RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 A0A1W2PPQ1 181 aa8.09□□□□□ -1.11
SCFD1-201ENST00000311943 F2Z2F3 143 aa8.09□□□□□ -1.11
SCFD1-201ENST00000311943 CACNG7P62955 275 aa8.09□□□□□ -1.11
SCFD1-201ENST00000311943 RPL36AP83881 106 aaKnown RBP8.09□□□□□ -1.11
SCFD1-201ENST00000311943 SOHLH1Q5JUK2 328 aa8.09□□□□□ -1.11
SCFD1-201ENST00000311943 GATD1Q8NB37 220 aa8.09□□□□□ -1.11
SCFD1-201ENST00000311943 RPL36ALQ969Q0 106 aaKnown RBP8.09□□□□□ -1.11
SCFD1-201ENST00000311943 CNFNQ9BYD5 112 aa8.09□□□□□ -1.11
SCFD1-201ENST00000311943 OSTCQ9NRP0 149 aa8.09□□□□□ -1.11
SCFD1-201ENST00000311943 NAT8Q9UHE5 227 aa8.09□□□□□ -1.11
SCFD1-201ENST00000311943 ADCYAP1P18509 176 aa8.08□□□□□ -1.12
SCFD1-201ENST00000311943 LINC00336Q6ZUF6 198 aa8.08□□□□□ -1.12
SCFD1-201ENST00000311943 NUP35Q8NFH5 326 aa8.08□□□□□ -1.12
SCFD1-201ENST00000311943 TSKUQ8WUA8 353 aa8.08□□□□□ -1.12
SCFD1-201ENST00000311943 A8MWL6 223 aa8.08□□□□□ -1.12
SCFD1-201ENST00000311943 TTC32Q5I0X7 151 aa8.08□□□□□ -1.12
SCFD1-201ENST00000311943 CLLU1Q5K131 121 aa8.08□□□□□ -1.12
SCFD1-201ENST00000311943 Q8N976 141 aa8.08□□□□□ -1.12
SCFD1-201ENST00000311943 KRTAP17-1Q9BYP8 105 aa8.08□□□□□ -1.12
SCFD1-201ENST00000311943 DPH3P1Q9H4G8 78 aa8.08□□□□□ -1.12
SCFD1-201ENST00000311943 TRAV8-6A0A0B4J262 113 aa8.07□□□□□ -1.12
SCFD1-201ENST00000311943 TRBV10-1A0A0K0K1A3 114 aa8.07□□□□□ -1.12
SCFD1-201ENST00000311943 SMKR1H3BMG3 65 aa8.07□□□□□ -1.12
SCFD1-201ENST00000311943 TIRAPP58753 221 aa8.07□□□□□ -1.12
SCFD1-201ENST00000311943 LINC01556Q5JQF7 62 aa8.07□□□□□ -1.12
SCFD1-201ENST00000311943 OR10G8Q8NGN5 311 aa8.07□□□□□ -1.12
SCFD1-201ENST00000311943 RPS10P46783 165 aaKnown RBP8.07□□□□□ -1.12
SCFD1-201ENST00000311943 RAB14P61106 215 aa8.07□□□□□ -1.12
SCFD1-201ENST00000311943 WFDC2Q14508 124 aa8.07□□□□□ -1.12
SCFD1-201ENST00000311943 SH2D6Q7Z4S9 175 aa8.07□□□□□ -1.12
SCFD1-201ENST00000311943 NIT1Q86X76 327 aa8.07□□□□□ -1.12
SCFD1-201ENST00000311943 AMN1Q8IY45 258 aa8.07□□□□□ -1.12
SCFD1-201ENST00000311943 MAPKAPK5-AS1Q8N8E1 139 aa8.07□□□□□ -1.12
SCFD1-201ENST00000311943 RNF185Q96GF1 192 aa8.07□□□□□ -1.12
SCFD1-201ENST00000311943 TRBV6-8A0A0A6YYG3 113 aa8.06□□□□□ -1.12
SCFD1-201ENST00000311943 MPV17L2Q567V2 206 aa8.06□□□□□ -1.12
SCFD1-201ENST00000311943 NDUFS6O75380 124 aaKnown RBP8.05□□□□□ -1.12
SCFD1-201ENST00000311943 NCR2O95944 276 aa8.05□□□□□ -1.12
SCFD1-201ENST00000311943 TRGC1P0CF51 173 aa8.05□□□□□ -1.12
SCFD1-201ENST00000311943 FAM74A3Q4VXF1 159 aa8.05□□□□□ -1.12
SCFD1-201ENST00000311943 SPATA12Q7Z6I5 190 aa8.05□□□□□ -1.12
SCFD1-201ENST00000311943 KLK12Q9UKR0 248 aa8.05□□□□□ -1.12
SCFD1-201ENST00000311943 IBA57-AS1B1ANH7 110 aa8.05□□□□□ -1.12
SCFD1-201ENST00000311943 LECT2O14960 151 aa8.05□□□□□ -1.12
SCFD1-201ENST00000311943 CT83Q5H943 113 aa8.05□□□□□ -1.12
SCFD1-201ENST00000311943 RASL11AQ6T310 242 aa8.05□□□□□ -1.12
SCFD1-201ENST00000311943 CLPSL2Q6UWE3 100 aa8.05□□□□□ -1.12
SCFD1-201ENST00000311943 TMEM262E9PQX1 116 aa8.04□□□□□ -1.12
SCFD1-201ENST00000311943 CAMPP49913 170 aa8.04□□□□□ -1.12
SCFD1-201ENST00000311943 GAGE6Q13070 117 aa8.04□□□□□ -1.12
SCFD1-201ENST00000311943 C15orf54Q8N8G6 183 aa8.04□□□□□ -1.12
SCFD1-201ENST00000311943 HERC2O95714 4834 aa8.03□□□□□ -1.12
SCFD1-201ENST00000311943 A0A1B0GUT8 65 aa8.03□□□□□ -1.12
SCFD1-201ENST00000311943 SMIM27A0A1W2PRY6 76 aa8.03□□□□□ -1.12
SCFD1-201ENST00000311943 MRPL54Q6P161 138 aaKnown RBP8.03□□□□□ -1.12
SCFD1-201ENST00000311943 WDR73Q6P4I2 378 aa8.03□□□□□ -1.12
SCFD1-201ENST00000311943 NIT2Q9NQR4 276 aa8.03□□□□□ -1.12
SCFD1-201ENST00000311943 RAB4AP20338 218 aa8.03□□□□□ -1.12
SCFD1-201ENST00000311943 CHCHD5Q9BSY4 110 aa8.03□□□□□ -1.12
SCFD1-201ENST00000311943 GFRA4Q9GZZ7 299 aa8.03□□□□□ -1.12
SCFD1-201ENST00000311943 APOBP04114 4563 aaKnown RBP8.02□□□□□ -1.13
SCFD1-201ENST00000311943 SMDT1Q9H4I9 107 aa8.02□□□□□ -1.13
SCFD1-201ENST00000311943 TRAV9-2A0A087WT02 112 aa8.02□□□□□ -1.13
SCFD1-201ENST00000311943 A0A087WTM6 91 aa8.02□□□□□ -1.13
SCFD1-201ENST00000311943 ATRAIDQ6UW56 229 aa8.02□□□□□ -1.13
SCFD1-201ENST00000311943 ENHOQ6UWT2 76 aa8.02□□□□□ -1.13
SCFD1-201ENST00000311943 UBE2WQ96B02 151 aa8.02□□□□□ -1.13
SCFD1-201ENST00000311943 RYR1P21817 5038 aa8.01□□□□□ -1.13
SCFD1-201ENST00000311943 IGLV4-60A0A075B6I1 120 aa8.01□□□□□ -1.13
SCFD1-201ENST00000311943 A0A087WWC5 75 aa8.01□□□□□ -1.13
SCFD1-201ENST00000311943 LRCOL1A6NCL2 159 aa8.01□□□□□ -1.13
SCFD1-201ENST00000311943 COMMD7Q86VX2 200 aa8.01□□□□□ -1.13
SCFD1-201ENST00000311943 NAT8BQ9UHF3 227 aa8.01□□□□□ -1.13
SCFD1-201ENST00000311943 TMEM191AQ9H0A3 160 aa8□□□□□ -1.13
SCFD1-201ENST00000311943 HSPG2P98160 4391 aa8□□□□□ -1.13
SCFD1-201ENST00000311943 A0A087WX48 190 aa8□□□□□ -1.13
SCFD1-201ENST00000311943 C16orf90A8MZG2 172 aa8□□□□□ -1.13
SCFD1-201ENST00000311943 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.99□□□□□ -1.13
SCFD1-201ENST00000311943 IGKV2-29A2NJV5 120 aaPredicted RBP7.99□□□□□ -1.13
SCFD1-201ENST00000311943 TMEM218A2RU14 115 aa7.99□□□□□ -1.13
SCFD1-201ENST00000311943 SDHAF1A6NFY7 115 aa7.99□□□□□ -1.13
SCFD1-201ENST00000311943 H7C1H1 209 aa7.99□□□□□ -1.13
SCFD1-201ENST00000311943 ANGP03950 147 aaKnown RBP7.99□□□□□ -1.13
SCFD1-201ENST00000311943 RBX1P62877 108 aa7.99□□□□□ -1.13
SCFD1-201ENST00000311943 HAMPP81172 84 aa7.99□□□□□ -1.13
SCFD1-201ENST00000311943 BAALCQ8WXS3 180 aa7.99□□□□□ -1.13
SCFD1-201ENST00000311943 BORCS7Q96B45 105 aa7.99□□□□□ -1.13
SCFD1-201ENST00000311943 URGCP-MRPS24S4R325 110 aa7.99□□□□□ -1.13
SCFD1-201ENST00000311943 FAM231BA6NCW3 169 aa7.98□□□□□ -1.13
SCFD1-201ENST00000311943 LINC01620Q4KN68 170 aa7.98□□□□□ -1.13
SCFD1-201ENST00000311943 MRPL51Q4U2R6 128 aaKnown RBP7.98□□□□□ -1.13
SCFD1-201ENST00000311943 C10orf126Q8N4M7 172 aa7.98□□□□□ -1.13
SCFD1-201ENST00000311943 IGLV10-54A0A075B6I4 117 aa7.98□□□□□ -1.13
SCFD1-201ENST00000311943 A0A1B0GXF2 115 aa7.98□□□□□ -1.13
SCFD1-201ENST00000311943 F8W036 122 aa7.98□□□□□ -1.13
SCFD1-201ENST00000311943 PSCAO43653 123 aa7.98□□□□□ -1.13
SCFD1-201ENST00000311943 IQCJQ1A5X6 159 aa7.98□□□□□ -1.13
SCFD1-201ENST00000311943 LINC00269Q8N2A0 174 aa7.98□□□□□ -1.13
SCFD1-201ENST00000311943 NRACQ8N912 160 aa7.98□□□□□ -1.13
SCFD1-201ENST00000311943 C20orf203Q8NBC4 194 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms