOM1-201ENST00000319854 ZNF843Q8N446 348 aa11.62□□□□□ -0.55
SHROOM1-201ENST00000319854 LINC00477Q96M19 166 aa11.62□□□□□ -0.55
SHROOM1-201ENST00000319854 TRBV7-9A0A0J9YWB2 115 aa11.61□□□□□ -0.55
SHROOM1-201ENST00000319854 A0A0J9YY99 117 aa11.61□□□□□ -0.55
SHROOM1-201ENST00000319854 CITED1Q99966 193 aa11.61□□□□□ -0.55
SHROOM1-201ENST00000319854 JPT2Q9H910 190 aa11.61□□□□□ -0.55
SHROOM1-201ENST00000319854 TRAV21A0A0B4J279 112 aa11.61□□□□□ -0.55
SHROOM1-201ENST00000319854 CRLF1O75462 422 aa11.61□□□□□ -0.55
SHROOM1-201ENST00000319854 SUMO2P61956 95 aaKnown RBP11.61□□□□□ -0.55
SHROOM1-201ENST00000319854 C18orf65Q6ZTR6 163 aa11.61□□□□□ -0.55
SHROOM1-201ENST00000319854 SMIM20Q8N5G0 67 aa11.61□□□□□ -0.55
SHROOM1-201ENST00000319854 TEX29Q8N6K0 151 aa11.61□□□□□ -0.55
SHROOM1-201ENST00000319854 OVOL1O14753 267 aa11.61□□□□□ -0.55
SHROOM1-201ENST00000319854 MRPL53Q96EL3 112 aaKnown RBP11.61□□□□□ -0.55
SHROOM1-201ENST00000319854 HECTD1Q9ULT8 2610 aa11.6□□□□□ -0.55
SHROOM1-201ENST00000319854 TRBV20-1A0A075B6N2 111 aa11.6□□□□□ -0.55
SHROOM1-201ENST00000319854 C11orf86A6NJI1 115 aa11.6□□□□□ -0.55
SHROOM1-201ENST00000319854 PSMB8P28062 276 aa11.6□□□□□ -0.55
SHROOM1-201ENST00000319854 ASIPP42127 132 aa11.6□□□□□ -0.55
SHROOM1-201ENST00000319854 TSPEAR-AS2P59090 65 aa11.6□□□□□ -0.55
SHROOM1-201ENST00000319854 TRPT1Q86TN4 253 aaKnown RBP11.6□□□□□ -0.55
SHROOM1-201ENST00000319854 C11orf44Q8N8P7 122 aa11.6□□□□□ -0.55
SHROOM1-201ENST00000319854 MUC4Q99102 2169 aa11.6□□□□□ -0.55
SHROOM1-201ENST00000319854 ORMDL2Q53FV1 153 aa11.6□□□□□ -0.55
SHROOM1-201ENST00000319854 DUSP14O95147 198 aaKnown RBP11.59□□□□□ -0.55
SHROOM1-201ENST00000319854 IGHV4-4A0A075B6R2 117 aa11.59□□□□□ -0.55
SHROOM1-201ENST00000319854 A0A087WWL8 130 aa11.59□□□□□ -0.55
SHROOM1-201ENST00000319854 TRAV4A0A0B4J268 109 aa11.59□□□□□ -0.55
SHROOM1-201ENST00000319854 SCGB1C2P0DMR2 95 aa11.59□□□□□ -0.55
SHROOM1-201ENST00000319854 EIF4EBP3O60516 100 aaPredicted RBP11.59□□□□□ -0.55
SHROOM1-201ENST00000319854 FAM74A4Q5TZK3 123 aa11.59□□□□□ -0.55
SHROOM1-201ENST00000319854 RAX2Q96IS3 184 aa11.59□□□□□ -0.55
SHROOM1-201ENST00000319854 Q96MF0 132 aa11.59□□□□□ -0.55
SHROOM1-201ENST00000319854 H3BUA1 57 aa11.58□□□□□ -0.56
SHROOM1-201ENST00000319854 TSHBP01222 138 aa11.58□□□□□ -0.56
SHROOM1-201ENST00000319854 IGHV3-30P01768 117 aa11.58□□□□□ -0.56
SHROOM1-201ENST00000319854 IGHV3-30-5P0DP03 117 aa11.58□□□□□ -0.56
SHROOM1-201ENST00000319854 CFHR3Q02985 330 aa11.58□□□□□ -0.56
SHROOM1-201ENST00000319854 NACAE9PAV3 2078 aa11.58□□□□□ -0.56
SHROOM1-201ENST00000319854 IGLV4-69A0A075B6H9 119 aa11.58□□□□□ -0.56
SHROOM1-201ENST00000319854 IGHV4OR15-8A0A075B7B6 117 aa11.58□□□□□ -0.56
SHROOM1-201ENST00000319854 A0A087WW49 117 aa11.58□□□□□ -0.56
SHROOM1-201ENST00000319854 CCDC179H3BU77 68 aa11.58□□□□□ -0.56
SHROOM1-201ENST00000319854 DSCR9P59020 149 aa11.58□□□□□ -0.56
SHROOM1-201ENST00000319854 F5H697 171 aa11.57□□□□□ -0.56
SHROOM1-201ENST00000319854 C10orf126Q8N4M7 172 aa11.57□□□□□ -0.56
SHROOM1-201ENST00000319854 FASNP49327 2511 aaKnown RBP11.57□□□□□ -0.56
SHROOM1-201ENST00000319854 C9JAW5 83 aa11.57□□□□□ -0.56
SHROOM1-201ENST00000319854 BRI3O95415 125 aa11.57□□□□□ -0.56
SHROOM1-201ENST00000319854 SPINK13Q1W4C9 94 aa11.57□□□□□ -0.56
SHROOM1-201ENST00000319854 FAM159AQ6UWV7 190 aa11.57□□□□□ -0.56
SHROOM1-201ENST00000319854 A0A096LNT2 108 aa11.56□□□□□ -0.56
SHROOM1-201ENST00000319854 SLC25A20O43772 301 aa11.56□□□□□ -0.56
SHROOM1-201ENST00000319854 IGHV4-31P0DP07 118 aa11.56□□□□□ -0.56
SHROOM1-201ENST00000319854 RHODO00212 210 aa11.56□□□□□ -0.56
SHROOM1-201ENST00000319854 ELANEP08246 267 aa11.56□□□□□ -0.56
SHROOM1-201ENST00000319854 DCANP1Q8TF63 244 aa11.56□□□□□ -0.56
SHROOM1-201ENST00000319854 VPREB3Q9UKI3 123 aa11.56□□□□□ -0.56
SHROOM1-201ENST00000319854 H7C2G1 150 aa11.55□□□□□ -0.56
SHROOM1-201ENST00000319854 PRM2P04554 102 aa11.55□□□□□ -0.56
SHROOM1-201ENST00000319854 HOXD3P31249 432 aaPredicted RBP11.55□□□□□ -0.56
SHROOM1-201ENST00000319854 ID1P41134 155 aa11.55□□□□□ -0.56
SHROOM1-201ENST00000319854 SLURP1P55000 103 aa11.55□□□□□ -0.56
SHROOM1-201ENST00000319854 RNASE3P12724 160 aaKnown RBP11.55□□□□□ -0.56
SHROOM1-201ENST00000319854 NDUFV3P56181 108 aaKnown RBP11.55□□□□□ -0.56
SHROOM1-201ENST00000319854 PRO1854Q9UHT4 67 aa11.55□□□□□ -0.56
SHROOM1-201ENST00000319854 TMEM262E9PQX1 116 aa11.54□□□□□ -0.56
SHROOM1-201ENST00000319854 RPL39P62891 51 aaKnown RBP11.54□□□□□ -0.56
SHROOM1-201ENST00000319854 LYRM7Q5U5X0 104 aa11.54□□□□□ -0.56
SHROOM1-201ENST00000319854 VCX2Q9H322 139 aa11.54□□□□□ -0.56
SHROOM1-201ENST00000319854 CR1P17927 2039 aa11.53□□□□□ -0.56
SHROOM1-201ENST00000319854 SLC25A29Q8N8R3 303 aa11.53□□□□□ -0.56
SHROOM1-201ENST00000319854 GAGE2BQ13066 116 aa11.53□□□□□ -0.56
SHROOM1-201ENST00000319854 GAGE2EQ4V326 116 aa11.53□□□□□ -0.56
SHROOM1-201ENST00000319854 AMELXQ99217 191 aa11.53□□□□□ -0.56
SHROOM1-201ENST00000319854 FAM110AQ9BQ89 295 aa11.53□□□□□ -0.56
SHROOM1-201ENST00000319854 GAGE2DQ9UEU5 116 aa11.53□□□□□ -0.56
SHROOM1-201ENST00000319854 NTN5Q8WTR8 489 aaPredicted RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms