RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 TNRC6AQ8NDV7 1962 aaKnown RBP6.31□□□□□ -1.4
VPS41-202ENST00000310301 CADP27708 2225 aa6.31□□□□□ -1.4
VPS41-202ENST00000310301 CEP295Q9C0D2 2601 aa6.31□□□□□ -1.4
VPS41-202ENST00000310301 H3BQ85 93 aa6.31□□□□□ -1.4
VPS41-202ENST00000310301 BUB3O43684 328 aa6.31□□□□□ -1.4
VPS41-202ENST00000310301 UPK3BQ9BT76 320 aa6.31□□□□□ -1.4
VPS41-202ENST00000310301 PATE2Q6UY27 113 aa6.3□□□□□ -1.4
VPS41-202ENST00000310301 C20orf197Q8N268 126 aa6.3□□□□□ -1.4
VPS41-202ENST00000310301 TLN1Q9Y490 2541 aaKnown RBP6.3□□□□□ -1.4
VPS41-202ENST00000310301 TMEM89A2RUT3 159 aa6.3□□□□□ -1.4
VPS41-202ENST00000310301 C2orf70A6NJV1 201 aa6.3□□□□□ -1.4
VPS41-202ENST00000310301 CGB3P0DN86 165 aa6.3□□□□□ -1.4
VPS41-202ENST00000310301 SDIM1Q6ZPB5 146 aa6.3□□□□□ -1.4
VPS41-202ENST00000310301 IGKV1OR2-108A0A075B7D4 117 aa6.3□□□□□ -1.4
VPS41-202ENST00000310301 A0A0J9YY99 117 aa6.3□□□□□ -1.4
VPS41-202ENST00000310301 TEX49A0A1B0GTD5 131 aa6.3□□□□□ -1.4
VPS41-202ENST00000310301 RPL18AQ02543 176 aaKnown RBP6.3□□□□□ -1.4
VPS41-202ENST00000310301 CTSZQ9UBR2 303 aa6.3□□□□□ -1.4
VPS41-202ENST00000310301 FAM240AA0A1B0GVK7 77 aa6.29□□□□□ -1.4
VPS41-202ENST00000310301 ARFGEF3Q5TH69 2177 aa6.29□□□□□ -1.4
VPS41-202ENST00000310301 NDUFB1O75438 58 aa6.29□□□□□ -1.4
VPS41-202ENST00000310301 HILS1P60008 231 aa6.29□□□□□ -1.4
VPS41-202ENST00000310301 C11orf71Q6IPW1 123 aa6.29□□□□□ -1.4
VPS41-202ENST00000310301 CSPG4Q6UVK1 2322 aa6.29□□□□□ -1.4
VPS41-202ENST00000310301 IGKV2D-24A0A075B6R9 120 aa6.29□□□□□ -1.4
VPS41-202ENST00000310301 NDUFC2-KCTD14E9PQ53 114 aa6.29□□□□□ -1.4
VPS41-202ENST00000310301 LHBP01229 141 aa6.29□□□□□ -1.4
VPS41-202ENST00000310301 HIGD2BQ4VC39 106 aa6.29□□□□□ -1.4
VPS41-202ENST00000310301 RMI2Q96E14 147 aa6.29□□□□□ -1.4
VPS41-202ENST00000310301 ANKRD11Q6UB99 2663 aaPredicted RBP6.29□□□□□ -1.4
VPS41-202ENST00000310301 TMEM256-PLSCR3K7ERE1 68 aa6.29□□□□□ -1.4
VPS41-202ENST00000310301 WI2-2373I1.2A0A1W2PRP0 233 aa6.29□□□□□ -1.4
VPS41-202ENST00000310301 RNF152Q8N8N0 203 aa6.29□□□□□ -1.4
VPS41-202ENST00000310301 ZNF295-AS1Q8N0V1 137 aa6.28□□□□□ -1.4
VPS41-202ENST00000310301 IGKV2D-26A0A0A0MRZ7 120 aa6.28□□□□□ -1.4
VPS41-202ENST00000310301 FAM167A-AS1Q96KT0 104 aa6.28□□□□□ -1.4
VPS41-202ENST00000310301 IGLV10-54A0A075B6I4 117 aa6.28□□□□□ -1.4
VPS41-202ENST00000310301 CGB7P0DN87 165 aa6.28□□□□□ -1.4
VPS41-202ENST00000310301 TP73-AS1Q9UF72 201 aa6.28□□□□□ -1.4
VPS41-202ENST00000310301 K7EQD1 137 aa6.28□□□□□ -1.4
VPS41-202ENST00000310301 C16orf54Q6UWD8 224 aa6.28□□□□□ -1.4
VPS41-202ENST00000310301 NFE4Q86UQ8 179 aa6.28□□□□□ -1.4
VPS41-202ENST00000310301 TIMM17AQ99595 171 aa6.28□□□□□ -1.4
VPS41-202ENST00000310301 SMAD5-AS1Q9Y6J3 95 aa6.28□□□□□ -1.4
VPS41-202ENST00000310301 PLXNB3Q9ULL4 1909 aa6.28□□□□□ -1.4
VPS41-202ENST00000310301 MALRD1Q5VYJ5 2156 aa6.28□□□□□ -1.4
VPS41-202ENST00000310301 COX7A2LO14548 114 aa6.27□□□□□ -1.4
VPS41-202ENST00000310301 Q6YL49 198 aa6.27□□□□□ -1.4
VPS41-202ENST00000310301 I3L2K1 104 aa6.27□□□□□ -1.41
VPS41-202ENST00000310301 ZFP36P26651 326 aaKnown RBP6.27□□□□□ -1.41
VPS41-202ENST00000310301 LYPD6Q86Y78 171 aa6.27□□□□□ -1.41
VPS41-202ENST00000310301 CAMK2N2Q96S95 79 aa6.27□□□□□ -1.41
VPS41-202ENST00000310301 FAM110AQ9BQ89 295 aa6.27□□□□□ -1.41
VPS41-202ENST00000310301 EPG5Q9HCE0 2579 aa6.27□□□□□ -1.41
VPS41-202ENST00000310301 ABCA1O95477 2261 aa6.27□□□□□ -1.41
VPS41-202ENST00000310301 SIRPDQ9H106 197 aa6.27□□□□□ -1.41
VPS41-202ENST00000310301 KLK5Q9Y337 293 aaPredicted RBP6.27□□□□□ -1.41
VPS41-202ENST00000310301 IGHV1-58A0A0C4DH39 117 aa6.26□□□□□ -1.41
VPS41-202ENST00000310301 CTRLP40313 264 aa6.26□□□□□ -1.41
VPS41-202ENST00000310301 DAZ2Q13117 558 aaKnown RBP6.26□□□□□ -1.41
VPS41-202ENST00000310301 DAZ4Q86SG3 579 aaKnown RBP6.26□□□□□ -1.41
VPS41-202ENST00000310301 ZNF503Q96F45 646 aa6.26□□□□□ -1.41
VPS41-202ENST00000310301 DAZ3Q9NR90 486 aaKnown RBP6.26□□□□□ -1.41
VPS41-202ENST00000310301 MIR7-3HGQ8N6C7 128 aa6.26□□□□□ -1.41
VPS41-202ENST00000310301 TNRC6BQ9UPQ9 1833 aaKnown RBP6.26□□□□□ -1.41
VPS41-202ENST00000310301 KRTAP10-9P60411 292 aa6.26□□□□□ -1.41
VPS41-202ENST00000310301 PRAC2D3DTV9 90 aa6.26□□□□□ -1.41
VPS41-202ENST00000310301 MLST8Q9BVC4 326 aa6.26□□□□□ -1.41
VPS41-202ENST00000310301 MIAQ16674 131 aa6.26□□□□□ -1.41
VPS41-202ENST00000310301 C9orf47Q6ZRZ4 202 aa6.26□□□□□ -1.41
VPS41-202ENST00000310301 RITA1Q96K30 269 aa6.26□□□□□ -1.41
VPS41-202ENST00000310301 SONP18583 2426 aaKnown RBP6.25□□□□□ -1.41
VPS41-202ENST00000310301 TEX22C9J3V5 150 aa6.25□□□□□ -1.41
VPS41-202ENST00000310301 K7EIM0 57 aa6.25□□□□□ -1.41
VPS41-202ENST00000310301 IGHV3-30-3P0DP02 117 aa6.25□□□□□ -1.41
VPS41-202ENST00000310301 APRG1Q8IVJ8 170 aa6.25□□□□□ -1.41
VPS41-202ENST00000310301 NPBQ8NG41 125 aa6.25□□□□□ -1.41
VPS41-202ENST00000310301 MED13LQ71F56 2210 aa6.25□□□□□ -1.41
VPS41-202ENST00000310301 EML6Q6ZMW3 1958 aa6.25□□□□□ -1.41
VPS41-202ENST00000310301 NDUFA7O95182 113 aa6.25□□□□□ -1.41
VPS41-202ENST00000310301 IGKV1-17P01599 117 aa6.25□□□□□ -1.41
VPS41-202ENST00000310301 C11orf53Q8IXP5 236 aa6.25□□□□□ -1.41
VPS41-202ENST00000310301 DIRC1Q969H9 104 aa6.25□□□□□ -1.41
VPS41-202ENST00000310301 CCDC179H3BU77 68 aa6.24□□□□□ -1.41
VPS41-202ENST00000310301 GYPEP15421 78 aa6.24□□□□□ -1.41
VPS41-202ENST00000310301 KRTAP27-1Q3LI81 207 aa6.24□□□□□ -1.41
VPS41-202ENST00000310301 CLUHP3Q96NS8 147 aa6.24□□□□□ -1.41
VPS41-202ENST00000310301 FGF23Q9GZV9 251 aaPredicted RBP6.24□□□□□ -1.41
VPS41-202ENST00000310301 ZNF462Q96JM2 2506 aa6.24□□□□□ -1.41
VPS41-202ENST00000310301 C19orf71A6NCJ1 209 aa6.24□□□□□ -1.41
VPS41-202ENST00000310301 SEC61GP60059 68 aa6.24□□□□□ -1.41
VPS41-202ENST00000310301 ENHOQ6UWT2 76 aa6.24□□□□□ -1.41
VPS41-202ENST00000310301 AJUBAQ96IF1 538 aa6.24□□□□□ -1.41
VPS41-202ENST00000310301 IGLV2-23P01705 113 aa6.24□□□□□ -1.41
VPS41-202ENST00000310301 COL4A2P08572 1712 aa6.24□□□□□ -1.41
VPS41-202ENST00000310301 PDE6GP18545 87 aa6.24□□□□□ -1.41
VPS41-202ENST00000310301 TIRAPP58753 221 aa6.24□□□□□ -1.41
VPS41-202ENST00000310301 MRPL36Q9P0J6 103 aaKnown RBP6.24□□□□□ -1.41
VPS41-202ENST00000310301 A0A0J9YXY3 114 aa6.23□□□□□ -1.41
VPS41-202ENST00000310301 CXCL5P42830 114 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms