RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 MED14OSP0DP75 135 aa5.42□□□□□ -1.54
CSDE1-201ENST00000261443 HERVK_113P63121 156 aa5.42□□□□□ -1.54
CSDE1-201ENST00000261443 SUMO4Q6EEV6 95 aa5.42□□□□□ -1.54
CSDE1-201ENST00000261443 LINC00477Q96M19 166 aa5.42□□□□□ -1.54
CSDE1-201ENST00000261443 TRAV8-3A0A0A6YYJ7 113 aa5.42□□□□□ -1.54
CSDE1-201ENST00000261443 A0A0J9YX75 114 aa5.42□□□□□ -1.54
CSDE1-201ENST00000261443 RNASE3P12724 160 aaKnown RBP5.42□□□□□ -1.54
CSDE1-201ENST00000261443 C20orf173Q96LM9 149 aa5.42□□□□□ -1.54
CSDE1-201ENST00000261443 ZNF580Q9UK33 172 aa5.42□□□□□ -1.54
CSDE1-201ENST00000261443 MUC4Q99102 2169 aa5.41□□□□□ -1.54
CSDE1-201ENST00000261443 A0A087WWL8 130 aa5.41□□□□□ -1.54
CSDE1-201ENST00000261443 LST1O00453 97 aa5.41□□□□□ -1.54
CSDE1-201ENST00000261443 LINC00315P59091 139 aa5.41□□□□□ -1.54
CSDE1-201ENST00000261443 ECSCRQ19T08 205 aa5.41□□□□□ -1.54
CSDE1-201ENST00000261443 Q6ZSV7 163 aa5.41□□□□□ -1.54
CSDE1-201ENST00000261443 JPT2Q9H910 190 aa5.41□□□□□ -1.54
CSDE1-201ENST00000261443 LINC00527Q9UJ94 153 aa5.41□□□□□ -1.54
CSDE1-201ENST00000261443 KIF25-AS1Q9Y6Z4 181 aa5.41□□□□□ -1.54
CSDE1-201ENST00000261443 IGHV7-81A0A0B4J1V7 117 aa5.41□□□□□ -1.54
CSDE1-201ENST00000261443 A0A0G2JNJ9 132 aa5.41□□□□□ -1.54
CSDE1-201ENST00000261443 A0A0J9YXV3 536 aa5.41□□□□□ -1.54
CSDE1-201ENST00000261443 SMIM9A6NGZ8 99 aa5.41□□□□□ -1.54
CSDE1-201ENST00000261443 J3KT08 172 aa5.41□□□□□ -1.54
CSDE1-201ENST00000261443 ACYP1P07311 99 aa5.41□□□□□ -1.54
CSDE1-201ENST00000261443 DEFB109BQ30KR1 87 aa5.41□□□□□ -1.54
CSDE1-201ENST00000261443 SPANXDQ9BXN6 97 aa5.41□□□□□ -1.54
CSDE1-201ENST00000261443 Q9UFV3 132 aa5.41□□□□□ -1.54
CSDE1-201ENST00000261443 TRBV27A0A0K0K1C4 114 aa5.4□□□□□ -1.54
CSDE1-201ENST00000261443 E7EQL1 145 aa5.4□□□□□ -1.54
CSDE1-201ENST00000261443 I3L3M4 83 aa5.4□□□□□ -1.54
CSDE1-201ENST00000261443 IGHV1-69P01742 117 aa5.4□□□□□ -1.54
CSDE1-201ENST00000261443 DEFB1P60022 68 aa5.4□□□□□ -1.54
CSDE1-201ENST00000261443 NPC2P61916 151 aa5.4□□□□□ -1.54
CSDE1-201ENST00000261443 C9orf139Q6ZV77 190 aa5.4□□□□□ -1.54
CSDE1-201ENST00000261443 FAM19A5Q7Z5A7 132 aaPredicted RBP5.4□□□□□ -1.54
CSDE1-201ENST00000261443 LRRC75A-AS1Q8N1F1 130 aa5.4□□□□□ -1.54
CSDE1-201ENST00000261443 EEF1AKMT3Q96AZ1 226 aa5.4□□□□□ -1.54
CSDE1-201ENST00000261443 LINC00526Q96FQ7 95 aa5.4□□□□□ -1.54
CSDE1-201ENST00000261443 KLK5Q9Y337 293 aaPredicted RBP5.4□□□□□ -1.54
CSDE1-201ENST00000261443 IGHV3-30-3P0DP02 117 aa5.4□□□□□ -1.54
CSDE1-201ENST00000261443 FAM110DQ8TAY7 271 aaPredicted RBP5.4□□□□□ -1.54
CSDE1-201ENST00000261443 CCDC140Q96MF4 163 aa5.4□□□□□ -1.54
CSDE1-201ENST00000261443 LITAFQ99732 161 aa5.4□□□□□ -1.54
CSDE1-201ENST00000261443 SPXQ9BT56 116 aa5.4□□□□□ -1.54
CSDE1-201ENST00000261443 PRRC2AP48634 2157 aaKnown RBP5.4□□□□□ -1.54
CSDE1-201ENST00000261443 VMO1Q7Z5L0 202 aa5.4□□□□□ -1.55
CSDE1-201ENST00000261443 ITLN2Q8WWU7 325 aaPredicted RBP5.4□□□□□ -1.55
CSDE1-201ENST00000261443 TIMM21Q9BVV7 248 aa5.4□□□□□ -1.55
CSDE1-201ENST00000261443 HRNRQ86YZ3 2850 aaPredicted RBP5.39□□□□□ -1.55
CSDE1-201ENST00000261443 ADAMTSL4-AS1Q5T5F5 129 aa5.39□□□□□ -1.55
CSDE1-201ENST00000261443 LINC00643Q86TS7 51 aa5.39□□□□□ -1.55
CSDE1-201ENST00000261443 OVOL1O14753 267 aa5.39□□□□□ -1.55
CSDE1-201ENST00000261443 NXPH4O95158 308 aa5.39□□□□□ -1.55
CSDE1-201ENST00000261443 FAM74A4Q5TZK3 123 aa5.39□□□□□ -1.55
CSDE1-201ENST00000261443 LY6G5BQ8NDX9 201 aa5.39□□□□□ -1.55
CSDE1-201ENST00000261443 SMCR5Q8TEV8 140 aa5.39□□□□□ -1.55
CSDE1-201ENST00000261443 UBTD1Q9HAC8 227 aa5.39□□□□□ -1.55
CSDE1-201ENST00000261443 SPANXCQ9NY87 97 aa5.39□□□□□ -1.55
CSDE1-201ENST00000261443 CRYBG3Q68DQ2 2970 aa5.39□□□□□ -1.55
CSDE1-201ENST00000261443 A0A1B0GX51 115 aa5.38□□□□□ -1.55
CSDE1-201ENST00000261443 ATP5G1P05496 136 aa5.38□□□□□ -1.55
CSDE1-201ENST00000261443 MIAQ16674 131 aa5.38□□□□□ -1.55
CSDE1-201ENST00000261443 Q8N6K4 173 aa5.38□□□□□ -1.55
CSDE1-201ENST00000261443 DUX5Q96PT3 197 aa5.38□□□□□ -1.55
CSDE1-201ENST00000261443 U3KQE9 123 aa5.38□□□□□ -1.55
CSDE1-201ENST00000261443 ODF3BA8MYP8 253 aa5.38□□□□□ -1.55
CSDE1-201ENST00000261443 NSUN5P1Q3KNT7 163 aa5.38□□□□□ -1.55
CSDE1-201ENST00000261443 GAGE2AQ6NT46 116 aa5.38□□□□□ -1.55
CSDE1-201ENST00000261443 Q8N9W7 124 aa5.38□□□□□ -1.55
CSDE1-201ENST00000261443 TRBV6-5A0A0K0K1A5 114 aa5.38□□□□□ -1.55
CSDE1-201ENST00000261443 F6UB75 175 aa5.38□□□□□ -1.55
CSDE1-201ENST00000261443 ATP6V0E1O15342 81 aa5.38□□□□□ -1.55
CSDE1-201ENST00000261443 RHOHQ15669 191 aa5.38□□□□□ -1.55
CSDE1-201ENST00000261443 TMEM61Q8N0U2 210 aa5.38□□□□□ -1.55
CSDE1-201ENST00000261443 EDA2RQ9HAV5 297 aa5.38□□□□□ -1.55
CSDE1-201ENST00000261443 NDUFA12Q9UI09 145 aa5.38□□□□□ -1.55
CSDE1-201ENST00000261443 IGLV4-3A0A075B6K6 122 aa5.37□□□□□ -1.55
CSDE1-201ENST00000261443 TRBV7-1A0A0A6YYK4 115 aa5.37□□□□□ -1.55
CSDE1-201ENST00000261443 COX7CP15954 63 aa5.37□□□□□ -1.55
CSDE1-201ENST00000261443 OR13C6PQ8NH95 151 aa5.37□□□□□ -1.55
CSDE1-201ENST00000261443 NOTCH3Q9UM47 2321 aa5.37□□□□□ -1.55
CSDE1-201ENST00000261443 TRAV41A0A0B4J266 112 aa5.37□□□□□ -1.55
CSDE1-201ENST00000261443 B9A039 149 aa5.37□□□□□ -1.55
CSDE1-201ENST00000261443 G3V318 75 aa5.37□□□□□ -1.55
CSDE1-201ENST00000261443 RPL11P62913 178 aaKnown RBP5.37□□□□□ -1.55
CSDE1-201ENST00000261443 C20orf203Q8NBC4 194 aa5.37□□□□□ -1.55
CSDE1-201ENST00000261443 DCANP1Q8TF63 244 aa5.37□□□□□ -1.55
CSDE1-201ENST00000261443 TMEM219Q86XT9 240 aa5.36□□□□□ -1.55
CSDE1-201ENST00000261443 TRAV12-3A0A0B4J271 114 aa5.36□□□□□ -1.55
CSDE1-201ENST00000261443 FAM19A4Q96LR4 140 aa5.36□□□□□ -1.55
CSDE1-201ENST00000261443 CREBBPQ92793 2442 aa5.36□□□□□ -1.55
CSDE1-201ENST00000261443 SETD2Q9BYW2 2564 aaPredicted RBP5.36□□□□□ -1.55
CSDE1-201ENST00000261443 IGKV3-7A0A075B6H7 116 aa5.36□□□□□ -1.55
CSDE1-201ENST00000261443 IGHV1-58A0A0C4DH39 117 aa5.36□□□□□ -1.55
CSDE1-201ENST00000261443 M0R1W7 72 aa5.36□□□□□ -1.55
CSDE1-201ENST00000261443 CXCL5P42830 114 aa5.36□□□□□ -1.55
CSDE1-201ENST00000261443 RPS28P62857 69 aaKnown RBP5.36□□□□□ -1.55
CSDE1-201ENST00000261443 M0QY20 66 aa5.35□□□□□ -1.55
CSDE1-201ENST00000261443 CRYGAP11844 174 aa5.35□□□□□ -1.55
CSDE1-201ENST00000261443 APRG1Q8IVJ8 170 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms