RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 C15orf56Q8N910 161 aa1.79□□□□□ -2.12
CHD1-201ENST00000284049 C4orf3Q8WVX3 66 aa1.79□□□□□ -2.12
CHD1-201ENST00000284049 TLN1Q9Y490 2541 aaKnown RBP1.79□□□□□ -2.12
CHD1-201ENST00000284049 MDKP21741 143 aaPredicted RBP1.79□□□□□ -2.12
CHD1-201ENST00000284049 GNG11P61952 73 aa1.79□□□□□ -2.12
CHD1-201ENST00000284049 Q8N9L7 120 aa1.79□□□□□ -2.12
CHD1-201ENST00000284049 PKD1L2Q7Z442 2459 aa1.79□□□□□ -2.12
CHD1-201ENST00000284049 ZNF462Q96JM2 2506 aa1.79□□□□□ -2.12
CHD1-201ENST00000284049 KRTAP29-1A8MX34 341 aaPredicted RBP1.79□□□□□ -2.12
CHD1-201ENST00000284049 LY6LH3BQJ8 138 aa1.79□□□□□ -2.12
CHD1-201ENST00000284049 SPINK8P0C7L1 97 aa1.79□□□□□ -2.12
CHD1-201ENST00000284049 FOXA1P55317 472 aa1.79□□□□□ -2.12
CHD1-201ENST00000284049 DCDP81605 110 aaKnown RBP1.79□□□□□ -2.12
CHD1-201ENST00000284049 DYNAPQ8N1N2 210 aa1.79□□□□□ -2.12
CHD1-201ENST00000284049 ST20-AS1Q8NBB2 130 aa1.79□□□□□ -2.12
CHD1-201ENST00000284049 Q96M85 177 aa1.79□□□□□ -2.12
CHD1-201ENST00000284049 SDF2Q99470 211 aa1.79□□□□□ -2.12
CHD1-201ENST00000284049 CACNA1CQ13936 2221 aa1.79□□□□□ -2.12
CHD1-201ENST00000284049 GEMIN2O14893 280 aaKnown RBP1.79□□□□□ -2.12
CHD1-201ENST00000284049 CHCHD2Q9Y6H1 151 aaPredicted RBP1.79□□□□□ -2.12
CHD1-201ENST00000284049 GNGT2O14610 69 aa1.78□□□□□ -2.12
CHD1-201ENST00000284049 CPSF4O95639 269 aaKnown RBP1.78□□□□□ -2.12
CHD1-201ENST00000284049 SNCAP37840 140 aa1.78□□□□□ -2.12
CHD1-201ENST00000284049 OR2T2Q6IF00 324 aa1.78□□□□□ -2.12
CHD1-201ENST00000284049 UNQ5815/PRO19632Q6UWF5 114 aa1.78□□□□□ -2.12
CHD1-201ENST00000284049 ZNF443Q9Y2A4 671 aaPredicted RBP1.78□□□□□ -2.12
CHD1-201ENST00000284049 RIF1Q5UIP0 2472 aaKnown RBP1.78□□□□□ -2.12
CHD1-201ENST00000284049 IGLV2-18A0A075B6J9 118 aa1.78□□□□□ -2.12
CHD1-201ENST00000284049 CBLN1P23435 193 aa1.78□□□□□ -2.12
CHD1-201ENST00000284049 ABCA2Q9BZC7 2435 aa1.78□□□□□ -2.12
CHD1-201ENST00000284049 KRTAP25-1Q3LHN0 102 aa1.78□□□□□ -2.12
CHD1-201ENST00000284049 ATP6V0E2Q8NHE4 81 aa1.78□□□□□ -2.12
CHD1-201ENST00000284049 TMEM91Q6ZNR0 172 aa1.78□□□□□ -2.12
CHD1-201ENST00000284049 ATP11AUNQ6ZP68 121 aa1.78□□□□□ -2.12
CHD1-201ENST00000284049 SPTSSBQ8NFR3 76 aa1.78□□□□□ -2.12
CHD1-201ENST00000284049 TP73-AS1Q9UF72 201 aa1.78□□□□□ -2.12
CHD1-201ENST00000284049 SCN3AQ9NY46 2000 aa1.78□□□□□ -2.13
CHD1-201ENST00000284049 IGKV1OR2-108A0A075B7D4 117 aa1.78□□□□□ -2.13
CHD1-201ENST00000284049 PRB4P10163 310 aaPredicted RBP1.78□□□□□ -2.13
CHD1-201ENST00000284049 TMEM136Q6ZRR5 245 aa1.78□□□□□ -2.13
CHD1-201ENST00000284049 MAPK1IP1LQ8NDC0 245 aa1.78□□□□□ -2.13
CHD1-201ENST00000284049 C17orf98A8MV24 154 aa1.77□□□□□ -2.13
CHD1-201ENST00000284049 H3BRM9 83 aa1.77□□□□□ -2.13
CHD1-201ENST00000284049 NPC2P61916 151 aa1.77□□□□□ -2.13
CHD1-201ENST00000284049 IGSF10Q6WRI0 2623 aa1.77□□□□□ -2.13
CHD1-201ENST00000284049 LINC00612Q8N6U2 182 aa1.77□□□□□ -2.13
CHD1-201ENST00000284049 SPANXA2-OT1Q8N9U9 137 aa1.77□□□□□ -2.13
CHD1-201ENST00000284049 MED13LQ71F56 2210 aa1.77□□□□□ -2.13
CHD1-201ENST00000284049 ZGRF1Q86YA3 2104 aa1.77□□□□□ -2.13
CHD1-201ENST00000284049 PTPRQQ9UMZ3 2332 aa1.77□□□□□ -2.13
CHD1-201ENST00000284049 TMSB15BA0A087X1C1 80 aa1.77□□□□□ -2.13
CHD1-201ENST00000284049 CLPSP04118 112 aa1.77□□□□□ -2.13
CHD1-201ENST00000284049 RNASE4P34096 147 aaKnown RBP1.77□□□□□ -2.13
CHD1-201ENST00000284049 Q6ZUT4 128 aa1.77□□□□□ -2.13
CHD1-201ENST00000284049 NABP2Q9BQ15 211 aa1.77□□□□□ -2.13
CHD1-201ENST00000284049 CHD6Q8TD26 2715 aa1.77□□□□□ -2.13
CHD1-201ENST00000284049 GAS8-AS1O95177 125 aa1.77□□□□□ -2.13
CHD1-201ENST00000284049 ADM2Q7Z4H4 148 aa1.77□□□□□ -2.13
CHD1-201ENST00000284049 MYOZ3Q8TDC0 251 aa1.77□□□□□ -2.13
CHD1-201ENST00000284049 SERP1Q9Y6X1 66 aa1.77□□□□□ -2.13
CHD1-201ENST00000284049 S4R3C0 116 aa1.77□□□□□ -2.13
CHD1-201ENST00000284049 SPTBN4Q9H254 2564 aa1.77□□□□□ -2.13
CHD1-201ENST00000284049 NCKAP5O14513 1909 aa1.77□□□□□ -2.13
CHD1-201ENST00000284049 IGKV1-9A0A0C4DH69 117 aa1.77□□□□□ -2.13
CHD1-201ENST00000284049 CCL16O15467 120 aa1.77□□□□□ -2.13
CHD1-201ENST00000284049 S100ZQ8WXG8 99 aa1.77□□□□□ -2.13
CHD1-201ENST00000284049 AGPAT4-IT1Q9H0P7 198 aa1.77□□□□□ -2.13
CHD1-201ENST00000284049 CYTL1Q9NRR1 136 aa1.77□□□□□ -2.13
CHD1-201ENST00000284049 PRUNE2Q8WUY3 3088 aa1.77□□□□□ -2.13
CHD1-201ENST00000284049 MRPS14O60783 128 aaKnown RBP1.77□□□□□ -2.13
CHD1-201ENST00000284049 ZNF737O75373 536 aa1.77□□□□□ -2.13
CHD1-201ENST00000284049 KRTAP10-2P60368 255 aa1.77□□□□□ -2.13
CHD1-201ENST00000284049 NNATQ16517 81 aa1.77□□□□□ -2.13
CHD1-201ENST00000284049 ARPINQ7Z6K5 226 aa1.77□□□□□ -2.13
CHD1-201ENST00000284049 MUC7Q8TAX7 377 aa1.77□□□□□ -2.13
CHD1-201ENST00000284049 C10orf82Q8WW14 230 aa1.77□□□□□ -2.13
CHD1-201ENST00000284049 MGST2Q99735 147 aa1.77□□□□□ -2.13
CHD1-201ENST00000284049 WDR87Q6ZQQ6 2873 aa1.76□□□□□ -2.13
CHD1-201ENST00000284049 EML6Q6ZMW3 1958 aa1.76□□□□□ -2.13
CHD1-201ENST00000284049 A8MUU9 505 aa1.76□□□□□ -2.13
CHD1-201ENST00000284049 CCDC179H3BU77 68 aa1.76□□□□□ -2.13
CHD1-201ENST00000284049 IFITM1P13164 125 aa1.76□□□□□ -2.13
CHD1-201ENST00000284049 MT3P25713 68 aa1.76□□□□□ -2.13
CHD1-201ENST00000284049 PSMG4Q5JS54 123 aa1.76□□□□□ -2.13
CHD1-201ENST00000284049 LINC00311Q8N616 119 aa1.76□□□□□ -2.13
CHD1-201ENST00000284049 VSTM2AQ8TAG5 236 aa1.76□□□□□ -2.13
CHD1-201ENST00000284049 LSM2Q9Y333 95 aaKnown RBP1.76□□□□□ -2.13
CHD1-201ENST00000284049 PDCD5O14737 125 aa1.76□□□□□ -2.13
CHD1-201ENST00000284049 ADIRFQ15847 76 aa1.76□□□□□ -2.13
CHD1-201ENST00000284049 DPH3Q96FX2 82 aa1.76□□□□□ -2.13
CHD1-201ENST00000284049 SMCO4Q9NRQ5 59 aa1.76□□□□□ -2.13
CHD1-201ENST00000284049 IGKV1D-42A0A075B6H8 117 aa1.76□□□□□ -2.13
CHD1-201ENST00000284049 C9orf106Q8NAJ2 232 aa1.76□□□□□ -2.13
CHD1-201ENST00000284049 UQCR10Q9UDW1 63 aa1.76□□□□□ -2.13
CHD1-201ENST00000284049 TRIOO75962 3097 aa1.76□□□□□ -2.13
CHD1-201ENST00000284049 DNAH10OSP0CZ25 163 aa1.76□□□□□ -2.13
CHD1-201ENST00000284049 KRTDAPP60985 99 aa1.76□□□□□ -2.13
CHD1-201ENST00000284049 DNAJC15Q9Y5T4 150 aa1.76□□□□□ -2.13
CHD1-201ENST00000284049 A0A1W2PNU3 283 aaPredicted RBP1.76□□□□□ -2.13
CHD1-201ENST00000284049 E7EQL1 145 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms