RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 TRBV10-1A0A0K0K1A3 114 aa5.9□□□□□ -1.47
SF3B3-201ENST00000302516 P0C879 139 aa5.9□□□□□ -1.47
SF3B3-201ENST00000302516 IGKV3D-7A0A0C4DH55 119 aa5.9□□□□□ -1.47
SF3B3-201ENST00000302516 P0DMU3 169 aa5.9□□□□□ -1.47
SF3B3-201ENST00000302516 FAM231AP0DMU4 169 aa5.9□□□□□ -1.47
SF3B3-201ENST00000302516 FAM231CP0DMU5 169 aa5.9□□□□□ -1.47
SF3B3-201ENST00000302516 CTSZQ9UBR2 303 aa5.9□□□□□ -1.47
SF3B3-201ENST00000302516 GATA1P15976 413 aaPredicted RBP5.89□□□□□ -1.47
SF3B3-201ENST00000302516 TM2D2Q9BX73 214 aa5.89□□□□□ -1.47
SF3B3-201ENST00000302516 FGF23Q9GZV9 251 aaPredicted RBP5.89□□□□□ -1.47
SF3B3-201ENST00000302516 SPANXB1Q9NS25 103 aaPredicted RBP5.89□□□□□ -1.47
SF3B3-201ENST00000302516 PLA2G2EQ9NZK7 142 aa5.89□□□□□ -1.47
SF3B3-201ENST00000302516 NDUFC1O43677 76 aa5.89□□□□□ -1.47
SF3B3-201ENST00000302516 IGFL2Q6UWQ7 119 aa5.89□□□□□ -1.47
SF3B3-201ENST00000302516 TMEM263Q8WUH6 116 aaKnown RBP5.89□□□□□ -1.47
SF3B3-201ENST00000302516 COL4A3Q01955 1670 aa5.89□□□□□ -1.47
SF3B3-201ENST00000302516 A0A0J9YXV3 536 aa5.89□□□□□ -1.47
SF3B3-201ENST00000302516 LINC00574Q9H8X3 128 aa5.89□□□□□ -1.47
SF3B3-201ENST00000302516 C2orf70A6NJV1 201 aa5.89□□□□□ -1.47
SF3B3-201ENST00000302516 SPART-AS1P0CW21 52 aa5.89□□□□□ -1.47
SF3B3-201ENST00000302516 TCL1BO95988 128 aa5.89□□□□□ -1.47
SF3B3-201ENST00000302516 MUC6Q6W4X9 2439 aa5.89□□□□□ -1.47
SF3B3-201ENST00000302516 SORL1Q92673 2214 aa5.89□□□□□ -1.47
SF3B3-201ENST00000302516 PRR30Q53SZ7 412 aaPredicted RBP5.89□□□□□ -1.47
SF3B3-201ENST00000302516 PRSS33Q8NF86 280 aa5.89□□□□□ -1.47
SF3B3-201ENST00000302516 UPK3BQ9BT76 320 aa5.89□□□□□ -1.47
SF3B3-201ENST00000302516 IMUPQ9GZP8 106 aa5.89□□□□□ -1.47
SF3B3-201ENST00000302516 PIP4P1Q86T03 277 aa5.88□□□□□ -1.47
SF3B3-201ENST00000302516 SP5Q6BEB4 398 aaPredicted RBP5.88□□□□□ -1.47
SF3B3-201ENST00000302516 DEFB105AQ8NG35 78 aa5.88□□□□□ -1.47
SF3B3-201ENST00000302516 RPL39P62891 51 aaKnown RBP5.88□□□□□ -1.47
SF3B3-201ENST00000302516 Q6ZQT7 251 aa5.88□□□□□ -1.47
SF3B3-201ENST00000302516 V9GYY9 64 aa5.88□□□□□ -1.47
SF3B3-201ENST00000302516 TET2Q6N021 2002 aaPredicted RBP5.88□□□□□ -1.47
SF3B3-201ENST00000302516 LECT2O14960 151 aa5.88□□□□□ -1.47
SF3B3-201ENST00000302516 CLEC2BQ92478 149 aa5.88□□□□□ -1.47
SF3B3-201ENST00000302516 HIST2H2BDQ6DRA6 164 aa5.87□□□□□ -1.47
SF3B3-201ENST00000302516 C3orf22Q8N5N4 141 aa5.87□□□□□ -1.47
SF3B3-201ENST00000302516 U3KQK5 164 aa5.87□□□□□ -1.47
SF3B3-201ENST00000302516 IGHV3-30-3P0DP02 117 aa5.87□□□□□ -1.47
SF3B3-201ENST00000302516 C20orf203Q8NBC4 194 aa5.87□□□□□ -1.47
SF3B3-201ENST00000302516 CGB7P0DN87 165 aa5.87□□□□□ -1.47
SF3B3-201ENST00000302516 IGKV1OR2-108A0A075B7D4 117 aa5.87□□□□□ -1.47
SF3B3-201ENST00000302516 CSPG4Q6UVK1 2322 aa5.87□□□□□ -1.47
SF3B3-201ENST00000302516 RS1O15537 224 aa5.87□□□□□ -1.47
SF3B3-201ENST00000302516 COX7BP24311 80 aa5.87□□□□□ -1.47
SF3B3-201ENST00000302516 C5orf38Q86SI9 138 aa5.87□□□□□ -1.47
SF3B3-201ENST00000302516 ODF3L1Q8IXM7 274 aa5.86□□□□□ -1.47
SF3B3-201ENST00000302516 HHLA3Q9XRX5 114 aa5.86□□□□□ -1.47
SF3B3-201ENST00000302516 TRAV26-1A0A087WT03 109 aa5.86□□□□□ -1.47
SF3B3-201ENST00000302516 SEC61GP60059 68 aa5.86□□□□□ -1.47
SF3B3-201ENST00000302516 C14orf177Q52M58 125 aa5.86□□□□□ -1.47
SF3B3-201ENST00000302516 NEXN-AS1Q8NBZ9 246 aa5.86□□□□□ -1.47
SF3B3-201ENST00000302516 AJUBAQ96IF1 538 aa5.86□□□□□ -1.47
SF3B3-201ENST00000302516 FAM236DA0A1B0GTK5 79 aa5.86□□□□□ -1.47
SF3B3-201ENST00000302516 FSTL3O95633 263 aa5.86□□□□□ -1.47
SF3B3-201ENST00000302516 FAM236CP0DP71 79 aa5.86□□□□□ -1.47
SF3B3-201ENST00000302516 NFE4Q86UQ8 179 aa5.86□□□□□ -1.47
SF3B3-201ENST00000302516 MSRB1Q9NZV6 116 aa5.86□□□□□ -1.47
SF3B3-201ENST00000302516 NCOR2Q9Y618 2525 aa5.85□□□□□ -1.47
SF3B3-201ENST00000302516 CCL18P55774 89 aa5.85□□□□□ -1.47
SF3B3-201ENST00000302516 Q8N9W7 124 aa5.85□□□□□ -1.47
SF3B3-201ENST00000302516 PTPRQQ9UMZ3 2332 aa5.85□□□□□ -1.47
SF3B3-201ENST00000302516 TIMM17BO60830 172 aa5.85□□□□□ -1.47
SF3B3-201ENST00000302516 IGHV4-59P01825 116 aa5.85□□□□□ -1.47
SF3B3-201ENST00000302516 SLURP1P55000 103 aa5.85□□□□□ -1.47
SF3B3-201ENST00000302516 RITA1Q96K30 269 aa5.85□□□□□ -1.47
SF3B3-201ENST00000302516 NDUFC2-KCTD14E9PQ53 114 aa5.85□□□□□ -1.47
SF3B3-201ENST00000302516 DEFB112Q30KQ8 113 aa5.85□□□□□ -1.47
SF3B3-201ENST00000302516 C14orf132Q9NPU4 83 aa5.85□□□□□ -1.47
SF3B3-201ENST00000302516 SONP18583 2426 aaKnown RBP5.85□□□□□ -1.47
SF3B3-201ENST00000302516 DAND5Q8N907 189 aa5.85□□□□□ -1.47
SF3B3-201ENST00000302516 NCR3O14931 201 aa5.84□□□□□ -1.47
SF3B3-201ENST00000302516 GPR179Q6PRD1 2367 aa5.84□□□□□ -1.47
SF3B3-201ENST00000302516 TRBV30A0A0K0K1B3 111 aa5.84□□□□□ -1.47
SF3B3-201ENST00000302516 UFSP1Q6NVU6 142 aa5.84□□□□□ -1.47
SF3B3-201ENST00000302516 A0A096LPF7 62 aa5.84□□□□□ -1.47
SF3B3-201ENST00000302516 IGLV1-47P01700 117 aa5.84□□□□□ -1.47
SF3B3-201ENST00000302516 TEX49A0A1B0GTD5 131 aa5.84□□□□□ -1.47
SF3B3-201ENST00000302516 SPAG11BQ08648 103 aa5.84□□□□□ -1.47
SF3B3-201ENST00000302516 MIR7-3HGQ8N6C7 128 aa5.84□□□□□ -1.47
SF3B3-201ENST00000302516 A0A0J9YX75 114 aa5.84□□□□□ -1.47
SF3B3-201ENST00000302516 A0A0J9YY99 117 aa5.84□□□□□ -1.47
SF3B3-201ENST00000302516 IGLC6P0CF74 106 aa5.84□□□□□ -1.47
SF3B3-201ENST00000302516 IGHV4-4A0A075B6R2 117 aa5.84□□□□□ -1.48
SF3B3-201ENST00000302516 UBE2AP49459 152 aa5.84□□□□□ -1.48
SF3B3-201ENST00000302516 KIR2DL5BQ8NHK3 375 aa5.84□□□□□ -1.48
SF3B3-201ENST00000302516 SPRY4Q9C004 299 aa5.84□□□□□ -1.48
SF3B3-201ENST00000302516 INSL3P51460 131 aa5.84□□□□□ -1.48
SF3B3-201ENST00000302516 C10orf105Q8TEF2 133 aa5.84□□□□□ -1.48
SF3B3-201ENST00000302516 B9D2Q9BPU9 175 aa5.84□□□□□ -1.48
SF3B3-201ENST00000302516 TP73-AS1Q9UF72 201 aa5.84□□□□□ -1.48
SF3B3-201ENST00000302516 BRK1Q8WUW1 75 aa5.83□□□□□ -1.48
SF3B3-201ENST00000302516 YPEL4Q96NS1 127 aa5.83□□□□□ -1.48
SF3B3-201ENST00000302516 PRR15LQ9BU68 103 aa5.83□□□□□ -1.48
SF3B3-201ENST00000302516 FAM240AA0A1B0GVK7 77 aa5.83□□□□□ -1.48
SF3B3-201ENST00000302516 IBA57-AS1B1ANH7 110 aa5.83□□□□□ -1.48
SF3B3-201ENST00000302516 NDUFA7O95182 113 aa5.83□□□□□ -1.48
SF3B3-201ENST00000302516 FAM222AQ5U5X8 452 aa5.83□□□□□ -1.48
SF3B3-201ENST00000302516 APRG1Q8IVJ8 170 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms