RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 PRO1854Q9UHT4 67 aa7.82□□□□□ -1.16
SKA1-201ENST00000285116 HIVEP2P31629 2446 aa7.81□□□□□ -1.16
SKA1-201ENST00000285116 SLC25A20O43772 301 aa7.81□□□□□ -1.16
SKA1-201ENST00000285116 IGHV3-30P01768 117 aa7.81□□□□□ -1.16
SKA1-201ENST00000285116 IGHV3-30-5P0DP03 117 aa7.81□□□□□ -1.16
SKA1-201ENST00000285116 NHLRC4P0CG21 123 aaPredicted RBP7.81□□□□□ -1.16
SKA1-201ENST00000285116 ARL3P36405 182 aa7.81□□□□□ -1.16
SKA1-201ENST00000285116 GAGE2BQ13066 116 aa7.81□□□□□ -1.16
SKA1-201ENST00000285116 GAGE2EQ4V326 116 aa7.81□□□□□ -1.16
SKA1-201ENST00000285116 GAGE2DQ9UEU5 116 aa7.81□□□□□ -1.16
SKA1-201ENST00000285116 ZNF580Q9UK33 172 aa7.81□□□□□ -1.16
SKA1-201ENST00000285116 SNCGO76070 127 aa7.8□□□□□ -1.16
SKA1-201ENST00000285116 KRTAP10-9P60411 292 aa7.8□□□□□ -1.16
SKA1-201ENST00000285116 SLC25A29Q8N8R3 303 aa7.8□□□□□ -1.16
SKA1-201ENST00000285116 C11orf86A6NJI1 115 aa7.8□□□□□ -1.16
SKA1-201ENST00000285116 RPL39LQ96EH5 51 aaKnown RBP7.8□□□□□ -1.16
SKA1-201ENST00000285116 KIF25-AS1Q9Y6Z4 181 aa7.8□□□□□ -1.16
SKA1-201ENST00000285116 CRYGDP07320 174 aa7.79□□□□□ -1.16
SKA1-201ENST00000285116 NDUFV3P56181 108 aaKnown RBP7.79□□□□□ -1.16
SKA1-201ENST00000285116 ATRQ13535 2644 aa7.79□□□□□ -1.16
SKA1-201ENST00000285116 IGLV4-69A0A075B6H9 119 aa7.79□□□□□ -1.16
SKA1-201ENST00000285116 IGHV3OR16-10A0A075B7F0 116 aa7.79□□□□□ -1.16
SKA1-201ENST00000285116 GAGE12JA6NER3 117 aa7.79□□□□□ -1.16
SKA1-201ENST00000285116 GAGE7O76087 117 aa7.79□□□□□ -1.16
SKA1-201ENST00000285116 TGFAP01135 160 aa7.79□□□□□ -1.16
SKA1-201ENST00000285116 GAGE12FP0CL80 117 aa7.79□□□□□ -1.16
SKA1-201ENST00000285116 GAGE12GP0CL81 117 aa7.79□□□□□ -1.16
SKA1-201ENST00000285116 GAGE12IP0CL82 117 aa7.79□□□□□ -1.16
SKA1-201ENST00000285116 GAGE4Q13068 117 aa7.79□□□□□ -1.16
SKA1-201ENST00000285116 Q6Q795 121 aa7.79□□□□□ -1.16
SKA1-201ENST00000285116 Q6ZQT7 251 aa7.79□□□□□ -1.16
SKA1-201ENST00000285116 C9JAW5 83 aa7.79□□□□□ -1.16
SKA1-201ENST00000285116 RNASE3P12724 160 aaKnown RBP7.79□□□□□ -1.16
SKA1-201ENST00000285116 KLLNB2CW77 178 aa7.78□□□□□ -1.16
SKA1-201ENST00000285116 IGHV1-69P01742 117 aa7.78□□□□□ -1.16
SKA1-201ENST00000285116 IGHG2P01859 326 aa7.78□□□□□ -1.16
SKA1-201ENST00000285116 LINC00315P59091 139 aa7.78□□□□□ -1.16
SKA1-201ENST00000285116 ANXA2RQ3ZCQ2 193 aa7.78□□□□□ -1.16
SKA1-201ENST00000285116 Q6ZS46 218 aa7.78□□□□□ -1.16
SKA1-201ENST00000285116 ODF3Q96PU9 254 aa7.78□□□□□ -1.16
SKA1-201ENST00000285116 PHLDA3Q9Y5J5 127 aa7.78□□□□□ -1.16
SKA1-201ENST00000285116 IGHV3OR16-13A0A075B7E8 117 aa7.78□□□□□ -1.16
SKA1-201ENST00000285116 IGHV3-74A0A0B4J1X5 117 aa7.78□□□□□ -1.16
SKA1-201ENST00000285116 DUSP14O95147 198 aaKnown RBP7.78□□□□□ -1.16
SKA1-201ENST00000285116 PMVKQ15126 192 aa7.78□□□□□ -1.16
SKA1-201ENST00000285116 TTC32Q5I0X7 151 aa7.78□□□□□ -1.16
SKA1-201ENST00000285116 C14orf178Q8N769 122 aaPredicted RBP7.78□□□□□ -1.16
SKA1-201ENST00000285116 TMEM141Q96I45 108 aa7.78□□□□□ -1.16
SKA1-201ENST00000285116 IGHV3-49A0A0A0MS15 119 aa7.77□□□□□ -1.17
SKA1-201ENST00000285116 K7EMT4 169 aa7.77□□□□□ -1.17
SKA1-201ENST00000285116 P0DMU3 169 aa7.77□□□□□ -1.17
SKA1-201ENST00000285116 FAM231AP0DMU4 169 aa7.77□□□□□ -1.17
SKA1-201ENST00000285116 FAM231CP0DMU5 169 aa7.77□□□□□ -1.17
SKA1-201ENST00000285116 IFITM1P13164 125 aa7.77□□□□□ -1.17
SKA1-201ENST00000285116 BPESC1Q9GZL8 116 aa7.77□□□□□ -1.17
SKA1-201ENST00000285116 SPANXA1Q9NS26 97 aa7.77□□□□□ -1.17
SKA1-201ENST00000285116 TRBV6-5A0A0K0K1A5 114 aa7.77□□□□□ -1.17
SKA1-201ENST00000285116 MGPP08493 103 aa7.77□□□□□ -1.17
SKA1-201ENST00000285116 S100A4P26447 101 aaKnown RBP7.77□□□□□ -1.17
SKA1-201ENST00000285116 UNQ9165/PRO28630Q6UXU0 137 aa7.77□□□□□ -1.17
SKA1-201ENST00000285116 TIMM17AQ99595 171 aa7.77□□□□□ -1.17
SKA1-201ENST00000285116 PDZD2O15018 2839 aa7.77□□□□□ -1.17
SKA1-201ENST00000285116 TRAV4A0A0B4J268 109 aa7.76□□□□□ -1.17
SKA1-201ENST00000285116 IGIPA6NJ69 53 aa7.76□□□□□ -1.17
SKA1-201ENST00000285116 TSHBP01222 138 aa7.76□□□□□ -1.17
SKA1-201ENST00000285116 POLR2KP53803 58 aaKnown RBP7.76□□□□□ -1.17
SKA1-201ENST00000285116 IGLV1-40P01703 118 aa7.76□□□□□ -1.17
SKA1-201ENST00000285116 IGHV3-33P01772 117 aa7.76□□□□□ -1.17
SKA1-201ENST00000285116 TSPEAR-AS2P59090 65 aa7.76□□□□□ -1.17
SKA1-201ENST00000285116 LINC01600Q96MT4 127 aa7.76□□□□□ -1.17
SKA1-201ENST00000285116 FAM110AQ9BQ89 295 aa7.76□□□□□ -1.17
SKA1-201ENST00000285116 A0A0B4J2C4 111 aa7.75□□□□□ -1.17
SKA1-201ENST00000285116 A6NDX4 124 aa7.75□□□□□ -1.17
SKA1-201ENST00000285116 TP53TG1Q9Y2A0 90 aa7.75□□□□□ -1.17
SKA1-201ENST00000285116 F8P00451 2351 aa7.75□□□□□ -1.17
SKA1-201ENST00000285116 A4D1N5 150 aa7.75□□□□□ -1.17
SKA1-201ENST00000285116 LGALS3P17931 250 aaKnown RBP7.75□□□□□ -1.17
SKA1-201ENST00000285116 EMP1P54849 157 aa7.75□□□□□ -1.17
SKA1-201ENST00000285116 TMEM170BQ5T4T1 132 aa7.75□□□□□ -1.17
SKA1-201ENST00000285116 TRPT1Q86TN4 253 aaKnown RBP7.75□□□□□ -1.17
SKA1-201ENST00000285116 Q8N1Y9 231 aa7.75□□□□□ -1.17
SKA1-201ENST00000285116 RAX2Q96IS3 184 aa7.75□□□□□ -1.17
SKA1-201ENST00000285116 AMELXQ99217 191 aa7.75□□□□□ -1.17
SKA1-201ENST00000285116 CCDC179H3BU77 68 aa7.75□□□□□ -1.17
SKA1-201ENST00000285116 J3QQQ9 107 aa7.75□□□□□ -1.17
SKA1-201ENST00000285116 LGALS9O00182 355 aa7.75□□□□□ -1.17
SKA1-201ENST00000285116 RPL13AP40429 203 aaKnown RBP7.75□□□□□ -1.17
SKA1-201ENST00000285116 CFHR3Q02985 330 aa7.75□□□□□ -1.17
SKA1-201ENST00000285116 ATXN8Q156A1 80 aa7.75□□□□□ -1.17
SKA1-201ENST00000285116 NTN5Q8WTR8 489 aaPredicted RBP7.75□□□□□ -1.17
SKA1-201ENST00000285116 TMEM263Q8WUH6 116 aaKnown RBP7.75□□□□□ -1.17
SKA1-201ENST00000285116 HIVEP1P15822 2718 aa7.74□□□□□ -1.17
SKA1-201ENST00000285116 CRLF1O75462 422 aa7.74□□□□□ -1.17
SKA1-201ENST00000285116 TRBV12-3P01733 135 aa7.74□□□□□ -1.17
SKA1-201ENST00000285116 RNF152Q8N8N0 203 aa7.74□□□□□ -1.17
SKA1-201ENST00000285116 TRAV8-4A0A0B4J246 113 aa7.74□□□□□ -1.17
SKA1-201ENST00000285116 TRBV27A0A0K0K1C4 114 aa7.74□□□□□ -1.17
SKA1-201ENST00000285116 VCYO14598 125 aa7.74□□□□□ -1.17
SKA1-201ENST00000285116 RNASE4P34096 147 aaKnown RBP7.74□□□□□ -1.17
SKA1-201ENST00000285116 HIST2H2BDQ6DRA6 164 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms