RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 ODF3Q96PU9 254 aa12.36□□□□□ -0.43
BRD3-201ENST00000303407 ANKRD29Q8N6D5 301 aa12.35□□□□□ -0.43
BRD3-201ENST00000303407 SND1-IT1Q9HBX3 110 aa12.35□□□□□ -0.43
BRD3-201ENST00000303407 IGLV2-11P01706 119 aa12.35□□□□□ -0.43
BRD3-201ENST00000303407 COX7A2LO14548 114 aa12.35□□□□□ -0.43
BRD3-201ENST00000303407 TMEM263Q8WUH6 116 aaKnown RBP12.35□□□□□ -0.43
BRD3-201ENST00000303407 ORMDL1Q9P0S3 153 aa12.35□□□□□ -0.43
BRD3-201ENST00000303407 CHD3Q12873 2000 aaKnown RBP12.35□□□□□ -0.43
BRD3-201ENST00000303407 LGALS9O00182 355 aa12.35□□□□□ -0.43
BRD3-201ENST00000303407 VSIG2Q96IQ7 327 aa12.35□□□□□ -0.43
BRD3-201ENST00000303407 IGHV3-30P01768 117 aa12.35□□□□□ -0.43
BRD3-201ENST00000303407 IGHV3-33P01772 117 aa12.35□□□□□ -0.43
BRD3-201ENST00000303407 P0DMU3 169 aa12.35□□□□□ -0.43
BRD3-201ENST00000303407 FAM231AP0DMU4 169 aa12.35□□□□□ -0.43
BRD3-201ENST00000303407 FAM231CP0DMU5 169 aa12.35□□□□□ -0.43
BRD3-201ENST00000303407 IGHV3-30-3P0DP02 117 aa12.35□□□□□ -0.43
BRD3-201ENST00000303407 IGHV3-30-5P0DP03 117 aa12.35□□□□□ -0.43
BRD3-201ENST00000303407 HAMPP81172 84 aa12.34□□□□□ -0.43
BRD3-201ENST00000303407 CEMP1Q6PRD7 247 aaPredicted RBP12.34□□□□□ -0.43
BRD3-201ENST00000303407 LRRC75A-AS1Q8N1F1 130 aa12.34□□□□□ -0.43
BRD3-201ENST00000303407 TMEM126AQ9H061 195 aa12.34□□□□□ -0.43
BRD3-201ENST00000303407 CLPSL1A2RUU4 121 aa12.33□□□□□ -0.43
BRD3-201ENST00000303407 ZMAT4Q9H898 229 aa12.33□□□□□ -0.43
BRD3-201ENST00000303407 ARFGEF3Q5TH69 2177 aa12.33□□□□□ -0.43
BRD3-201ENST00000303407 Q9HAA7 133 aa12.33□□□□□ -0.44
BRD3-201ENST00000303407 COL5A1P20908 1838 aaPredicted RBP12.33□□□□□ -0.44
BRD3-201ENST00000303407 IGHV1-58A0A0C4DH39 117 aa12.33□□□□□ -0.44
BRD3-201ENST00000303407 Q8N6K4 173 aa12.33□□□□□ -0.44
BRD3-201ENST00000303407 DEFB4AO15263 64 aa12.32□□□□□ -0.44
BRD3-201ENST00000303407 K7EQG2 157 aa12.32□□□□□ -0.44
BRD3-201ENST00000303407 U3KQK5 164 aa12.32□□□□□ -0.44
BRD3-201ENST00000303407 WFDC2Q14508 124 aa12.32□□□□□ -0.44
BRD3-201ENST00000303407 TNRC6BQ9UPQ9 1833 aaKnown RBP12.32□□□□□ -0.44
BRD3-201ENST00000303407 DEFB135Q30KP9 77 aa12.31□□□□□ -0.44
BRD3-201ENST00000303407 NBASA2RRP1 2371 aa12.31□□□□□ -0.44
BRD3-201ENST00000303407 HIST2H2BCQ6DN03 193 aa12.31□□□□□ -0.44
BRD3-201ENST00000303407 Q6ZUT4 128 aa12.31□□□□□ -0.44
BRD3-201ENST00000303407 C1orf43Q9BWL3 253 aa12.31□□□□□ -0.44
BRD3-201ENST00000303407 RNF185Q96GF1 192 aa12.31□□□□□ -0.44
BRD3-201ENST00000303407 RBMY1FQ15415 496 aaKnown RBP12.31□□□□□ -0.44
BRD3-201ENST00000303407 NFE4Q86UQ8 179 aa12.31□□□□□ -0.44
BRD3-201ENST00000303407 TP73-AS1Q9UF72 201 aa12.3□□□□□ -0.44
BRD3-201ENST00000303407 LINC01620Q4KN68 170 aa12.3□□□□□ -0.44
BRD3-201ENST00000303407 RNASE8Q8TDE3 154 aaKnown RBP12.3□□□□□ -0.44
BRD3-201ENST00000303407 CAMK2N2Q96S95 79 aa12.29□□□□□ -0.44
BRD3-201ENST00000303407 SPANXDQ9BXN6 97 aa12.29□□□□□ -0.44
BRD3-201ENST00000303407 NEXN-AS1Q8NBZ9 246 aa12.29□□□□□ -0.44
BRD3-201ENST00000303407 RPL18AQ02543 176 aaKnown RBP12.29□□□□□ -0.44
BRD3-201ENST00000303407 C10orf99Q6UWK7 81 aa12.29□□□□□ -0.44
BRD3-201ENST00000303407 KIAA1549Q9HCM3 1950 aa12.29□□□□□ -0.44
BRD3-201ENST00000303407 ABCA4P78363 2273 aa12.28□□□□□ -0.44
BRD3-201ENST00000303407 CRYBA4P53673 196 aa12.28□□□□□ -0.44
BRD3-201ENST00000303407 ZFAND2AQ8N6M9 145 aa12.28□□□□□ -0.44
BRD3-201ENST00000303407 IGHV4-4A0A075B6R2 117 aa12.27□□□□□ -0.44
BRD3-201ENST00000303407 H0YGX0 51 aa12.27□□□□□ -0.45
BRD3-201ENST00000303407 NCR3O14931 201 aa12.27□□□□□ -0.45
BRD3-201ENST00000303407 CLEC2BQ92478 149 aa12.27□□□□□ -0.45
BRD3-201ENST00000303407 CDSNQ15517 529 aa12.27□□□□□ -0.45
BRD3-201ENST00000303407 DEFB114Q30KQ6 69 aa12.27□□□□□ -0.45
BRD3-201ENST00000303407 TEN1Q86WV5 123 aa12.27□□□□□ -0.45
BRD3-201ENST00000303407 CPAMD8Q8IZJ3 1885 aa12.26□□□□□ -0.45
BRD3-201ENST00000303407 RS1O15537 224 aa12.26□□□□□ -0.45
BRD3-201ENST00000303407 DEFB105AQ8NG35 78 aa12.26□□□□□ -0.45
BRD3-201ENST00000303407 TRBV10-1A0A0K0K1A3 114 aa12.26□□□□□ -0.45
BRD3-201ENST00000303407 Q6ZTI0 123 aa12.26□□□□□ -0.45
BRD3-201ENST00000303407 NDUFA11Q86Y39 141 aa12.26□□□□□ -0.45
BRD3-201ENST00000303407 ACYP1P07311 99 aa12.26□□□□□ -0.45
BRD3-201ENST00000303407 WFDC11Q8NEX6 87 aa12.25□□□□□ -0.45
BRD3-201ENST00000303407 FOXI1Q12951 378 aa12.24□□□□□ -0.45
BRD3-201ENST00000303407 MIR7-3HGQ8N6C7 128 aa12.24□□□□□ -0.45
BRD3-201ENST00000303407 PSMB8P28062 276 aa12.23□□□□□ -0.45
BRD3-201ENST00000303407 LINC00467Q9BRT7 94 aa12.23□□□□□ -0.45
BRD3-201ENST00000303407 MIAQ16674 131 aa12.23□□□□□ -0.45
BRD3-201ENST00000303407 A0A0J9YXY3 114 aa12.23□□□□□ -0.45
BRD3-201ENST00000303407 TRBV10-2A0A0K0K1G8 114 aa12.23□□□□□ -0.45
BRD3-201ENST00000303407 F8W735 103 aaPredicted RBP12.23□□□□□ -0.45
BRD3-201ENST00000303407 INSL3P51460 131 aa12.23□□□□□ -0.45
BRD3-201ENST00000303407 PRO0255Q9UI72 69 aa12.22□□□□□ -0.45
BRD3-201ENST00000303407 ABCA1O95477 2261 aa12.22□□□□□ -0.45
BRD3-201ENST00000303407 PRR9Q5T870 116 aa12.22□□□□□ -0.45
BRD3-201ENST00000303407 ZNF702PQ9H963 129 aa12.22□□□□□ -0.45
BRD3-201ENST00000303407 HIST2H2BDQ6DRA6 164 aa12.21□□□□□ -0.45
BRD3-201ENST00000303407 M0QY20 66 aa12.21□□□□□ -0.46
BRD3-201ENST00000303407 CXCL5P42830 114 aa12.21□□□□□ -0.46
BRD3-201ENST00000303407 G3V4G9 280 aa12.21□□□□□ -0.46
BRD3-201ENST00000303407 NDUFA1O15239 70 aa12.21□□□□□ -0.46
BRD3-201ENST00000303407 CCL18P55774 89 aa12.2□□□□□ -0.46
BRD3-201ENST00000303407 UBE2BP63146 152 aa12.2□□□□□ -0.46
BRD3-201ENST00000303407 CFAP126Q5VTH2 177 aa12.2□□□□□ -0.46
BRD3-201ENST00000303407 TMEM223A0PJW6 202 aa12.2□□□□□ -0.46
BRD3-201ENST00000303407 Q6ZSV7 163 aa12.2□□□□□ -0.46
BRD3-201ENST00000303407 C11orf21Q9P2W6 132 aa12.2□□□□□ -0.46
BRD3-201ENST00000303407 TRACP01848 142 aa12.2□□□□□ -0.46
BRD3-201ENST00000303407 ZNF843Q8N446 348 aa12.2□□□□□ -0.46
BRD3-201ENST00000303407 IGLV4-3A0A075B6K6 122 aa12.2□□□□□ -0.46
BRD3-201ENST00000303407 TCL1BO95988 128 aa12.2□□□□□ -0.46
BRD3-201ENST00000303407 Q6ZS46 218 aa12.2□□□□□ -0.46
BRD3-201ENST00000303407 KLK12Q9UKR0 248 aa12.2□□□□□ -0.46
BRD3-201ENST00000303407 IGKV2D-26A0A0A0MRZ7 120 aa12.19□□□□□ -0.46
BRD3-201ENST00000303407 SPAG11BQ08648 103 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms