RNA–Protein interactions for RNA: ENST00000249116.6

APOBEC3A-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3A, Length 1,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-201ENST00000249116 SSBP4Q9BWG4 385 aaPredicted RBP8.64□□□□□ -1.03
APOBEC3A-201ENST00000249116 GTSF1LQ9H1H1 148 aa8.64□□□□□ -1.03
APOBEC3A-201ENST00000249116 JPT2Q9H910 190 aa8.64□□□□□ -1.03
APOBEC3A-201ENST00000249116 XKRY2A2RUG3 117 aa8.63□□□□□ -1.03
APOBEC3A-201ENST00000249116 IGLC6P0CF74 106 aa8.63□□□□□ -1.03
APOBEC3A-201ENST00000249116 FAM231DQ6ZW35 169 aa8.63□□□□□ -1.03
APOBEC3A-201ENST00000249116 FER1L6-AS1Q8NA97 138 aa8.63□□□□□ -1.03
APOBEC3A-201ENST00000249116 TM2D2Q9BX73 214 aa8.63□□□□□ -1.03
APOBEC3A-201ENST00000249116 RPP21Q9H633 154 aaKnown RBP8.63□□□□□ -1.03
APOBEC3A-201ENST00000249116 LAGE3Q14657 143 aa8.63□□□□□ -1.03
APOBEC3A-201ENST00000249116 FAM74A3Q4VXF1 159 aa8.63□□□□□ -1.03
APOBEC3A-201ENST00000249116 UFSP1Q6NVU6 142 aa8.63□□□□□ -1.03
APOBEC3A-201ENST00000249116 ZFP2Q6ZN57 461 aa8.63□□□□□ -1.03
APOBEC3A-201ENST00000249116 SFRP2Q96HF1 295 aa8.63□□□□□ -1.03
APOBEC3A-201ENST00000249116 SAMD10Q9BYL1 202 aa8.63□□□□□ -1.03
APOBEC3A-201ENST00000249116 MUC21A0A0G2JKD1 596 aa8.62□□□□□ -1.03
APOBEC3A-201ENST00000249116 MUC21A0A140T8X8 626 aa8.62□□□□□ -1.03
APOBEC3A-201ENST00000249116 RHODO00212 210 aa8.62□□□□□ -1.03
APOBEC3A-201ENST00000249116 SPANXN1Q5VSR9 72 aa8.62□□□□□ -1.03
APOBEC3A-201ENST00000249116 Q6ZSN1 163 aa8.62□□□□□ -1.03
APOBEC3A-201ENST00000249116 TPPP3Q9BW30 176 aa8.62□□□□□ -1.03
APOBEC3A-201ENST00000249116 GATCO43716 136 aaKnown RBP8.61□□□□□ -1.03
APOBEC3A-201ENST00000249116 HAMPP81172 84 aa8.61□□□□□ -1.03
APOBEC3A-201ENST00000249116 TMEM241Q24JQ0 296 aa8.61□□□□□ -1.03
APOBEC3A-201ENST00000249116 FAM74A4Q5TZK3 123 aa8.61□□□□□ -1.03
APOBEC3A-201ENST00000249116 NAT8Q9UHE5 227 aa8.61□□□□□ -1.03
APOBEC3A-201ENST00000249116 A0A087WWL8 130 aa8.6□□□□□ -1.03
APOBEC3A-201ENST00000249116 GAGE12JA6NER3 117 aa8.6□□□□□ -1.03
APOBEC3A-201ENST00000249116 CTRLP40313 264 aa8.6□□□□□ -1.03
APOBEC3A-201ENST00000249116 RPL23P62829 140 aaKnown RBP8.6□□□□□ -1.03
APOBEC3A-201ENST00000249116 GAGE1Q13065 139 aa8.6□□□□□ -1.03
APOBEC3A-201ENST00000249116 GAGE4Q13068 117 aa8.6□□□□□ -1.03
APOBEC3A-201ENST00000249116 GAGE5Q13069 117 aa8.6□□□□□ -1.03
APOBEC3A-201ENST00000249116 GAGE13Q4V321 117 aa8.6□□□□□ -1.03
APOBEC3A-201ENST00000249116 ISOC2Q96AB3 205 aa8.6□□□□□ -1.03
APOBEC3A-201ENST00000249116 TRAV8-3A0A0A6YYJ7 113 aa8.59□□□□□ -1.03
APOBEC3A-201ENST00000249116 F2Z2F3 143 aa8.59□□□□□ -1.03
APOBEC3A-201ENST00000249116 CACNG7P62955 275 aa8.59□□□□□ -1.03
APOBEC3A-201ENST00000249116 ADIRFQ15847 76 aa8.59□□□□□ -1.03
APOBEC3A-201ENST00000249116 CT83Q5H943 113 aa8.59□□□□□ -1.03
APOBEC3A-201ENST00000249116 LYZL1Q6UWQ5 148 aa8.59□□□□□ -1.03
APOBEC3A-201ENST00000249116 AP1S3Q96PC3 154 aa8.59□□□□□ -1.03
APOBEC3A-201ENST00000249116 OSTCQ9NRP0 149 aa8.59□□□□□ -1.03
APOBEC3A-201ENST00000249116 A0A087WWC5 75 aa8.58□□□□□ -1.04
APOBEC3A-201ENST00000249116 SSTP61278 116 aa8.58□□□□□ -1.04
APOBEC3A-201ENST00000249116 GTSF1Q8WW33 167 aa8.58□□□□□ -1.04
APOBEC3A-201ENST00000249116 A8MWL6 223 aa8.57□□□□□ -1.04
APOBEC3A-201ENST00000249116 C14orf178Q8N769 122 aaPredicted RBP8.57□□□□□ -1.04
APOBEC3A-201ENST00000249116 C15orf54Q8N8G6 183 aa8.57□□□□□ -1.04
APOBEC3A-201ENST00000249116 CNFNQ9BYD5 112 aa8.57□□□□□ -1.04
APOBEC3A-201ENST00000249116 COX11Q9Y6N1 276 aa8.57□□□□□ -1.04
APOBEC3A-201ENST00000249116 LINC00694P0DN24 101 aa8.56□□□□□ -1.04
APOBEC3A-201ENST00000249116 ZNF56Q15929 161 aa8.56□□□□□ -1.04
APOBEC3A-201ENST00000249116 FAM30AQ9NZY2 134 aa8.56□□□□□ -1.04
APOBEC3A-201ENST00000249116 KIF25-AS1Q9Y6Z4 181 aa8.56□□□□□ -1.04
APOBEC3A-201ENST00000249116 URGCP-MRPS24S4R325 110 aa8.56□□□□□ -1.04
APOBEC3A-201ENST00000249116 V9GYV3 84 aa8.56□□□□□ -1.04
APOBEC3A-201ENST00000249116 PLA2G1BP04054 148 aaKnown RBP8.55□□□□□ -1.04
APOBEC3A-201ENST00000249116 TRGC1P0CF51 173 aa8.55□□□□□ -1.04
APOBEC3A-201ENST00000249116 SMIM17P0DL12 118 aa8.55□□□□□ -1.04
APOBEC3A-201ENST00000249116 NTF3P20783 257 aa8.55□□□□□ -1.04
APOBEC3A-201ENST00000249116 RAB4BP61018 213 aa8.55□□□□□ -1.04
APOBEC3A-201ENST00000249116 WDR73Q6P4I2 378 aa8.55□□□□□ -1.04
APOBEC3A-201ENST00000249116 DAZ4Q86SG3 579 aaKnown RBP8.55□□□□□ -1.04
APOBEC3A-201ENST00000249116 TSKUQ8WUA8 353 aa8.55□□□□□ -1.04
APOBEC3A-201ENST00000249116 RMI2Q96E14 147 aa8.55□□□□□ -1.04
APOBEC3A-201ENST00000249116 DAZ3Q9NR90 486 aaKnown RBP8.55□□□□□ -1.04
APOBEC3A-201ENST00000249116 VPS13BQ7Z7G8 4022 aa8.55□□□□□ -1.04
APOBEC3A-201ENST00000249116 WFDC2Q14508 124 aa8.54□□□□□ -1.04
APOBEC3A-201ENST00000249116 UQCC3Q6UW78 93 aa8.54□□□□□ -1.04
APOBEC3A-201ENST00000249116 OR10G8Q8NGN5 311 aa8.54□□□□□ -1.04
APOBEC3A-201ENST00000249116 KRTAP4-8Q9BYQ9 185 aa8.54□□□□□ -1.04
APOBEC3A-201ENST00000249116 GFRA4Q9GZZ7 299 aa8.54□□□□□ -1.04
APOBEC3A-201ENST00000249116 Q9UF83 564 aa8.54□□□□□ -1.04
APOBEC3A-201ENST00000249116 HERC1Q15751 4861 aa8.54□□□□□ -1.04
APOBEC3A-201ENST00000249116 FAM231BA6NCW3 169 aa8.54□□□□□ -1.04
APOBEC3A-201ENST00000249116 HIGD1CA8MV81 97 aa8.54□□□□□ -1.04
APOBEC3A-201ENST00000249116 LECT2O14960 151 aa8.54□□□□□ -1.04
APOBEC3A-201ENST00000249116 FOXA3P55318 350 aaPredicted RBP8.54□□□□□ -1.04
APOBEC3A-201ENST00000249116 TWIST1Q15672 202 aa8.54□□□□□ -1.04
APOBEC3A-201ENST00000249116 PGLYRP4Q96LB8 373 aa8.54□□□□□ -1.04
APOBEC3A-201ENST00000249116 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.53□□□□□ -1.04
APOBEC3A-201ENST00000249116 TRBV10-1A0A0K0K1A3 114 aa8.53□□□□□ -1.04
APOBEC3A-201ENST00000249116 MGPP08493 103 aa8.53□□□□□ -1.04
APOBEC3A-201ENST00000249116 COMMD7Q86VX2 200 aa8.53□□□□□ -1.04
APOBEC3A-201ENST00000249116 BAALCQ8WXS3 180 aa8.53□□□□□ -1.04
APOBEC3A-201ENST00000249116 DPH3P1Q9H4G8 78 aa8.53□□□□□ -1.04
APOBEC3A-201ENST00000249116 FAT1Q14517 4588 aa8.52□□□□□ -1.05
APOBEC3A-201ENST00000249116 F5H697 171 aa8.52□□□□□ -1.05
APOBEC3A-201ENST00000249116 PNRC1Q12796 327 aaPredicted RBP8.52□□□□□ -1.05
APOBEC3A-201ENST00000249116 ELOBQ15370 118 aa8.52□□□□□ -1.05
APOBEC3A-201ENST00000249116 KCNIP4Q6PIL6 250 aa8.52□□□□□ -1.05
APOBEC3A-201ENST00000249116 Q6ZSA8 131 aa8.52□□□□□ -1.05
APOBEC3A-201ENST00000249116 NIT1Q86X76 327 aa8.52□□□□□ -1.05
APOBEC3A-201ENST00000249116 Q8N976 141 aa8.52□□□□□ -1.05
APOBEC3A-201ENST00000249116 BORCS7Q96B45 105 aa8.52□□□□□ -1.05
APOBEC3A-201ENST00000249116 DMBT1Q9UGM3 2413 aaPredicted RBP8.51□□□□□ -1.05
APOBEC3A-201ENST00000249116 IGKV2D-24A0A075B6R9 120 aa8.51□□□□□ -1.05
APOBEC3A-201ENST00000249116 A0A087WX48 190 aa8.51□□□□□ -1.05
APOBEC3A-201ENST00000249116 LINC00862A6NCI5 91 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms