RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 ANAPC16Q96DE5 110 aa6.23□□□□□ -1.41
PDE4D-201ENST00000309641 RNF185Q96GF1 192 aa6.23□□□□□ -1.41
PDE4D-201ENST00000309641 MRPS16Q9Y3D3 137 aaKnown RBP6.23□□□□□ -1.41
PDE4D-201ENST00000309641 TRBV7-3A0A075B6L6 115 aa6.22□□□□□ -1.41
PDE4D-201ENST00000309641 TRBV10-1A0A0K0K1A3 114 aa6.22□□□□□ -1.41
PDE4D-201ENST00000309641 UBE2D3P61077 147 aa6.22□□□□□ -1.41
PDE4D-201ENST00000309641 UBE2D2P62837 147 aa6.22□□□□□ -1.41
PDE4D-201ENST00000309641 RIGQ13278 110 aa6.22□□□□□ -1.41
PDE4D-201ENST00000309641 KRTAP1-5Q9BYS1 174 aa6.22□□□□□ -1.41
PDE4D-201ENST00000309641 Q9H8V8 135 aa6.22□□□□□ -1.41
PDE4D-201ENST00000309641 A0A1B0GXF2 115 aa6.21□□□□□ -1.41
PDE4D-201ENST00000309641 C7orf77A4D0Y5 90 aa6.21□□□□□ -1.41
PDE4D-201ENST00000309641 APOC3P02656 99 aa6.21□□□□□ -1.41
PDE4D-201ENST00000309641 RPL36AP83881 106 aaKnown RBP6.21□□□□□ -1.41
PDE4D-201ENST00000309641 Q8N3U1 123 aa6.21□□□□□ -1.41
PDE4D-201ENST00000309641 CLRN3Q8NCR9 226 aa6.21□□□□□ -1.41
PDE4D-201ENST00000309641 RPL36ALQ969Q0 106 aaKnown RBP6.21□□□□□ -1.41
PDE4D-201ENST00000309641 RPL39LQ96EH5 51 aaKnown RBP6.21□□□□□ -1.41
PDE4D-201ENST00000309641 UPK3BQ9BT76 320 aa6.21□□□□□ -1.41
PDE4D-201ENST00000309641 TMEM191AQ9H0A3 160 aa6.21□□□□□ -1.41
PDE4D-201ENST00000309641 GTSF1LQ9H1H1 148 aa6.21□□□□□ -1.41
PDE4D-201ENST00000309641 PRSS47A8MTI9 375 aa6.21□□□□□ -1.42
PDE4D-201ENST00000309641 SMKR1H3BMG3 65 aa6.21□□□□□ -1.42
PDE4D-201ENST00000309641 RAB4AP20338 218 aa6.21□□□□□ -1.42
PDE4D-201ENST00000309641 RASL11AQ6T310 242 aa6.21□□□□□ -1.42
PDE4D-201ENST00000309641 SMIM15Q7Z3B0 74 aa6.21□□□□□ -1.42
PDE4D-201ENST00000309641 FRAS1Q86XX4 4008 aa6.2□□□□□ -1.42
PDE4D-201ENST00000309641 DNAH6Q9C0G6 4158 aa6.2□□□□□ -1.42
PDE4D-201ENST00000309641 DNAH2Q9P225 4427 aa6.2□□□□□ -1.42
PDE4D-201ENST00000309641 RPS10P46783 165 aaKnown RBP6.2□□□□□ -1.42
PDE4D-201ENST00000309641 SH2D6Q7Z4S9 175 aa6.2□□□□□ -1.42
PDE4D-201ENST00000309641 RPS10P5Q9NQ39 176 aa6.2□□□□□ -1.42
PDE4D-201ENST00000309641 URGCP-MRPS24S4R325 110 aa6.2□□□□□ -1.42
PDE4D-201ENST00000309641 NCR2O95944 276 aa6.2□□□□□ -1.42
PDE4D-201ENST00000309641 HBBP68871 147 aa6.2□□□□□ -1.42
PDE4D-201ENST00000309641 Q6ZR54 194 aa6.2□□□□□ -1.42
PDE4D-201ENST00000309641 NTM-AS1Q6ZSK4 140 aa6.2□□□□□ -1.42
PDE4D-201ENST00000309641 NIT2Q9NQR4 276 aa6.2□□□□□ -1.42
PDE4D-201ENST00000309641 SIVA1O15304 175 aa6.19□□□□□ -1.42
PDE4D-201ENST00000309641 TIRAPP58753 221 aa6.19□□□□□ -1.42
PDE4D-201ENST00000309641 MRPL51Q4U2R6 128 aaKnown RBP6.19□□□□□ -1.42
PDE4D-201ENST00000309641 FAM104BQ5XKR9 115 aa6.19□□□□□ -1.42
PDE4D-201ENST00000309641 ATRAIDQ6UW56 229 aa6.19□□□□□ -1.42
PDE4D-201ENST00000309641 CTDSP1Q9GZU7 261 aa6.19□□□□□ -1.42
PDE4D-201ENST00000309641 TNFRSF18Q9Y5U5 241 aa6.19□□□□□ -1.42
PDE4D-201ENST00000309641 NBDYA0A0U1RRE5 68 aa6.18□□□□□ -1.42
PDE4D-201ENST00000309641 H7C1H1 209 aa6.18□□□□□ -1.42
PDE4D-201ENST00000309641 OR10J3Q5JRS4 329 aa6.18□□□□□ -1.42
PDE4D-201ENST00000309641 LELP1Q5T871 98 aa6.18□□□□□ -1.42
PDE4D-201ENST00000309641 DNAH10Q8IVF4 4471 aa6.18□□□□□ -1.42
PDE4D-201ENST00000309641 RHEBQ15382 184 aa6.18□□□□□ -1.42
PDE4D-201ENST00000309641 A0A087WWC5 75 aa6.17□□□□□ -1.42
PDE4D-201ENST00000309641 A0A1B0GW15 77 aa6.17□□□□□ -1.42
PDE4D-201ENST00000309641 ATP5L2Q7Z4Y8 100 aa6.17□□□□□ -1.42
PDE4D-201ENST00000309641 SVBPQ8N300 66 aa6.17□□□□□ -1.42
PDE4D-201ENST00000309641 NRACQ8N912 160 aa6.17□□□□□ -1.42
PDE4D-201ENST00000309641 BTF3L4Q96K17 158 aa6.17□□□□□ -1.42
PDE4D-201ENST00000309641 DNAJC30Q96LL9 226 aa6.17□□□□□ -1.42
PDE4D-201ENST00000309641 IMMP2LQ96T52 175 aa6.17□□□□□ -1.42
PDE4D-201ENST00000309641 TMEM242Q9NWH2 141 aa6.17□□□□□ -1.42
PDE4D-201ENST00000309641 TRBV6-8A0A0A6YYG3 113 aa6.16□□□□□ -1.42
PDE4D-201ENST00000309641 SDHAF1A6NFY7 115 aa6.16□□□□□ -1.42
PDE4D-201ENST00000309641 DNAH10OSP0CZ25 163 aa6.16□□□□□ -1.42
PDE4D-201ENST00000309641 MRAP2Q96G30 205 aa6.16□□□□□ -1.42
PDE4D-201ENST00000309641 TRAV8-6A0A0B4J262 113 aa6.16□□□□□ -1.42
PDE4D-201ENST00000309641 D6R8Y8 96 aa6.16□□□□□ -1.42
PDE4D-201ENST00000309641 SNAPINO95295 136 aa6.16□□□□□ -1.42
PDE4D-201ENST00000309641 IGHV3-30P01768 117 aa6.16□□□□□ -1.42
PDE4D-201ENST00000309641 IGHV3-33P01772 117 aa6.16□□□□□ -1.42
PDE4D-201ENST00000309641 IGHV3-30-3P0DP02 117 aa6.16□□□□□ -1.42
PDE4D-201ENST00000309641 IGHV3-30-5P0DP03 117 aa6.16□□□□□ -1.42
PDE4D-201ENST00000309641 NDUFA5Q16718 116 aa6.16□□□□□ -1.42
PDE4D-201ENST00000309641 DAZ4Q86SG3 579 aaKnown RBP6.16□□□□□ -1.42
PDE4D-201ENST00000309641 DAZ3Q9NR90 486 aaKnown RBP6.16□□□□□ -1.42
PDE4D-201ENST00000309641 KCNIP4Q6PIL6 250 aa6.15□□□□□ -1.42
PDE4D-201ENST00000309641 NIT1Q86X76 327 aa6.15□□□□□ -1.42
PDE4D-201ENST00000309641 TMEM70Q9BUB7 260 aa6.15□□□□□ -1.42
PDE4D-201ENST00000309641 TGIF2-C20orf24A0A0A6YYL0 155 aa6.15□□□□□ -1.43
PDE4D-201ENST00000309641 TRBV6-5A0A0K0K1A5 114 aa6.15□□□□□ -1.43
PDE4D-201ENST00000309641 RTL8CO15255 209 aa6.15□□□□□ -1.43
PDE4D-201ENST00000309641 NPYP01303 97 aa6.15□□□□□ -1.43
PDE4D-201ENST00000309641 S100A8P05109 93 aa6.15□□□□□ -1.43
PDE4D-201ENST00000309641 CKS2P33552 79 aa6.15□□□□□ -1.43
PDE4D-201ENST00000309641 POLR2KP53803 58 aaKnown RBP6.15□□□□□ -1.43
PDE4D-201ENST00000309641 TMEM136Q6ZRR5 245 aa6.15□□□□□ -1.43
PDE4D-201ENST00000309641 FRZBQ92765 325 aa6.15□□□□□ -1.43
PDE4D-201ENST00000309641 S100PP25815 95 aa6.14□□□□□ -1.43
PDE4D-201ENST00000309641 ELOBQ15370 118 aa6.14□□□□□ -1.43
PDE4D-201ENST00000309641 LINC01556Q5JQF7 62 aa6.14□□□□□ -1.43
PDE4D-201ENST00000309641 ST20Q9HBF5 79 aa6.14□□□□□ -1.43
PDE4D-201ENST00000309641 TNFRSF6BO95407 300 aa6.13□□□□□ -1.43
PDE4D-201ENST00000309641 GAGE6Q13070 117 aa6.13□□□□□ -1.43
PDE4D-201ENST00000309641 IQCJQ1A5X6 159 aa6.13□□□□□ -1.43
PDE4D-201ENST00000309641 KIAA1644Q3SXP7 199 aa6.13□□□□□ -1.43
PDE4D-201ENST00000309641 MPV17L2Q567V2 206 aa6.13□□□□□ -1.43
PDE4D-201ENST00000309641 Q8N976 141 aa6.13□□□□□ -1.43
PDE4D-201ENST00000309641 CHCHD5Q9BSY4 110 aa6.13□□□□□ -1.43
PDE4D-201ENST00000309641 FAT2Q9NYQ8 4349 aa6.13□□□□□ -1.43
PDE4D-201ENST00000309641 TRAV9-1A0A075B6T8 112 aa6.13□□□□□ -1.43
PDE4D-201ENST00000309641 TSHBP01222 138 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms