RNA–Protein interactions for RNA: ENST00000285679.10

USP25-201, Transcript of ubiquitin specific peptidase 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP25, Length 3,973 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-201ENST00000285679 RELNP78509 3460 aa11.58□□□□□ -0.56
USP25-201ENST00000285679 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.58□□□□□ -0.56
USP25-201ENST00000285679 IFITM1P13164 125 aa11.58□□□□□ -0.56
USP25-201ENST00000285679 UBE2E1P51965 193 aa11.57□□□□□ -0.56
USP25-201ENST00000285679 C11orf68Q9H3H3 251 aaKnown RBP11.57□□□□□ -0.56
USP25-201ENST00000285679 ZNF292O60281 2723 aa11.57□□□□□ -0.56
USP25-201ENST00000285679 CDIP1Q9H305 208 aa11.57□□□□□ -0.56
USP25-201ENST00000285679 CLPSL1A2RUU4 121 aa11.56□□□□□ -0.56
USP25-201ENST00000285679 GAGE12JA6NER3 117 aa11.56□□□□□ -0.56
USP25-201ENST00000285679 GAGE7O76087 117 aa11.56□□□□□ -0.56
USP25-201ENST00000285679 GAGE12FP0CL80 117 aa11.56□□□□□ -0.56
USP25-201ENST00000285679 GAGE12GP0CL81 117 aa11.56□□□□□ -0.56
USP25-201ENST00000285679 GAGE12IP0CL82 117 aa11.56□□□□□ -0.56
USP25-201ENST00000285679 GAGE4Q13068 117 aa11.56□□□□□ -0.56
USP25-201ENST00000285679 ZFAND2AQ8N6M9 145 aa11.56□□□□□ -0.56
USP25-201ENST00000285679 ITLN2Q8WWU7 325 aaPredicted RBP11.56□□□□□ -0.56
USP25-201ENST00000285679 TRAV13-1A0A0B4J241 112 aa11.56□□□□□ -0.56
USP25-201ENST00000285679 CENPVL3A0A0U1RRI6 287 aa11.56□□□□□ -0.56
USP25-201ENST00000285679 PRM2P04554 102 aa11.56□□□□□ -0.56
USP25-201ENST00000285679 BLCAPP62952 87 aa11.56□□□□□ -0.56
USP25-201ENST00000285679 SRSF2Q01130 221 aaKnown RBP11.56□□□□□ -0.56
USP25-201ENST00000285679 OR13C6PQ8NH95 151 aa11.56□□□□□ -0.56
USP25-201ENST00000285679 CLEC2BQ92478 149 aa11.56□□□□□ -0.56
USP25-201ENST00000285679 PRO0461Q9UI25 63 aa11.56□□□□□ -0.56
USP25-201ENST00000285679 CUBNO60494 3623 aa11.56□□□□□ -0.56
USP25-201ENST00000285679 TSPEAR-AS2P59090 65 aa11.56□□□□□ -0.56
USP25-201ENST00000285679 MDFICQ9P1T7 246 aa11.56□□□□□ -0.56
USP25-201ENST00000285679 TRAV4A0A0B4J268 109 aa11.55□□□□□ -0.56
USP25-201ENST00000285679 LINC01620Q4KN68 170 aa11.55□□□□□ -0.56
USP25-201ENST00000285679 TMEM141Q96I45 108 aa11.55□□□□□ -0.56
USP25-201ENST00000285679 CARD19Q96LW7 228 aa11.55□□□□□ -0.56
USP25-201ENST00000285679 A8MZ25 164 aa11.55□□□□□ -0.56
USP25-201ENST00000285679 LY6G5BQ8NDX9 201 aa11.55□□□□□ -0.56
USP25-201ENST00000285679 NDUFA12Q9UI09 145 aa11.55□□□□□ -0.56
USP25-201ENST00000285679 ODF3BA8MYP8 253 aa11.55□□□□□ -0.56
USP25-201ENST00000285679 ATP5J2P56134 94 aa11.54□□□□□ -0.56
USP25-201ENST00000285679 Q8N1Y9 231 aa11.54□□□□□ -0.56
USP25-201ENST00000285679 ATP6V0E2Q8NHE4 81 aa11.54□□□□□ -0.56
USP25-201ENST00000285679 DAZ1Q9NQZ3 744 aaKnown RBP11.54□□□□□ -0.56
USP25-201ENST00000285679 P0DMU3 169 aa11.54□□□□□ -0.56
USP25-201ENST00000285679 FAM231AP0DMU4 169 aa11.54□□□□□ -0.56
USP25-201ENST00000285679 FAM231CP0DMU5 169 aa11.54□□□□□ -0.56
USP25-201ENST00000285679 ZNF580Q9UK33 172 aa11.54□□□□□ -0.56
USP25-201ENST00000285679 CIRBPQ14011 172 aaKnown RBP11.53□□□□□ -0.56
USP25-201ENST00000285679 ZNRF2Q8NHG8 242 aa11.53□□□□□ -0.56
USP25-201ENST00000285679 A0A1W2PRX2 142 aa11.53□□□□□ -0.56
USP25-201ENST00000285679 SLC25A29Q8N8R3 303 aa11.53□□□□□ -0.56
USP25-201ENST00000285679 IGHV3-30P01768 117 aa11.52□□□□□ -0.57
USP25-201ENST00000285679 IGHV3-30-5P0DP03 117 aa11.52□□□□□ -0.57
USP25-201ENST00000285679 UBE2D1P51668 147 aa11.52□□□□□ -0.57
USP25-201ENST00000285679 RNASE3P12724 160 aaKnown RBP11.52□□□□□ -0.57
USP25-201ENST00000285679 CDSNQ15517 529 aa11.52□□□□□ -0.57
USP25-201ENST00000285679 UBE2E2Q96LR5 201 aa11.52□□□□□ -0.57
USP25-201ENST00000285679 LINC01587Q99440 93 aa11.52□□□□□ -0.57
USP25-201ENST00000285679 SPENQ96T58 3664 aaKnown RBP11.52□□□□□ -0.57
USP25-201ENST00000285679 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.52□□□□□ -0.57
USP25-201ENST00000285679 IGKV2-29A2NJV5 120 aaPredicted RBP11.52□□□□□ -0.57
USP25-201ENST00000285679 MRPL53Q96EL3 112 aaKnown RBP11.51□□□□□ -0.57
USP25-201ENST00000285679 FAM223BA6NKX1 122 aa11.51□□□□□ -0.57
USP25-201ENST00000285679 Q6ZSV7 163 aa11.51□□□□□ -0.57
USP25-201ENST00000285679 FAM223AQ8IWN6 122 aa11.51□□□□□ -0.57
USP25-201ENST00000285679 IGHV1-69DA0A0B4J2H0 117 aa11.51□□□□□ -0.57
USP25-201ENST00000285679 NDUFA4O00483 81 aa11.51□□□□□ -0.57
USP25-201ENST00000285679 DYNLRB2Q8TF09 96 aa11.51□□□□□ -0.57
USP25-201ENST00000285679 EDN2P20800 178 aa11.5□□□□□ -0.57
USP25-201ENST00000285679 FHL3Q13643 280 aa11.5□□□□□ -0.57
USP25-201ENST00000285679 COX8CQ7Z4L0 72 aa11.5□□□□□ -0.57
USP25-201ENST00000285679 LENEPQ9Y5L5 61 aa11.5□□□□□ -0.57
USP25-201ENST00000285679 HOXD3P31249 432 aaPredicted RBP11.5□□□□□ -0.57
USP25-201ENST00000285679 C5orf56Q8N8D9 126 aa11.5□□□□□ -0.57
USP25-201ENST00000285679 CCDC179H3BU77 68 aa11.5□□□□□ -0.57
USP25-201ENST00000285679 I3L3M4 83 aa11.5□□□□□ -0.57
USP25-201ENST00000285679 K7ENP7 123 aa11.5□□□□□ -0.57
USP25-201ENST00000285679 AJUBAQ96IF1 538 aa11.5□□□□□ -0.57
USP25-201ENST00000285679 IGHV3-33P01772 117 aa11.49□□□□□ -0.57
USP25-201ENST00000285679 NDUFV3P56181 108 aaKnown RBP11.49□□□□□ -0.57
USP25-201ENST00000285679 SVEP1Q4LDE5 3571 aa11.49□□□□□ -0.57
USP25-201ENST00000285679 LEPROTO15243 131 aa11.48□□□□□ -0.57
USP25-201ENST00000285679 CRLF1O75462 422 aa11.48□□□□□ -0.57
USP25-201ENST00000285679 CRYGDP07320 174 aa11.48□□□□□ -0.57
USP25-201ENST00000285679 IGLV4-69A0A075B6H9 119 aa11.48□□□□□ -0.57
USP25-201ENST00000285679 RHODO00212 210 aa11.48□□□□□ -0.57
USP25-201ENST00000285679 UBE2D3P61077 147 aa11.48□□□□□ -0.57
USP25-201ENST00000285679 UBE2D2P62837 147 aa11.48□□□□□ -0.57
USP25-201ENST00000285679 IGHV3-30-3P0DP02 117 aa11.47□□□□□ -0.57
USP25-201ENST00000285679 C19orf54Q5BKX5 351 aa11.47□□□□□ -0.57
USP25-201ENST00000285679 IGHV1OR15-1A0A075B7D0 117 aa11.47□□□□□ -0.57
USP25-201ENST00000285679 TRIAP1O43715 76 aa11.47□□□□□ -0.57
USP25-201ENST00000285679 CFHR3Q02985 330 aa11.47□□□□□ -0.57
USP25-201ENST00000285679 SIRPDQ9H106 197 aa11.47□□□□□ -0.57
USP25-201ENST00000285679 DEFB136Q30KP8 78 aa11.47□□□□□ -0.57
USP25-201ENST00000285679 PSMG3-AS1Q96PY0 264 aa11.47□□□□□ -0.57
USP25-201ENST00000285679 TIMM17AQ99595 171 aa11.47□□□□□ -0.57
USP25-201ENST00000285679 Q8N6K4 173 aa11.46□□□□□ -0.57
USP25-201ENST00000285679 ICOSQ9Y6W8 199 aa11.46□□□□□ -0.57
USP25-201ENST00000285679 HERV-K104P63124 156 aa11.46□□□□□ -0.57
USP25-201ENST00000285679 CHCHD5Q9BSY4 110 aa11.46□□□□□ -0.57
USP25-201ENST00000285679 TSHBP01222 138 aa11.46□□□□□ -0.58
USP25-201ENST00000285679 UCNP55089 124 aa11.46□□□□□ -0.58
USP25-201ENST00000285679 DEFB131AP59861 70 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms