RNA–Protein interactions for RNA: ENST00000259006.7

LIMD2-201, Transcript of LIM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD2, Length 3,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-201ENST00000259006 Q6ZS46 218 aa10.55□□□□□ -0.72
LIMD2-201ENST00000259006 ZNF462Q96JM2 2506 aa10.55□□□□□ -0.72
LIMD2-201ENST00000259006 LRRK2Q5S007 2527 aa10.55□□□□□ -0.72
LIMD2-201ENST00000259006 OVOL1O14753 267 aa10.55□□□□□ -0.72
LIMD2-201ENST00000259006 NPBQ8NG41 125 aa10.55□□□□□ -0.72
LIMD2-201ENST00000259006 PHLDA3Q9Y5J5 127 aa10.55□□□□□ -0.72
LIMD2-201ENST00000259006 USP24Q9UPU5 2620 aa10.55□□□□□ -0.72
LIMD2-201ENST00000259006 TRBV7-7A0A0K0K1E9 115 aa10.55□□□□□ -0.72
LIMD2-201ENST00000259006 LINC01619G3V211 115 aa10.55□□□□□ -0.72
LIMD2-201ENST00000259006 DPH3Q96FX2 82 aa10.55□□□□□ -0.72
LIMD2-201ENST00000259006 JPT2Q9H910 190 aa10.55□□□□□ -0.72
LIMD2-201ENST00000259006 RNASE4P34096 147 aaKnown RBP10.54□□□□□ -0.72
LIMD2-201ENST00000259006 CNFNQ9BYD5 112 aa10.54□□□□□ -0.72
LIMD2-201ENST00000259006 VPS13CQ709C8 3753 aa10.54□□□□□ -0.72
LIMD2-201ENST00000259006 SUMO2P61956 95 aaKnown RBP10.54□□□□□ -0.72
LIMD2-201ENST00000259006 RPS28P62857 69 aaKnown RBP10.54□□□□□ -0.72
LIMD2-201ENST00000259006 Q5XG85 94 aa10.54□□□□□ -0.72
LIMD2-201ENST00000259006 ZNRF2Q8NHG8 242 aa10.54□□□□□ -0.72
LIMD2-201ENST00000259006 EEF1AKMT3Q96AZ1 226 aa10.54□□□□□ -0.72
LIMD2-201ENST00000259006 F5H697 171 aa10.53□□□□□ -0.72
LIMD2-201ENST00000259006 TRACP01848 142 aa10.53□□□□□ -0.72
LIMD2-201ENST00000259006 KLRB1Q12918 225 aa10.53□□□□□ -0.72
LIMD2-201ENST00000259006 RPL39P62891 51 aaKnown RBP10.53□□□□□ -0.72
LIMD2-201ENST00000259006 CDSNQ15517 529 aa10.53□□□□□ -0.72
LIMD2-201ENST00000259006 ATXN8Q156A1 80 aa10.53□□□□□ -0.72
LIMD2-201ENST00000259006 IGHV3-11P01762 117 aa10.53□□□□□ -0.72
LIMD2-201ENST00000259006 ZFP36P26651 326 aaKnown RBP10.53□□□□□ -0.72
LIMD2-201ENST00000259006 NACAE9PAV3 2078 aa10.52□□□□□ -0.72
LIMD2-201ENST00000259006 CLPSL1A2RUU4 121 aa10.52□□□□□ -0.73
LIMD2-201ENST00000259006 COX7CP15954 63 aa10.52□□□□□ -0.73
LIMD2-201ENST00000259006 C20orf173Q96LM9 149 aa10.52□□□□□ -0.73
LIMD2-201ENST00000259006 CCDC140Q96MF4 163 aa10.52□□□□□ -0.73
LIMD2-201ENST00000259006 METTL26Q96S19 204 aa10.52□□□□□ -0.73
LIMD2-201ENST00000259006 ZFAND3Q9H8U3 227 aa10.52□□□□□ -0.73
LIMD2-201ENST00000259006 A0A087WWL8 130 aa10.52□□□□□ -0.73
LIMD2-201ENST00000259006 RS1O15537 224 aa10.52□□□□□ -0.73
LIMD2-201ENST00000259006 RPL13AP40429 203 aaKnown RBP10.52□□□□□ -0.73
LIMD2-201ENST00000259006 EBI3Q14213 229 aa10.52□□□□□ -0.73
LIMD2-201ENST00000259006 FAM74A4Q5TZK3 123 aa10.52□□□□□ -0.73
LIMD2-201ENST00000259006 Q8N9W7 124 aa10.52□□□□□ -0.73
LIMD2-201ENST00000259006 C10orf105Q8TEF2 133 aa10.52□□□□□ -0.73
LIMD2-201ENST00000259006 UTP20O75691 2785 aaKnown RBP10.51□□□□□ -0.73
LIMD2-201ENST00000259006 COX8CQ7Z4L0 72 aa10.51□□□□□ -0.73
LIMD2-201ENST00000259006 FAM19A4Q96LR4 140 aa10.51□□□□□ -0.73
LIMD2-201ENST00000259006 USP9XQ93008 2570 aaPredicted RBP10.51□□□□□ -0.73
LIMD2-201ENST00000259006 TRBV10-2A0A0K0K1G8 114 aa10.51□□□□□ -0.73
LIMD2-201ENST00000259006 C11orf86A6NJI1 115 aa10.5□□□□□ -0.73
LIMD2-201ENST00000259006 IGKV3-20P01619 116 aa10.5□□□□□ -0.73
LIMD2-201ENST00000259006 TRBV12-3P01733 135 aa10.5□□□□□ -0.73
LIMD2-201ENST00000259006 PSMG3-AS1Q96PY0 264 aa10.5□□□□□ -0.73
LIMD2-201ENST00000259006 OPRPNQ99935 248 aaPredicted RBP10.5□□□□□ -0.73
LIMD2-201ENST00000259006 NEXN-AS1Q8NBZ9 246 aa10.5□□□□□ -0.73
LIMD2-201ENST00000259006 A0A0J9YY99 117 aa10.49□□□□□ -0.73
LIMD2-201ENST00000259006 LINC00336Q6ZUF6 198 aa10.49□□□□□ -0.73
LIMD2-201ENST00000259006 SLC50A1Q9BRV3 221 aa10.49□□□□□ -0.73
LIMD2-201ENST00000259006 PYGO1Q9Y3Y4 419 aa10.49□□□□□ -0.73
LIMD2-201ENST00000259006 UNQ9165/PRO28630Q6UXU0 137 aa10.49□□□□□ -0.73
LIMD2-201ENST00000259006 TP53TG1Q9Y2A0 90 aa10.49□□□□□ -0.73
LIMD2-201ENST00000259006 C2CD3Q4AC94 2353 aa10.49□□□□□ -0.73
LIMD2-201ENST00000259006 CRYBG3Q68DQ2 2970 aa10.49□□□□□ -0.73
LIMD2-201ENST00000259006 IGHV3-33P01772 117 aa10.49□□□□□ -0.73
LIMD2-201ENST00000259006 LY6G5BQ8NDX9 201 aa10.49□□□□□ -0.73
LIMD2-201ENST00000259006 POLQO75417 2590 aa10.48□□□□□ -0.73
LIMD2-201ENST00000259006 LINC01546A6NGU7 62 aa10.48□□□□□ -0.73
LIMD2-201ENST00000259006 IGHV3-30P01768 117 aa10.48□□□□□ -0.73
LIMD2-201ENST00000259006 IGHV3-30-5P0DP03 117 aa10.48□□□□□ -0.73
LIMD2-201ENST00000259006 ORMDL2Q53FV1 153 aa10.48□□□□□ -0.73
LIMD2-201ENST00000259006 MUC4Q99102 2169 aa10.47□□□□□ -0.73
LIMD2-201ENST00000259006 MALP21145 153 aa10.47□□□□□ -0.73
LIMD2-201ENST00000259006 TOMM6Q96B49 74 aa10.47□□□□□ -0.73
LIMD2-201ENST00000259006 ODF3BA8MYP8 253 aa10.47□□□□□ -0.73
LIMD2-201ENST00000259006 ZNF415Q09FC8 603 aa10.47□□□□□ -0.73
LIMD2-201ENST00000259006 PRO0628Q9UI54 55 aa10.47□□□□□ -0.73
LIMD2-201ENST00000259006 ADARB2-AS1A8MUL3 147 aa10.46□□□□□ -0.73
LIMD2-201ENST00000259006 EIF4EBP3O60516 100 aaPredicted RBP10.46□□□□□ -0.73
LIMD2-201ENST00000259006 SAA4P35542 130 aa10.46□□□□□ -0.73
LIMD2-201ENST00000259006 TSPEAR-AS2P59090 65 aa10.46□□□□□ -0.73
LIMD2-201ENST00000259006 DPH3P1Q9H4G8 78 aa10.46□□□□□ -0.73
LIMD2-201ENST00000259006 TRAV13-1A0A0B4J241 112 aa10.46□□□□□ -0.74
LIMD2-201ENST00000259006 CRYGAP11844 174 aa10.46□□□□□ -0.74
LIMD2-201ENST00000259006 A0A0U1RQV1 116 aa10.45□□□□□ -0.74
LIMD2-201ENST00000259006 H7C423 109 aa10.45□□□□□ -0.74
LIMD2-201ENST00000259006 SMCR5Q8TEV8 140 aa10.45□□□□□ -0.74
LIMD2-201ENST00000259006 CSMD2Q7Z408 3487 aa10.45□□□□□ -0.74
LIMD2-201ENST00000259006 FAM236DA0A1B0GTK5 79 aa10.45□□□□□ -0.74
LIMD2-201ENST00000259006 FAM236CP0DP71 79 aa10.45□□□□□ -0.74
LIMD2-201ENST00000259006 LY6EQ16553 131 aa10.45□□□□□ -0.74
LIMD2-201ENST00000259006 PRB1P04280 392 aa10.45□□□□□ -0.74
LIMD2-201ENST00000259006 CRYGDP07320 174 aa10.45□□□□□ -0.74
LIMD2-201ENST00000259006 COX6B1P14854 86 aa10.45□□□□□ -0.74
LIMD2-201ENST00000259006 PFN2P35080 140 aa10.45□□□□□ -0.74
LIMD2-201ENST00000259006 NPC2P61916 151 aa10.45□□□□□ -0.74
LIMD2-201ENST00000259006 FAM110DQ8TAY7 271 aaPredicted RBP10.45□□□□□ -0.74
LIMD2-201ENST00000259006 CLEC2BQ92478 149 aa10.45□□□□□ -0.74
LIMD2-201ENST00000259006 TRIAP1O43715 76 aa10.44□□□□□ -0.74
LIMD2-201ENST00000259006 GNLYP22749 145 aa10.44□□□□□ -0.74
LIMD2-201ENST00000259006 BRD3OSQ6XYD6 125 aa10.44□□□□□ -0.74
LIMD2-201ENST00000259006 C2orf48Q96LS8 159 aa10.44□□□□□ -0.74
LIMD2-201ENST00000259006 TRAV12-1A0A0B4J245 112 aa10.44□□□□□ -0.74
LIMD2-201ENST00000259006 HTN1P15515 57 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms