RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 A0A1B0GXF2 115 aa12.38□□□□□ -0.43
SSSCA1-201ENST00000309328 GAGE12JA6NER3 117 aa12.38□□□□□ -0.43
SSSCA1-201ENST00000309328 GAGE1Q13065 139 aa12.38□□□□□ -0.43
SSSCA1-201ENST00000309328 GAGE4Q13068 117 aa12.38□□□□□ -0.43
SSSCA1-201ENST00000309328 GAGE5Q13069 117 aa12.38□□□□□ -0.43
SSSCA1-201ENST00000309328 ESRGQ1W209 222 aa12.38□□□□□ -0.43
SSSCA1-201ENST00000309328 GAGE13Q4V321 117 aa12.38□□□□□ -0.43
SSSCA1-201ENST00000309328 TMEM97Q5BJF2 176 aa12.38□□□□□ -0.43
SSSCA1-201ENST00000309328 LYPD5Q6UWN5 251 aa12.38□□□□□ -0.43
SSSCA1-201ENST00000309328 DAZ4Q86SG3 579 aaKnown RBP12.38□□□□□ -0.43
SSSCA1-201ENST00000309328 RPS10P5Q9NQ39 176 aa12.38□□□□□ -0.43
SSSCA1-201ENST00000309328 DAZ3Q9NR90 486 aaKnown RBP12.38□□□□□ -0.43
SSSCA1-201ENST00000309328 TNFRSF18Q9Y5U5 241 aa12.38□□□□□ -0.43
SSSCA1-201ENST00000309328 CAMPP49913 170 aa12.37□□□□□ -0.43
SSSCA1-201ENST00000309328 UBE2D3P61077 147 aa12.37□□□□□ -0.43
SSSCA1-201ENST00000309328 UBE2D2P62837 147 aa12.37□□□□□ -0.43
SSSCA1-201ENST00000309328 MRPL54Q6P161 138 aaKnown RBP12.37□□□□□ -0.43
SSSCA1-201ENST00000309328 SLC7A5P1Q8MH63 180 aa12.37□□□□□ -0.43
SSSCA1-201ENST00000309328 GATD1Q8NB37 220 aa12.37□□□□□ -0.43
SSSCA1-201ENST00000309328 NEXN-AS1Q8NBZ9 246 aa12.37□□□□□ -0.43
SSSCA1-201ENST00000309328 ZNRF2Q8NHG8 242 aa12.37□□□□□ -0.43
SSSCA1-201ENST00000309328 NIT2Q9NQR4 276 aa12.37□□□□□ -0.43
SSSCA1-201ENST00000309328 LINC00588Q9Y4M8 146 aa12.37□□□□□ -0.43
SSSCA1-201ENST00000309328 DNAH1Q9P2D7 4330 aa12.37□□□□□ -0.43
SSSCA1-201ENST00000309328 FAM104BQ5XKR9 115 aa12.35□□□□□ -0.43
SSSCA1-201ENST00000309328 TRAV8-6A0A0B4J262 113 aa12.34□□□□□ -0.43
SSSCA1-201ENST00000309328 K7EP13 123 aa12.34□□□□□ -0.43
SSSCA1-201ENST00000309328 RAB4AP20338 218 aa12.34□□□□□ -0.43
SSSCA1-201ENST00000309328 COX19Q49B96 90 aa12.34□□□□□ -0.43
SSSCA1-201ENST00000309328 LELP1Q5T871 98 aa12.34□□□□□ -0.43
SSSCA1-201ENST00000309328 VPS13DQ5THJ4 4388 aa12.34□□□□□ -0.43
SSSCA1-201ENST00000309328 KMT2CQ8NEZ4 4911 aaKnown RBP12.34□□□□□ -0.43
SSSCA1-201ENST00000309328 PPBPP02775 128 aa12.33□□□□□ -0.44
SSSCA1-201ENST00000309328 AMN1Q8IY45 258 aa12.33□□□□□ -0.44
SSSCA1-201ENST00000309328 RNF185Q96GF1 192 aa12.33□□□□□ -0.44
SSSCA1-201ENST00000309328 SACSQ9NZJ4 4579 aa12.33□□□□□ -0.44
SSSCA1-201ENST00000309328 TRBV6-5A0A0K0K1A5 114 aa12.31□□□□□ -0.44
SSSCA1-201ENST00000309328 PKIAP61925 76 aa12.31□□□□□ -0.44
SSSCA1-201ENST00000309328 TTC32Q5I0X7 151 aa12.31□□□□□ -0.44
SSSCA1-201ENST00000309328 Q9H8V8 135 aa12.31□□□□□ -0.44
SSSCA1-201ENST00000309328 Q9UF83 564 aa12.31□□□□□ -0.44
SSSCA1-201ENST00000309328 TRAV26-2A0A0B4J265 109 aa12.3□□□□□ -0.44
SSSCA1-201ENST00000309328 SIVA1O15304 175 aa12.3□□□□□ -0.44
SSSCA1-201ENST00000309328 OR10J3Q5JRS4 329 aa12.3□□□□□ -0.44
SSSCA1-201ENST00000309328 TRAV9-2A0A087WT02 112 aa12.29□□□□□ -0.44
SSSCA1-201ENST00000309328 PHOX2AO14813 284 aa12.29□□□□□ -0.44
SSSCA1-201ENST00000309328 CKS2P33552 79 aa12.29□□□□□ -0.44
SSSCA1-201ENST00000309328 ST20Q9HBF5 79 aa12.29□□□□□ -0.44
SSSCA1-201ENST00000309328 URGCP-MRPS24S4R325 110 aa12.29□□□□□ -0.44
SSSCA1-201ENST00000309328 HLA-DQA1P01909 254 aa12.28□□□□□ -0.44
SSSCA1-201ENST00000309328 MT-ND6P03923 174 aa12.28□□□□□ -0.44
SSSCA1-201ENST00000309328 BTF3P20290 206 aaKnown RBP12.28□□□□□ -0.44
SSSCA1-201ENST00000309328 MRPL51Q4U2R6 128 aaKnown RBP12.28□□□□□ -0.44
SSSCA1-201ENST00000309328 ORMDL3Q8N138 153 aa12.28□□□□□ -0.44
SSSCA1-201ENST00000309328 LAMTOR2Q9Y2Q5 125 aa12.28□□□□□ -0.44
SSSCA1-201ENST00000309328 TRBV6-8A0A0A6YYG3 113 aa12.27□□□□□ -0.45
SSSCA1-201ENST00000309328 IGHV3-38A0A0C4DH36 116 aa12.27□□□□□ -0.45
SSSCA1-201ENST00000309328 NCR2O95944 276 aa12.27□□□□□ -0.45
SSSCA1-201ENST00000309328 C10orf126Q8N4M7 172 aa12.27□□□□□ -0.45
SSSCA1-201ENST00000309328 C20orf78Q9BR46 151 aa12.27□□□□□ -0.45
SSSCA1-201ENST00000309328 CHCHD7Q9BUK0 85 aa12.27□□□□□ -0.45
SSSCA1-201ENST00000309328 GNB1LQ9BYB4 327 aa12.27□□□□□ -0.45
SSSCA1-201ENST00000309328 TRBV24-1A0A075B6N3 115 aa12.26□□□□□ -0.45
SSSCA1-201ENST00000309328 TRBV25-1A0A075B6N4 114 aa12.26□□□□□ -0.45
SSSCA1-201ENST00000309328 SDHAF1A6NFY7 115 aa12.26□□□□□ -0.45
SSSCA1-201ENST00000309328 TCAPO15273 167 aa12.26□□□□□ -0.45
SSSCA1-201ENST00000309328 DNAH10OSP0CZ25 163 aa12.26□□□□□ -0.45
SSSCA1-201ENST00000309328 COTL1Q14019 142 aa12.26□□□□□ -0.45
SSSCA1-201ENST00000309328 RPL39LQ96EH5 51 aaKnown RBP12.26□□□□□ -0.45
SSSCA1-201ENST00000309328 NBDYA0A0U1RRE5 68 aa12.25□□□□□ -0.45
SSSCA1-201ENST00000309328 SUMO2P61956 95 aaKnown RBP12.25□□□□□ -0.45
SSSCA1-201ENST00000309328 RPL32P62910 135 aaKnown RBP12.25□□□□□ -0.45
SSSCA1-201ENST00000309328 LINC01556Q5JQF7 62 aa12.25□□□□□ -0.45
SSSCA1-201ENST00000309328 SMCO4Q9NRQ5 59 aa12.25□□□□□ -0.45
SSSCA1-201ENST00000309328 IGHV1-24A0A0C4DH33 117 aa12.24□□□□□ -0.45
SSSCA1-201ENST00000309328 TRBV27A0A0K0K1C4 114 aa12.24□□□□□ -0.45
SSSCA1-201ENST00000309328 D6R8Y8 96 aa12.24□□□□□ -0.45
SSSCA1-201ENST00000309328 I3L3M4 83 aa12.24□□□□□ -0.45
SSSCA1-201ENST00000309328 IQCJQ1A5X6 159 aa12.24□□□□□ -0.45
SSSCA1-201ENST00000309328 NRACQ8N912 160 aa12.24□□□□□ -0.45
SSSCA1-201ENST00000309328 TMEM70Q9BUB7 260 aa12.24□□□□□ -0.45
SSSCA1-201ENST00000309328 DNAH6Q9C0G6 4158 aa12.23□□□□□ -0.45
SSSCA1-201ENST00000309328 VCYO14598 125 aa12.23□□□□□ -0.45
SSSCA1-201ENST00000309328 ELOBQ15370 118 aa12.23□□□□□ -0.45
SSSCA1-201ENST00000309328 TMEM136Q6ZRR5 245 aa12.23□□□□□ -0.45
SSSCA1-201ENST00000309328 WFDC10BQ8IUB3 73 aa12.23□□□□□ -0.45
SSSCA1-201ENST00000309328 PMCHP20382 165 aa12.22□□□□□ -0.45
SSSCA1-201ENST00000309328 RPS10P46783 165 aaKnown RBP12.22□□□□□ -0.45
SSSCA1-201ENST00000309328 POLR2KP53803 58 aaKnown RBP12.22□□□□□ -0.45
SSSCA1-201ENST00000309328 KIR2DL4Q99706 377 aa12.22□□□□□ -0.45
SSSCA1-201ENST00000309328 KMT2AQ03164 3969 aa12.22□□□□□ -0.45
SSSCA1-201ENST00000309328 IGLV2-18A0A075B6J9 118 aa12.21□□□□□ -0.45
SSSCA1-201ENST00000309328 TNFRSF6BO95407 300 aa12.21□□□□□ -0.45
SSSCA1-201ENST00000309328 APCSP02743 223 aa12.21□□□□□ -0.45
SSSCA1-201ENST00000309328 Q6ZR54 194 aa12.21□□□□□ -0.45
SSSCA1-201ENST00000309328 PRELID3AQ96N28 172 aa12.21□□□□□ -0.45
SSSCA1-201ENST00000309328 TMEM243Q9BU79 118 aa12.21□□□□□ -0.45
SSSCA1-201ENST00000309328 A0A087WX48 190 aa12.2□□□□□ -0.46
SSSCA1-201ENST00000309328 SMKR1H3BMG3 65 aa12.2□□□□□ -0.46
SSSCA1-201ENST00000309328 AMTP48728 403 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms