RNA–Protein interactions for RNA: ENST00000264638.8

CNTNAP1-201, Transcript of contactin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTNAP1, Length 5,276 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1-201ENST00000264638 FSTL3O95633 263 aa10.24□□□□□ -0.77
CNTNAP1-201ENST00000264638 CXCL5P42830 114 aa10.24□□□□□ -0.77
CNTNAP1-201ENST00000264638 APRG1Q8IVJ8 170 aa10.24□□□□□ -0.77
CNTNAP1-201ENST00000264638 ODF3L1Q8IXM7 274 aa10.24□□□□□ -0.77
CNTNAP1-201ENST00000264638 WI2-2373I1.2A0A1W2PRP0 233 aa10.24□□□□□ -0.77
CNTNAP1-201ENST00000264638 A6NDX4 124 aa10.24□□□□□ -0.77
CNTNAP1-201ENST00000264638 K7EQD1 137 aa10.23□□□□□ -0.77
CNTNAP1-201ENST00000264638 LMO4P61968 165 aa10.23□□□□□ -0.77
CNTNAP1-201ENST00000264638 PATE2Q6UY27 113 aa10.23□□□□□ -0.77
CNTNAP1-201ENST00000264638 FAM236DA0A1B0GTK5 79 aa10.23□□□□□ -0.77
CNTNAP1-201ENST00000264638 FAM240AA0A1B0GVK7 77 aa10.23□□□□□ -0.77
CNTNAP1-201ENST00000264638 FAM236CP0DP71 79 aa10.23□□□□□ -0.77
CNTNAP1-201ENST00000264638 PTH2Q96A98 100 aa10.23□□□□□ -0.77
CNTNAP1-201ENST00000264638 FAM167A-AS1Q96KT0 104 aa10.23□□□□□ -0.77
CNTNAP1-201ENST00000264638 CSPG4Q6UVK1 2322 aa10.23□□□□□ -0.77
CNTNAP1-201ENST00000264638 NCKAP5O14513 1909 aa10.23□□□□□ -0.77
CNTNAP1-201ENST00000264638 C4orf3Q8WVX3 66 aa10.23□□□□□ -0.77
CNTNAP1-201ENST00000264638 CAMK2N2Q96S95 79 aa10.23□□□□□ -0.77
CNTNAP1-201ENST00000264638 IGHV4-4A0A075B6R2 117 aa10.22□□□□□ -0.77
CNTNAP1-201ENST00000264638 IGHV1-58A0A0C4DH39 117 aa10.22□□□□□ -0.77
CNTNAP1-201ENST00000264638 TCL1BO95988 128 aa10.22□□□□□ -0.77
CNTNAP1-201ENST00000264638 TRBV12-3P01733 135 aa10.22□□□□□ -0.77
CNTNAP1-201ENST00000264638 PRB2P02812 416 aaPredicted RBP10.22□□□□□ -0.77
CNTNAP1-201ENST00000264638 FREM1Q5H8C1 2179 aa10.22□□□□□ -0.77
CNTNAP1-201ENST00000264638 A0A096LPF7 62 aa10.22□□□□□ -0.77
CNTNAP1-201ENST00000264638 INSL3P51460 131 aa10.22□□□□□ -0.77
CNTNAP1-201ENST00000264638 ATP5EP2Q5VTU8 51 aa10.22□□□□□ -0.77
CNTNAP1-201ENST00000264638 COL4A3Q01955 1670 aa10.22□□□□□ -0.77
CNTNAP1-201ENST00000264638 IGKV2D-24A0A075B6R9 120 aa10.22□□□□□ -0.77
CNTNAP1-201ENST00000264638 MT-ATP8P03928 68 aa10.22□□□□□ -0.77
CNTNAP1-201ENST00000264638 C3orf22Q8N5N4 141 aa10.22□□□□□ -0.77
CNTNAP1-201ENST00000264638 LINC00574Q9H8X3 128 aa10.22□□□□□ -0.77
CNTNAP1-201ENST00000264638 MRPL36Q9P0J6 103 aaKnown RBP10.21□□□□□ -0.77
CNTNAP1-201ENST00000264638 CGB3P0DN86 165 aa10.21□□□□□ -0.77
CNTNAP1-201ENST00000264638 V9GYY9 64 aa10.21□□□□□ -0.77
CNTNAP1-201ENST00000264638 A0A0J9YY99 117 aa10.21□□□□□ -0.78
CNTNAP1-201ENST00000264638 SPANXB1Q9NS25 103 aaPredicted RBP10.21□□□□□ -0.78
CNTNAP1-201ENST00000264638 NDUFC2-KCTD14E9PQ53 114 aa10.2□□□□□ -0.78
CNTNAP1-201ENST00000264638 IGKV1OR2-108A0A075B7D4 117 aa10.2□□□□□ -0.78
CNTNAP1-201ENST00000264638 TMEM131Q92545 1883 aa10.2□□□□□ -0.78
CNTNAP1-201ENST00000264638 RPL39P62891 51 aaKnown RBP10.2□□□□□ -0.78
CNTNAP1-201ENST00000264638 OBSL1O75147 1896 aa10.2□□□□□ -0.78
CNTNAP1-201ENST00000264638 C9orf47Q6ZRZ4 202 aa10.2□□□□□ -0.78
CNTNAP1-201ENST00000264638 DIRC1Q969H9 104 aa10.2□□□□□ -0.78
CNTNAP1-201ENST00000264638 Q6ZQT7 251 aa10.2□□□□□ -0.78
CNTNAP1-201ENST00000264638 DAND5Q8N907 189 aa10.2□□□□□ -0.78
CNTNAP1-201ENST00000264638 UPK3BQ9BT76 320 aa10.2□□□□□ -0.78
CNTNAP1-201ENST00000264638 C19orf84I3L1E1 186 aa10.19□□□□□ -0.78
CNTNAP1-201ENST00000264638 CGB7P0DN87 165 aa10.19□□□□□ -0.78
CNTNAP1-201ENST00000264638 MIAQ16674 131 aa10.19□□□□□ -0.78
CNTNAP1-201ENST00000264638 PTPN13Q12923 2485 aa10.19□□□□□ -0.78
CNTNAP1-201ENST00000264638 ODF3BA8MYP8 253 aa10.19□□□□□ -0.78
CNTNAP1-201ENST00000264638 IGLV2-14P01704 120 aa10.18□□□□□ -0.78
CNTNAP1-201ENST00000264638 SEC61GP60059 68 aa10.18□□□□□ -0.78
CNTNAP1-201ENST00000264638 C19orf71A6NCJ1 209 aa10.18□□□□□ -0.78
CNTNAP1-201ENST00000264638 C20orf197Q8N268 126 aa10.18□□□□□ -0.78
CNTNAP1-201ENST00000264638 SPTSSBQ8NFR3 76 aa10.18□□□□□ -0.78
CNTNAP1-201ENST00000264638 ZNF503Q96F45 646 aa10.18□□□□□ -0.78
CNTNAP1-201ENST00000264638 CCL18P55774 89 aa10.18□□□□□ -0.78
CNTNAP1-201ENST00000264638 NDUFA1O15239 70 aa10.18□□□□□ -0.78
CNTNAP1-201ENST00000264638 IGLC6P0CF74 106 aa10.18□□□□□ -0.78
CNTNAP1-201ENST00000264638 RPL18AQ02543 176 aaKnown RBP10.18□□□□□ -0.78
CNTNAP1-201ENST00000264638 TM2D2Q9BX73 214 aa10.18□□□□□ -0.78
CNTNAP1-201ENST00000264638 TRAV23DV6A0A075B6W5 121 aa10.17□□□□□ -0.78
CNTNAP1-201ENST00000264638 ATP5EP56381 51 aaPredicted RBP10.17□□□□□ -0.78
CNTNAP1-201ENST00000264638 CHD3Q12873 2000 aaKnown RBP10.17□□□□□ -0.78
CNTNAP1-201ENST00000264638 DNAJC9-AS1A6NH13 148 aa10.17□□□□□ -0.78
CNTNAP1-201ENST00000264638 SPRY2O43597 315 aa10.17□□□□□ -0.78
CNTNAP1-201ENST00000264638 A0A1B0GXF2 115 aa10.17□□□□□ -0.78
CNTNAP1-201ENST00000264638 FANCD2OSQ96PS1 177 aa10.17□□□□□ -0.78
CNTNAP1-201ENST00000264638 GYPEP15421 78 aa10.16□□□□□ -0.78
CNTNAP1-201ENST00000264638 TIRAPP58753 221 aa10.16□□□□□ -0.78
CNTNAP1-201ENST00000264638 TRBV7-3A0A075B6L6 115 aa10.16□□□□□ -0.78
CNTNAP1-201ENST00000264638 MIR7-3HGQ8N6C7 128 aa10.16□□□□□ -0.78
CNTNAP1-201ENST00000264638 IGHV3-30-3P0DP02 117 aa10.16□□□□□ -0.78
CNTNAP1-201ENST00000264638 C20orf203Q8NBC4 194 aa10.16□□□□□ -0.78
CNTNAP1-201ENST00000264638 COL4A4P53420 1690 aaPredicted RBP10.16□□□□□ -0.78
CNTNAP1-201ENST00000264638 SONP18583 2426 aaKnown RBP10.16□□□□□ -0.78
CNTNAP1-201ENST00000264638 ATRXP46100 2492 aa10.16□□□□□ -0.78
CNTNAP1-201ENST00000264638 HIST2H2BDQ6DRA6 164 aa10.16□□□□□ -0.78
CNTNAP1-201ENST00000264638 NCOA6Q14686 2063 aaPredicted RBP10.16□□□□□ -0.78
CNTNAP1-201ENST00000264638 ZNF106Q9H2Y7 1883 aaKnown RBP10.15□□□□□ -0.78
CNTNAP1-201ENST00000264638 SMAD5-AS1Q9Y6J3 95 aa10.15□□□□□ -0.78
CNTNAP1-201ENST00000264638 NCR3O14931 201 aa10.15□□□□□ -0.78
CNTNAP1-201ENST00000264638 E7EUB6 86 aa10.15□□□□□ -0.79
CNTNAP1-201ENST00000264638 IGHV4-31P0DP07 118 aa10.14□□□□□ -0.79
CNTNAP1-201ENST00000264638 C11orf1Q9H5F2 150 aa10.14□□□□□ -0.79
CNTNAP1-201ENST00000264638 MDFICQ9P1T7 246 aa10.14□□□□□ -0.79
CNTNAP1-201ENST00000264638 BPY2O14599 106 aa10.14□□□□□ -0.79
CNTNAP1-201ENST00000264638 ZNF843Q8N446 348 aa10.14□□□□□ -0.79
CNTNAP1-201ENST00000264638 FAM110AQ9BQ89 295 aa10.14□□□□□ -0.79
CNTNAP1-201ENST00000264638 Q6YL49 198 aa10.13□□□□□ -0.79
CNTNAP1-201ENST00000264638 NFE4Q86UQ8 179 aa10.13□□□□□ -0.79
CNTNAP1-201ENST00000264638 IMUPQ9GZP8 106 aa10.13□□□□□ -0.79
CNTNAP1-201ENST00000264638 NDUFC1O43677 76 aa10.13□□□□□ -0.79
CNTNAP1-201ENST00000264638 FRMD6-AS1P0C7T7 363 aa10.13□□□□□ -0.79
CNTNAP1-201ENST00000264638 Q9HAA7 133 aa10.13□□□□□ -0.79
CNTNAP1-201ENST00000264638 PCDH15Q96QU1 1955 aa10.13□□□□□ -0.79
CNTNAP1-201ENST00000264638 KMT2EQ8IZD2 1858 aa10.13□□□□□ -0.79
CNTNAP1-201ENST00000264638 TNRC6AQ8NDV7 1962 aaKnown RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms