RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 A0A0J9YXV3 536 aa9.72□□□□□ -0.85
SNX1-201ENST00000261889 RBAKDNA6NC62 111 aa9.72□□□□□ -0.85
SNX1-201ENST00000261889 PSMG4Q5JS54 123 aa9.72□□□□□ -0.85
SNX1-201ENST00000261889 SPATA25Q9BR10 227 aa9.72□□□□□ -0.85
SNX1-201ENST00000261889 LINC01546A6NGU7 62 aa9.71□□□□□ -0.85
SNX1-201ENST00000261889 FAM159AQ6UWV7 190 aa9.71□□□□□ -0.85
SNX1-201ENST00000261889 C19orf84I3L1E1 186 aa9.71□□□□□ -0.86
SNX1-201ENST00000261889 COX6B1P14854 86 aa9.71□□□□□ -0.86
SNX1-201ENST00000261889 Q6ZUT4 128 aa9.71□□□□□ -0.86
SNX1-201ENST00000261889 PIFOQ8TCI5 191 aa9.71□□□□□ -0.86
SNX1-201ENST00000261889 IGHV3-38A0A0C4DH36 116 aa9.7□□□□□ -0.86
SNX1-201ENST00000261889 C11orf71Q6IPW1 123 aa9.7□□□□□ -0.86
SNX1-201ENST00000261889 MRAP2Q96G30 205 aa9.7□□□□□ -0.86
SNX1-201ENST00000261889 ZNF625Q96I27 306 aaPredicted RBP9.7□□□□□ -0.86
SNX1-201ENST00000261889 LGALS3P17931 250 aaKnown RBP9.69□□□□□ -0.86
SNX1-201ENST00000261889 MINOS1Q5TGZ0 78 aa9.69□□□□□ -0.86
SNX1-201ENST00000261889 CRLF1O75462 422 aa9.69□□□□□ -0.86
SNX1-201ENST00000261889 UBE2E1P51965 193 aa9.69□□□□□ -0.86
SNX1-201ENST00000261889 TEX49A0A1B0GTD5 131 aa9.68□□□□□ -0.86
SNX1-201ENST00000261889 J3QQQ9 107 aa9.68□□□□□ -0.86
SNX1-201ENST00000261889 MUSTN1Q8IVN3 82 aa9.68□□□□□ -0.86
SNX1-201ENST00000261889 TENM4Q6N022 2769 aa9.68□□□□□ -0.86
SNX1-201ENST00000261889 LINC00315P59091 139 aa9.68□□□□□ -0.86
SNX1-201ENST00000261889 EBI3Q14213 229 aa9.68□□□□□ -0.86
SNX1-201ENST00000261889 C9orf139Q6ZV77 190 aa9.68□□□□□ -0.86
SNX1-201ENST00000261889 NTN5Q8WTR8 489 aaPredicted RBP9.68□□□□□ -0.86
SNX1-201ENST00000261889 TRBV7-1A0A0A6YYK4 115 aa9.67□□□□□ -0.86
SNX1-201ENST00000261889 TRAV12-1A0A0B4J245 112 aa9.67□□□□□ -0.86
SNX1-201ENST00000261889 UBE2D1P51668 147 aa9.67□□□□□ -0.86
SNX1-201ENST00000261889 LMO4P61968 165 aa9.67□□□□□ -0.86
SNX1-201ENST00000261889 MINOS1-NBL1R4GNA1 71 aa9.67□□□□□ -0.86
SNX1-201ENST00000261889 ZNF462Q96JM2 2506 aa9.67□□□□□ -0.86
SNX1-201ENST00000261889 IGHV3-16A0A0C4DH30 117 aa9.67□□□□□ -0.86
SNX1-201ENST00000261889 IGHV3-30P01768 117 aa9.67□□□□□ -0.86
SNX1-201ENST00000261889 IGHV3-30-5P0DP03 117 aa9.67□□□□□ -0.86
SNX1-201ENST00000261889 PMVKQ15126 192 aa9.67□□□□□ -0.86
SNX1-201ENST00000261889 Q8N1Y9 231 aa9.67□□□□□ -0.86
SNX1-201ENST00000261889 GCN1Q92616 2671 aaKnown RBP9.66□□□□□ -0.86
SNX1-201ENST00000261889 IGHV4-61A0A0C4DH41 118 aa9.66□□□□□ -0.86
SNX1-201ENST00000261889 TMEM238LA0A1B0GVL6 79 aa9.66□□□□□ -0.86
SNX1-201ENST00000261889 IGIPA6NJ69 53 aa9.66□□□□□ -0.86
SNX1-201ENST00000261889 A6NJY4 79 aa9.66□□□□□ -0.86
SNX1-201ENST00000261889 A8MWV9 139 aa9.66□□□□□ -0.86
SNX1-201ENST00000261889 TAL2Q16559 108 aa9.66□□□□□ -0.86
SNX1-201ENST00000261889 B5MCH6 92 aa9.66□□□□□ -0.86
SNX1-201ENST00000261889 PLA2G2AP14555 144 aa9.66□□□□□ -0.86
SNX1-201ENST00000261889 SRSF2Q01130 221 aaKnown RBP9.66□□□□□ -0.86
SNX1-201ENST00000261889 ZNF876PQ49A33 203 aa9.66□□□□□ -0.86
SNX1-201ENST00000261889 SLC25A20O43772 301 aa9.65□□□□□ -0.86
SNX1-201ENST00000261889 DEFB136Q30KP8 78 aa9.65□□□□□ -0.86
SNX1-201ENST00000261889 CLEC2BQ92478 149 aa9.65□□□□□ -0.86
SNX1-201ENST00000261889 NOTCH2Q04721 2471 aa9.65□□□□□ -0.86
SNX1-201ENST00000261889 TRAV4A0A0B4J268 109 aa9.65□□□□□ -0.86
SNX1-201ENST00000261889 HERVK_113P61574 105 aa9.65□□□□□ -0.86
SNX1-201ENST00000261889 PRO1854Q9UHT4 67 aa9.65□□□□□ -0.86
SNX1-201ENST00000261889 U3KQE9 123 aa9.65□□□□□ -0.86
SNX1-201ENST00000261889 NBPF19A0A087WUL8 3843 aa9.64□□□□□ -0.87
SNX1-201ENST00000261889 SOCS3O14543 225 aa9.64□□□□□ -0.87
SNX1-201ENST00000261889 TEN1Q86WV5 123 aa9.64□□□□□ -0.87
SNX1-201ENST00000261889 C10orf126Q8N4M7 172 aa9.64□□□□□ -0.87
SNX1-201ENST00000261889 ANAPC13Q9BS18 74 aa9.64□□□□□ -0.87
SNX1-201ENST00000261889 ZNF469Q96JG9 3925 aaPredicted RBP9.64□□□□□ -0.87
SNX1-201ENST00000261889 IGHV4-4A0A075B6R2 117 aa9.64□□□□□ -0.87
SNX1-201ENST00000261889 TTC32Q5I0X7 151 aa9.64□□□□□ -0.87
SNX1-201ENST00000261889 MOB4Q9Y3A3 225 aa9.64□□□□□ -0.87
SNX1-201ENST00000261889 UBE2D3P61077 147 aa9.63□□□□□ -0.87
SNX1-201ENST00000261889 UBE2D2P62837 147 aa9.63□□□□□ -0.87
SNX1-201ENST00000261889 KIF25-AS1Q9Y6Z4 181 aa9.63□□□□□ -0.87
SNX1-201ENST00000261889 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.63□□□□□ -0.87
SNX1-201ENST00000261889 IGKV2-29A2NJV5 120 aaPredicted RBP9.63□□□□□ -0.87
SNX1-201ENST00000261889 AVPP01185 164 aa9.63□□□□□ -0.87
SNX1-201ENST00000261889 SYNJ2BPP57105 145 aa9.63□□□□□ -0.87
SNX1-201ENST00000261889 TMEM190Q8WZ59 177 aa9.63□□□□□ -0.87
SNX1-201ENST00000261889 HIVEP2P31629 2446 aa9.63□□□□□ -0.87
SNX1-201ENST00000261889 SETXQ7Z333 2677 aaKnown RBP9.63□□□□□ -0.87
SNX1-201ENST00000261889 DOPEY1Q5JWR5 2465 aa9.63□□□□□ -0.87
SNX1-201ENST00000261889 ADAMTSL4-AS1Q5T5F5 129 aa9.62□□□□□ -0.87
SNX1-201ENST00000261889 PPDPFLQ8WWR9 84 aa9.62□□□□□ -0.87
SNX1-201ENST00000261889 AMELXQ99217 191 aa9.62□□□□□ -0.87
SNX1-201ENST00000261889 POLR2KP53803 58 aaKnown RBP9.62□□□□□ -0.87
SNX1-201ENST00000261889 IGHV3OR16-12A0A075B7B8 117 aa9.61□□□□□ -0.87
SNX1-201ENST00000261889 OVOL1O14753 267 aa9.61□□□□□ -0.87
SNX1-201ENST00000261889 VCYO14598 125 aa9.61□□□□□ -0.87
SNX1-201ENST00000261889 SLC25A29Q8N8R3 303 aa9.61□□□□□ -0.87
SNX1-201ENST00000261889 PRSS47A8MTI9 375 aa9.61□□□□□ -0.87
SNX1-201ENST00000261889 ERG28Q9UKR5 140 aa9.61□□□□□ -0.87
SNX1-201ENST00000261889 NDUFA7O95182 113 aa9.6□□□□□ -0.87
SNX1-201ENST00000261889 CD28P10747 220 aa9.6□□□□□ -0.87
SNX1-201ENST00000261889 ZNF22P17026 224 aaPredicted RBP9.6□□□□□ -0.87
SNX1-201ENST00000261889 C18orf65Q6ZTR6 163 aa9.6□□□□□ -0.87
SNX1-201ENST00000261889 C11orf44Q8N8P7 122 aa9.6□□□□□ -0.87
SNX1-201ENST00000261889 VCX2Q9H322 139 aa9.6□□□□□ -0.87
SNX1-201ENST00000261889 DAZ1Q9NQZ3 744 aaKnown RBP9.6□□□□□ -0.87
SNX1-201ENST00000261889 OOSP1A8MZH6 123 aa9.59□□□□□ -0.87
SNX1-201ENST00000261889 TRIAP1O43715 76 aa9.59□□□□□ -0.87
SNX1-201ENST00000261889 IGHV3-33P01772 117 aa9.59□□□□□ -0.87
SNX1-201ENST00000261889 IGHV4-59P01825 116 aa9.59□□□□□ -0.87
SNX1-201ENST00000261889 IGHV1-69DA0A0B4J2H0 117 aa9.58□□□□□ -0.88
SNX1-201ENST00000261889 CCDC179H3BU77 68 aa9.58□□□□□ -0.88
SNX1-201ENST00000261889 M0QY20 66 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 171.5 ms