RNA–Protein interactions for RNA: ENST00000297784.9

TMC1-201, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-201ENST00000297784 GAGE2BQ13066 116 aa5.01□□□□□ -1.61
TMC1-201ENST00000297784 GAGE2EQ4V326 116 aa5.01□□□□□ -1.61
TMC1-201ENST00000297784 TMEM78Q5T7P6 136 aa5.01□□□□□ -1.61
TMC1-201ENST00000297784 RNF152Q8N8N0 203 aa5.01□□□□□ -1.61
TMC1-201ENST00000297784 PTH2Q96A98 100 aa5.01□□□□□ -1.61
TMC1-201ENST00000297784 GAGE2DQ9UEU5 116 aa5.01□□□□□ -1.61
TMC1-201ENST00000297784 TNFRSF18Q9Y5U5 241 aa5.01□□□□□ -1.61
TMC1-201ENST00000297784 FABP5P3A8MUU1 101 aa5.01□□□□□ -1.61
TMC1-201ENST00000297784 IGHV3-11P01762 117 aa5.01□□□□□ -1.61
TMC1-201ENST00000297784 ZFP2Q6ZN57 461 aa5.01□□□□□ -1.61
TMC1-201ENST00000297784 ANKRD29Q8N6D5 301 aa5.01□□□□□ -1.61
TMC1-201ENST00000297784 NRACQ8N912 160 aa5.01□□□□□ -1.61
TMC1-201ENST00000297784 RNF125Q96EQ8 232 aa5.01□□□□□ -1.61
TMC1-201ENST00000297784 TCL1BO95988 128 aa5□□□□□ -1.61
TMC1-201ENST00000297784 C18orf65Q6ZTR6 163 aa5□□□□□ -1.61
TMC1-201ENST00000297784 EEF1AKMT3Q96AZ1 226 aa5□□□□□ -1.61
TMC1-201ENST00000297784 IFITM1P13164 125 aa5□□□□□ -1.61
TMC1-201ENST00000297784 ZNF80P51504 273 aaPredicted RBP5□□□□□ -1.61
TMC1-201ENST00000297784 UNQ9165/PRO28630Q6UXU0 137 aa5□□□□□ -1.61
TMC1-201ENST00000297784 NDUFA11Q86Y39 141 aa5□□□□□ -1.61
TMC1-201ENST00000297784 USMG5Q96IX5 58 aa5□□□□□ -1.61
TMC1-201ENST00000297784 MSRB1Q9NZV6 116 aa5□□□□□ -1.61
TMC1-201ENST00000297784 LOC107984156A0A0G2JMH3 177 aa4.99□□□□□ -1.61
TMC1-201ENST00000297784 ARL17AQ8IVW1 177 aa4.99□□□□□ -1.61
TMC1-201ENST00000297784 NEXN-AS1Q8NBZ9 246 aa4.99□□□□□ -1.61
TMC1-201ENST00000297784 C2CD3Q4AC94 2353 aa4.99□□□□□ -1.61
TMC1-201ENST00000297784 CCDC179H3BU77 68 aa4.99□□□□□ -1.61
TMC1-201ENST00000297784 GATA1P15976 413 aaPredicted RBP4.99□□□□□ -1.61
TMC1-201ENST00000297784 LINC01006Q8NI28 216 aa4.99□□□□□ -1.61
TMC1-201ENST00000297784 IGHV4-4A0A075B6R2 117 aa4.99□□□□□ -1.61
TMC1-201ENST00000297784 TMEM89A2RUT3 159 aa4.99□□□□□ -1.61
TMC1-201ENST00000297784 SNCGO76070 127 aa4.99□□□□□ -1.61
TMC1-201ENST00000297784 EDN2P20800 178 aa4.99□□□□□ -1.61
TMC1-201ENST00000297784 SMIM20Q8N5G0 67 aa4.99□□□□□ -1.61
TMC1-201ENST00000297784 TOMM6Q96B49 74 aa4.99□□□□□ -1.61
TMC1-201ENST00000297784 PRADC1Q9BSG0 188 aa4.99□□□□□ -1.61
TMC1-201ENST00000297784 IGKV2-40A0A087WW87 121 aaPredicted RBP4.98□□□□□ -1.61
TMC1-201ENST00000297784 CRLF1O75462 422 aa4.98□□□□□ -1.61
TMC1-201ENST00000297784 IGKV2D-40P01614 121 aaPredicted RBP4.98□□□□□ -1.61
TMC1-201ENST00000297784 SCGB1C2P0DMR2 95 aa4.98□□□□□ -1.61
TMC1-201ENST00000297784 MRPL23Q16540 153 aaKnown RBP4.98□□□□□ -1.61
TMC1-201ENST00000297784 TTC32Q5I0X7 151 aa4.98□□□□□ -1.61
TMC1-201ENST00000297784 KIR2DL4Q99706 377 aa4.98□□□□□ -1.61
TMC1-201ENST00000297784 C16orf95Q9H693 158 aa4.98□□□□□ -1.61
TMC1-201ENST00000297784 SMAD5-AS1Q9Y6J3 95 aa4.98□□□□□ -1.61
TMC1-201ENST00000297784 ZNF815PA8K554 130 aa4.98□□□□□ -1.61
TMC1-201ENST00000297784 ARL3P36405 182 aa4.98□□□□□ -1.61
TMC1-201ENST00000297784 ORMDL2Q53FV1 153 aa4.98□□□□□ -1.61
TMC1-201ENST00000297784 C10orf126Q8N4M7 172 aa4.98□□□□□ -1.61
TMC1-201ENST00000297784 MDFICQ9P1T7 246 aa4.98□□□□□ -1.61
TMC1-201ENST00000297784 BUB3O43684 328 aa4.97□□□□□ -1.61
TMC1-201ENST00000297784 ELANEP08246 267 aa4.97□□□□□ -1.61
TMC1-201ENST00000297784 RPL13AP40429 203 aaKnown RBP4.97□□□□□ -1.61
TMC1-201ENST00000297784 ERCC8Q13216 396 aa4.97□□□□□ -1.61
TMC1-201ENST00000297784 UBE2E2Q96LR5 201 aa4.97□□□□□ -1.61
TMC1-201ENST00000297784 U3KQE9 123 aa4.97□□□□□ -1.61
TMC1-201ENST00000297784 TRAV4A0A0B4J268 109 aa4.97□□□□□ -1.61
TMC1-201ENST00000297784 SLC25A20O43772 301 aa4.97□□□□□ -1.61
TMC1-201ENST00000297784 ORM1P02763 201 aa4.97□□□□□ -1.61
TMC1-201ENST00000297784 RPL7P18124 248 aaKnown RBP4.97□□□□□ -1.61
TMC1-201ENST00000297784 HLA-DMBP28068 263 aa4.97□□□□□ -1.61
TMC1-201ENST00000297784 KRTAP10-3P60369 221 aa4.97□□□□□ -1.61
TMC1-201ENST00000297784 SRSF9Q13242 221 aaKnown RBP eCLIP4.97□□□□□ -1.61
TMC1-201ENST00000297784 PLEKHB2Q96CS7 222 aa4.97□□□□□ -1.61
TMC1-201ENST00000297784 SMIM2Q9BVW6 85 aa4.97□□□□□ -1.61
TMC1-201ENST00000297784 TMEM126AQ9H061 195 aa4.97□□□□□ -1.61
TMC1-201ENST00000297784 JMJD1CQ15652 2540 aa4.97□□□□□ -1.61
TMC1-201ENST00000297784 A0A0J9YY99 117 aa4.97□□□□□ -1.61
TMC1-201ENST00000297784 RBAKDNA6NC62 111 aa4.97□□□□□ -1.61
TMC1-201ENST00000297784 CFC1BP0CG36 223 aa4.97□□□□□ -1.61
TMC1-201ENST00000297784 CFC1P0CG37 223 aa4.97□□□□□ -1.61
TMC1-201ENST00000297784 P0DMU3 169 aa4.97□□□□□ -1.61
TMC1-201ENST00000297784 FAM231AP0DMU4 169 aa4.97□□□□□ -1.61
TMC1-201ENST00000297784 FAM231CP0DMU5 169 aa4.97□□□□□ -1.61
TMC1-201ENST00000297784 OR10J6PQ8NGY7 276 aa4.97□□□□□ -1.61
TMC1-201ENST00000297784 IGHV3-66A0A0C4DH42 116 aa4.96□□□□□ -1.62
TMC1-201ENST00000297784 IGHV3-30P01768 117 aa4.96□□□□□ -1.62
TMC1-201ENST00000297784 IGHV3-30-5P0DP03 117 aa4.96□□□□□ -1.62
TMC1-201ENST00000297784 DEFB136Q30KP8 78 aa4.96□□□□□ -1.62
TMC1-201ENST00000297784 SCGB1D4Q6XE38 83 aa4.96□□□□□ -1.62
TMC1-201ENST00000297784 SCGB3A1Q96QR1 104 aa4.96□□□□□ -1.62
TMC1-201ENST00000297784 ATRQ13535 2644 aa4.96□□□□□ -1.62
TMC1-201ENST00000297784 IGHV4OR15-8A0A075B7B6 117 aa4.96□□□□□ -1.62
TMC1-201ENST00000297784 IGHV3OR16-13A0A075B7E8 117 aa4.96□□□□□ -1.62
TMC1-201ENST00000297784 A0A087WW49 117 aa4.96□□□□□ -1.62
TMC1-201ENST00000297784 IGHV3-74A0A0B4J1X5 117 aa4.96□□□□□ -1.62
TMC1-201ENST00000297784 TRAV8-2A0A0B4J237 113 aa4.96□□□□□ -1.62
TMC1-201ENST00000297784 NDUFA4O00483 81 aa4.96□□□□□ -1.62
TMC1-201ENST00000297784 CD28P10747 220 aa4.96□□□□□ -1.62
TMC1-201ENST00000297784 PAPPA-AS1Q5QFB9 102 aa4.96□□□□□ -1.62
TMC1-201ENST00000297784 Q8TAT8 98 aa4.96□□□□□ -1.62
TMC1-201ENST00000297784 BAALCQ8WXS3 180 aa4.96□□□□□ -1.62
TMC1-201ENST00000297784 RASL10AQ92737 203 aa4.96□□□□□ -1.62
TMC1-201ENST00000297784 SLC50A1Q9BRV3 221 aa4.96□□□□□ -1.62
TMC1-201ENST00000297784 PRO1854Q9UHT4 67 aa4.96□□□□□ -1.62
TMC1-201ENST00000297784 IGHV3-49A0A0A0MS15 119 aa4.95□□□□□ -1.62
TMC1-201ENST00000297784 H3BVH4 76 aa4.95□□□□□ -1.62
TMC1-201ENST00000297784 PRB4P10163 310 aaPredicted RBP4.95□□□□□ -1.62
TMC1-201ENST00000297784 PROK1P58294 105 aa4.95□□□□□ -1.62
TMC1-201ENST00000297784 GPHB5Q86YW7 130 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms