RNA–Protein interactions for RNA: ENST00000265038.9

ERCC8-201, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC8, Length 2,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-201ENST00000265038 Q8N3U1 123 aa5.69□□□□□ -1.5
ERCC8-201ENST00000265038 OSTCQ9NRP0 149 aa5.69□□□□□ -1.5
ERCC8-201ENST00000265038 M0QY20 66 aa5.69□□□□□ -1.5
ERCC8-201ENST00000265038 IGHV3-30P01768 117 aa5.69□□□□□ -1.5
ERCC8-201ENST00000265038 IGHV3-33P01772 117 aa5.69□□□□□ -1.5
ERCC8-201ENST00000265038 MGPP08493 103 aa5.69□□□□□ -1.5
ERCC8-201ENST00000265038 TRGC1P0CF51 173 aa5.69□□□□□ -1.5
ERCC8-201ENST00000265038 IGHV3-30-3P0DP02 117 aa5.69□□□□□ -1.5
ERCC8-201ENST00000265038 IGHV3-30-5P0DP03 117 aa5.69□□□□□ -1.5
ERCC8-201ENST00000265038 IFITM2Q01629 132 aa5.69□□□□□ -1.5
ERCC8-201ENST00000265038 SUMO4Q6EEV6 95 aa5.69□□□□□ -1.5
ERCC8-201ENST00000265038 ISOC2Q96AB3 205 aa5.69□□□□□ -1.5
ERCC8-201ENST00000265038 PGLYRP4Q96LB8 373 aa5.69□□□□□ -1.5
ERCC8-201ENST00000265038 A0A087WWC5 75 aa5.68□□□□□ -1.5
ERCC8-201ENST00000265038 TSKUQ8WUA8 353 aa5.68□□□□□ -1.5
ERCC8-201ENST00000265038 DPH3P1Q9H4G8 78 aa5.68□□□□□ -1.5
ERCC8-201ENST00000265038 NAT8Q9UHE5 227 aa5.68□□□□□ -1.5
ERCC8-201ENST00000265038 V9GYV3 84 aa5.68□□□□□ -1.5
ERCC8-201ENST00000265038 IBA57-AS1B1ANH7 110 aa5.67□□□□□ -1.5
ERCC8-201ENST00000265038 RAB14P61106 215 aa5.67□□□□□ -1.5
ERCC8-201ENST00000265038 C10orf126Q8N4M7 172 aa5.67□□□□□ -1.5
ERCC8-201ENST00000265038 SMCPP49901 116 aaPredicted RBP5.67□□□□□ -1.5
ERCC8-201ENST00000265038 NFE4Q86UQ8 179 aa5.67□□□□□ -1.5
ERCC8-201ENST00000265038 GFRA4Q9GZZ7 299 aa5.67□□□□□ -1.5
ERCC8-201ENST00000265038 TRBV6-8A0A0A6YYG3 113 aa5.66□□□□□ -1.5
ERCC8-201ENST00000265038 FAM231BA6NCW3 169 aa5.66□□□□□ -1.5
ERCC8-201ENST00000265038 HIGD1CA8MV81 97 aa5.66□□□□□ -1.5
ERCC8-201ENST00000265038 ADIRFQ15847 76 aa5.66□□□□□ -1.5
ERCC8-201ENST00000265038 CLLU1Q5K131 121 aa5.66□□□□□ -1.5
ERCC8-201ENST00000265038 NTM-AS1Q6ZSK4 140 aa5.66□□□□□ -1.5
ERCC8-201ENST00000265038 NIT1Q86X76 327 aa5.66□□□□□ -1.5
ERCC8-201ENST00000265038 C15orf54Q8N8G6 183 aa5.66□□□□□ -1.5
ERCC8-201ENST00000265038 DNAJC30Q96LL9 226 aa5.66□□□□□ -1.5
ERCC8-201ENST00000265038 H7C1H1 209 aa5.65□□□□□ -1.5
ERCC8-201ENST00000265038 RASL11AQ6T310 242 aa5.65□□□□□ -1.5
ERCC8-201ENST00000265038 DAZ4Q86SG3 579 aaKnown RBP5.65□□□□□ -1.5
ERCC8-201ENST00000265038 GATD1Q8NB37 220 aa5.65□□□□□ -1.5
ERCC8-201ENST00000265038 DAZ3Q9NR90 486 aaKnown RBP5.65□□□□□ -1.5
ERCC8-201ENST00000265038 HECTD4Q9Y4D8 3996 aa5.65□□□□□ -1.51
ERCC8-201ENST00000265038 DYNC1H1Q14204 4646 aaKnown RBP5.65□□□□□ -1.51
ERCC8-201ENST00000265038 TRAV26-2A0A0B4J265 109 aa5.65□□□□□ -1.51
ERCC8-201ENST00000265038 NUP35Q8NFH5 326 aa5.65□□□□□ -1.51
ERCC8-201ENST00000265038 NIT2Q9NQR4 276 aa5.65□□□□□ -1.51
ERCC8-201ENST00000265038 A0A1B0GUT8 65 aa5.64□□□□□ -1.51
ERCC8-201ENST00000265038 KRTAP10-2P60368 255 aa5.64□□□□□ -1.51
ERCC8-201ENST00000265038 SMIM15Q7Z3B0 74 aa5.64□□□□□ -1.51
ERCC8-201ENST00000265038 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.64□□□□□ -1.51
ERCC8-201ENST00000265038 Q9HAA7 133 aa5.64□□□□□ -1.51
ERCC8-201ENST00000265038 TMA7Q9Y2S6 64 aaKnown RBP5.64□□□□□ -1.51
ERCC8-201ENST00000265038 DNAH11Q96DT5 4516 aa5.64□□□□□ -1.51
ERCC8-201ENST00000265038 SMIM27A0A1W2PRY6 76 aa5.64□□□□□ -1.51
ERCC8-201ENST00000265038 SPATA12Q7Z6I5 190 aa5.64□□□□□ -1.51
ERCC8-201ENST00000265038 BORCS7Q96B45 105 aa5.64□□□□□ -1.51
ERCC8-201ENST00000265038 A0A087WTM6 91 aa5.63□□□□□ -1.51
ERCC8-201ENST00000265038 LAGE3Q14657 143 aa5.63□□□□□ -1.51
ERCC8-201ENST00000265038 TMEM97Q5BJF2 176 aa5.63□□□□□ -1.51
ERCC8-201ENST00000265038 DEFB104AQ8WTQ1 72 aa5.63□□□□□ -1.51
ERCC8-201ENST00000265038 RPL39LQ96EH5 51 aaKnown RBP5.63□□□□□ -1.51
ERCC8-201ENST00000265038 RNF185Q96GF1 192 aa5.63□□□□□ -1.51
ERCC8-201ENST00000265038 CHCHD7Q9BUK0 85 aa5.63□□□□□ -1.51
ERCC8-201ENST00000265038 TMEM191AQ9H0A3 160 aa5.63□□□□□ -1.51
ERCC8-201ENST00000265038 NAT8BQ9UHF3 227 aa5.63□□□□□ -1.51
ERCC8-201ENST00000265038 TMEM262E9PQX1 116 aa5.62□□□□□ -1.51
ERCC8-201ENST00000265038 GAS8-AS1O95177 125 aa5.62□□□□□ -1.51
ERCC8-201ENST00000265038 IQCJQ1A5X6 159 aa5.62□□□□□ -1.51
ERCC8-201ENST00000265038 FRZBQ92765 325 aa5.62□□□□□ -1.51
ERCC8-201ENST00000265038 CHCHD5Q9BSY4 110 aa5.62□□□□□ -1.51
ERCC8-201ENST00000265038 KLK12Q9UKR0 248 aa5.62□□□□□ -1.51
ERCC8-201ENST00000265038 URGCP-MRPS24S4R325 110 aa5.62□□□□□ -1.51
ERCC8-201ENST00000265038 PKD1P98161 4303 aa5.62□□□□□ -1.51
ERCC8-201ENST00000265038 A0A087WX48 190 aa5.62□□□□□ -1.51
ERCC8-201ENST00000265038 LRCOL1A6NCL2 159 aa5.62□□□□□ -1.51
ERCC8-201ENST00000265038 RAB4AP20338 218 aa5.62□□□□□ -1.51
ERCC8-201ENST00000265038 RIGQ13278 110 aa5.62□□□□□ -1.51
ERCC8-201ENST00000265038 MPV17L2Q567V2 206 aa5.62□□□□□ -1.51
ERCC8-201ENST00000265038 ANAPC16Q96DE5 110 aa5.62□□□□□ -1.51
ERCC8-201ENST00000265038 TRBV25-1A0A075B6N4 114 aa5.61□□□□□ -1.51
ERCC8-201ENST00000265038 TRAV8-3A0A0A6YYJ7 113 aa5.61□□□□□ -1.51
ERCC8-201ENST00000265038 IGHV1-24A0A0C4DH33 117 aa5.61□□□□□ -1.51
ERCC8-201ENST00000265038 C16orf90A8MZG2 172 aa5.61□□□□□ -1.51
ERCC8-201ENST00000265038 FUSP35637 526 aaKnown RBP eCLIP5.61□□□□□ -1.51
ERCC8-201ENST00000265038 GAGE6Q13070 117 aa5.61□□□□□ -1.51
ERCC8-201ENST00000265038 ATRAIDQ6UW56 229 aa5.61□□□□□ -1.51
ERCC8-201ENST00000265038 AMN1Q8IY45 258 aa5.61□□□□□ -1.51
ERCC8-201ENST00000265038 PSCAO43653 123 aa5.6□□□□□ -1.51
ERCC8-201ENST00000265038 ELOBQ15370 118 aa5.6□□□□□ -1.51
ERCC8-201ENST00000265038 KCNIP4Q6PIL6 250 aa5.6□□□□□ -1.51
ERCC8-201ENST00000265038 ENHOQ6UWT2 76 aa5.6□□□□□ -1.51
ERCC8-201ENST00000265038 MAPKAPK5-AS1Q8N8E1 139 aa5.6□□□□□ -1.51
ERCC8-201ENST00000265038 Q8N976 141 aa5.6□□□□□ -1.51
ERCC8-201ENST00000265038 UBE2WQ96B02 151 aa5.6□□□□□ -1.51
ERCC8-201ENST00000265038 TRBV6-5A0A0K0K1A5 114 aa5.6□□□□□ -1.51
ERCC8-201ENST00000265038 RBX1P62877 108 aa5.6□□□□□ -1.51
ERCC8-201ENST00000265038 PNRC1Q12796 327 aaPredicted RBP5.6□□□□□ -1.51
ERCC8-201ENST00000265038 COTL1Q14019 142 aa5.6□□□□□ -1.51
ERCC8-201ENST00000265038 UQCC3Q6UW78 93 aa5.6□□□□□ -1.51
ERCC8-201ENST00000265038 TM2D2Q9BX73 214 aa5.6□□□□□ -1.51
ERCC8-201ENST00000265038 PKHD1P08F94 4074 aa5.6□□□□□ -1.51
ERCC8-201ENST00000265038 SDHAF1A6NFY7 115 aa5.59□□□□□ -1.51
ERCC8-201ENST00000265038 SMKR1H3BMG3 65 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms