RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 MRAPQ8TCY5 172 aa11.27□□□□□ -0.6
UBE4B-201ENST00000253251 XCL1P47992 114 aa11.27□□□□□ -0.61
UBE4B-201ENST00000253251 SPATA12Q7Z6I5 190 aa11.27□□□□□ -0.61
UBE4B-201ENST00000253251 ADAMTS20P59510 1910 aa11.27□□□□□ -0.61
UBE4B-201ENST00000253251 LAMTOR3Q9UHA4 124 aa11.27□□□□□ -0.61
UBE4B-201ENST00000253251 RNASE13Q5GAN3 156 aaKnown RBP11.26□□□□□ -0.61
UBE4B-201ENST00000253251 UBE2WQ96B02 151 aa11.26□□□□□ -0.61
UBE4B-201ENST00000253251 AVPP01185 164 aa11.26□□□□□ -0.61
UBE4B-201ENST00000253251 HIST2H2BCQ6DN03 193 aa11.26□□□□□ -0.61
UBE4B-201ENST00000253251 IL17DQ8TAD2 202 aa11.26□□□□□ -0.61
UBE4B-201ENST00000253251 A0A0J9YXV3 536 aa11.25□□□□□ -0.61
UBE4B-201ENST00000253251 COX7A2LO14548 114 aa11.25□□□□□ -0.61
UBE4B-201ENST00000253251 CEP295Q9C0D2 2601 aa11.25□□□□□ -0.61
UBE4B-201ENST00000253251 Q6ZQT7 251 aa11.25□□□□□ -0.61
UBE4B-201ENST00000253251 Q9H8V8 135 aa11.25□□□□□ -0.61
UBE4B-201ENST00000253251 SRCAPQ6ZRS2 3230 aa11.25□□□□□ -0.61
UBE4B-201ENST00000253251 IGKV2D-24A0A075B6R9 120 aa11.25□□□□□ -0.61
UBE4B-201ENST00000253251 BAALCQ8WXS3 180 aa11.25□□□□□ -0.61
UBE4B-201ENST00000253251 IGLV2-11P01706 119 aa11.24□□□□□ -0.61
UBE4B-201ENST00000253251 INAFM2P0DMQ5 153 aa11.24□□□□□ -0.61
UBE4B-201ENST00000253251 AMTNQ6UX39 209 aa11.24□□□□□ -0.61
UBE4B-201ENST00000253251 HIGD1BQ9P298 99 aa11.24□□□□□ -0.61
UBE4B-201ENST00000253251 C11orf86A6NJI1 115 aa11.24□□□□□ -0.61
UBE4B-201ENST00000253251 CXCL5P42830 114 aa11.24□□□□□ -0.61
UBE4B-201ENST00000253251 TRAV8-3A0A0A6YYJ7 113 aa11.24□□□□□ -0.61
UBE4B-201ENST00000253251 TNRC6BQ9UPQ9 1833 aaKnown RBP11.24□□□□□ -0.61
UBE4B-201ENST00000253251 HCFC1P51610 2035 aa11.23□□□□□ -0.61
UBE4B-201ENST00000253251 C10orf99Q6UWK7 81 aa11.23□□□□□ -0.61
UBE4B-201ENST00000253251 C9JAW5 83 aa11.23□□□□□ -0.61
UBE4B-201ENST00000253251 CRYBA4P53673 196 aa11.23□□□□□ -0.61
UBE4B-201ENST00000253251 ANKRD11Q6UB99 2663 aaPredicted RBP11.23□□□□□ -0.61
UBE4B-201ENST00000253251 E9PLD3 99 aa11.23□□□□□ -0.61
UBE4B-201ENST00000253251 LINC00173Q6ZV60 143 aa11.23□□□□□ -0.61
UBE4B-201ENST00000253251 H7C423 109 aa11.22□□□□□ -0.61
UBE4B-201ENST00000253251 NXPH4O95158 308 aa11.22□□□□□ -0.61
UBE4B-201ENST00000253251 KRTAP10-9P60411 292 aa11.22□□□□□ -0.61
UBE4B-201ENST00000253251 FRMD6-AS1P0C7T7 363 aa11.22□□□□□ -0.61
UBE4B-201ENST00000253251 MIFP14174 115 aa11.22□□□□□ -0.61
UBE4B-201ENST00000253251 CLPSL2Q6UWE3 100 aa11.22□□□□□ -0.61
UBE4B-201ENST00000253251 CRIP1P50238 77 aa11.21□□□□□ -0.61
UBE4B-201ENST00000253251 KLLNB2CW77 178 aa11.21□□□□□ -0.61
UBE4B-201ENST00000253251 RPL39P62891 51 aaKnown RBP11.21□□□□□ -0.61
UBE4B-201ENST00000253251 SCRT2Q9NQ03 307 aa11.21□□□□□ -0.61
UBE4B-201ENST00000253251 ODF1Q14990 250 aa11.21□□□□□ -0.62
UBE4B-201ENST00000253251 C5orf38Q86SI9 138 aa11.21□□□□□ -0.62
UBE4B-201ENST00000253251 PCP2Q8IVA1 136 aa11.21□□□□□ -0.62
UBE4B-201ENST00000253251 KLK5Q9Y337 293 aaPredicted RBP11.21□□□□□ -0.62
UBE4B-201ENST00000253251 CCL25O15444 150 aa11.21□□□□□ -0.62
UBE4B-201ENST00000253251 C12orf74Q32Q52 190 aa11.21□□□□□ -0.62
UBE4B-201ENST00000253251 PIK3CD-AS1Q5SR53 167 aa11.21□□□□□ -0.62
UBE4B-201ENST00000253251 TM2D2Q9BX73 214 aa11.21□□□□□ -0.62
UBE4B-201ENST00000253251 ANKRD39Q53RE8 183 aa11.2□□□□□ -0.62
UBE4B-201ENST00000253251 VSIG2Q96IQ7 327 aa11.2□□□□□ -0.62
UBE4B-201ENST00000253251 SIGMAR1Q99720 223 aa11.2□□□□□ -0.62
UBE4B-201ENST00000253251 COX7B2Q8TF08 81 aa11.2□□□□□ -0.62
UBE4B-201ENST00000253251 F8W1H4 67 aa11.2□□□□□ -0.62
UBE4B-201ENST00000253251 RPL32P62910 135 aaKnown RBP11.2□□□□□ -0.62
UBE4B-201ENST00000253251 MAJINQ3KP22 176 aa11.2□□□□□ -0.62
UBE4B-201ENST00000253251 K7EP34 96 aa11.2□□□□□ -0.62
UBE4B-201ENST00000253251 TDRG1Q3Y452 100 aa11.2□□□□□ -0.62
UBE4B-201ENST00000253251 GDF5OSQ5U4N7 250 aa11.2□□□□□ -0.62
UBE4B-201ENST00000253251 U3KQK5 164 aa11.2□□□□□ -0.62
UBE4B-201ENST00000253251 A0A1W2PPM0 123 aa11.19□□□□□ -0.62
UBE4B-201ENST00000253251 Q6ZS46 218 aa11.19□□□□□ -0.62
UBE4B-201ENST00000253251 KIR2DL5BQ8NHK3 375 aa11.19□□□□□ -0.62
UBE4B-201ENST00000253251 Q6ZTI0 123 aa11.19□□□□□ -0.62
UBE4B-201ENST00000253251 DCANP1Q8TF63 244 aa11.19□□□□□ -0.62
UBE4B-201ENST00000253251 TP53TG3Q9ULZ0 132 aa11.19□□□□□ -0.62
UBE4B-201ENST00000253251 YPEL4Q96NS1 127 aa11.19□□□□□ -0.62
UBE4B-201ENST00000253251 CFC1BP0CG36 223 aa11.18□□□□□ -0.62
UBE4B-201ENST00000253251 CFC1P0CG37 223 aa11.18□□□□□ -0.62
UBE4B-201ENST00000253251 C16orf95Q9H693 158 aa11.18□□□□□ -0.62
UBE4B-201ENST00000253251 IGHV4-4A0A075B6R2 117 aa11.18□□□□□ -0.62
UBE4B-201ENST00000253251 TRBV6-5A0A0K0K1A5 114 aa11.18□□□□□ -0.62
UBE4B-201ENST00000253251 RS1O15537 224 aa11.18□□□□□ -0.62
UBE4B-201ENST00000253251 TRBV6-4A0A1B0GX49 114 aa11.17□□□□□ -0.62
UBE4B-201ENST00000253251 F8W735 103 aaPredicted RBP11.17□□□□□ -0.62
UBE4B-201ENST00000253251 MRPS12O15235 138 aaKnown RBP11.17□□□□□ -0.62
UBE4B-201ENST00000253251 CAMK2N2Q96S95 79 aa11.17□□□□□ -0.62
UBE4B-201ENST00000253251 HIVEP3Q5T1R4 2406 aa11.17□□□□□ -0.62
UBE4B-201ENST00000253251 PLXNB1O43157 2135 aa11.17□□□□□ -0.62
UBE4B-201ENST00000253251 SONP18583 2426 aaKnown RBP11.17□□□□□ -0.62
UBE4B-201ENST00000253251 SPATA25Q9BR10 227 aa11.17□□□□□ -0.62
UBE4B-201ENST00000253251 C11orf45Q8TAV5 145 aa11.16□□□□□ -0.62
UBE4B-201ENST00000253251 SOCS3O14543 225 aa11.16□□□□□ -0.62
UBE4B-201ENST00000253251 WDR87Q6ZQQ6 2873 aa11.16□□□□□ -0.62
UBE4B-201ENST00000253251 IGHV1-58A0A0C4DH39 117 aa11.16□□□□□ -0.62
UBE4B-201ENST00000253251 FAM222AQ5U5X8 452 aa11.16□□□□□ -0.62
UBE4B-201ENST00000253251 NDUFA1O15239 70 aa11.15□□□□□ -0.62
UBE4B-201ENST00000253251 PPDPFLQ8WWR9 84 aa11.15□□□□□ -0.62
UBE4B-201ENST00000253251 Q9HAA7 133 aa11.15□□□□□ -0.62
UBE4B-201ENST00000253251 IGHV3-30P01768 117 aa11.15□□□□□ -0.62
UBE4B-201ENST00000253251 IGHV3-33P01772 117 aa11.15□□□□□ -0.62
UBE4B-201ENST00000253251 IGHV3-30-3P0DP02 117 aa11.15□□□□□ -0.62
UBE4B-201ENST00000253251 IGHV3-30-5P0DP03 117 aa11.15□□□□□ -0.62
UBE4B-201ENST00000253251 PRRC2AP48634 2157 aaKnown RBP11.14□□□□□ -0.63
UBE4B-201ENST00000253251 TINCRA0A1B0GVN0 87 aa11.14□□□□□ -0.63
UBE4B-201ENST00000253251 CFAP126Q5VTH2 177 aa11.14□□□□□ -0.63
UBE4B-201ENST00000253251 CNFNQ9BYD5 112 aa11.14□□□□□ -0.63
UBE4B-201ENST00000253251 M0QY20 66 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms