RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 IGLC6P0CF74 106 aa8.84□□□□□ -0.99
SOX9-201ENST00000245479 SNRPD3P62318 126 aaKnown RBP8.84□□□□□ -0.99
SOX9-201ENST00000245479 MRGPRG-AS1Q2M3A8 158 aa8.84□□□□□ -0.99
SOX9-201ENST00000245479 DEFB136Q30KP8 78 aa8.84□□□□□ -0.99
SOX9-201ENST00000245479 Q8N9W7 124 aa8.84□□□□□ -0.99
SOX9-201ENST00000245479 U3KQK5 164 aa8.84□□□□□ -0.99
SOX9-201ENST00000245479 ITPR3Q14573 2671 aa8.83□□□□□ -1
SOX9-201ENST00000245479 IGHV4-30-2A0A087WSY4 118 aa8.83□□□□□ -1
SOX9-201ENST00000245479 HIST2H2BCQ6DN03 193 aa8.83□□□□□ -1
SOX9-201ENST00000245479 GNRH2O43555 120 aa8.83□□□□□ -1
SOX9-201ENST00000245479 MUSTN1Q8IVN3 82 aa8.83□□□□□ -1
SOX9-201ENST00000245479 TOMM7Q9P0U1 55 aa8.83□□□□□ -1
SOX9-201ENST00000245479 WI2-2373I1.2A0A1W2PRP0 233 aa8.83□□□□□ -1
SOX9-201ENST00000245479 KNCNA6PVL3 124 aa8.83□□□□□ -1
SOX9-201ENST00000245479 PIMREGQ9BSJ6 248 aa8.83□□□□□ -1
SOX9-201ENST00000245479 USP24Q9UPU5 2620 aa8.82□□□□□ -1
SOX9-201ENST00000245479 CENPVL3A0A0U1RRI6 287 aa8.82□□□□□ -1
SOX9-201ENST00000245479 FAM236AA0A1B0GUQ0 79 aa8.82□□□□□ -1
SOX9-201ENST00000245479 FAM236BA0A1B0GV22 79 aa8.82□□□□□ -1
SOX9-201ENST00000245479 RPL39P62891 51 aaKnown RBP8.82□□□□□ -1
SOX9-201ENST00000245479 Q8N1Y9 231 aa8.82□□□□□ -1
SOX9-201ENST00000245479 LINC00574Q9H8X3 128 aa8.82□□□□□ -1
SOX9-201ENST00000245479 NDUFA12Q9UI09 145 aa8.82□□□□□ -1
SOX9-201ENST00000245479 IGLV11-55A0A075B6I3 123 aa8.82□□□□□ -1
SOX9-201ENST00000245479 RS1O15537 224 aa8.82□□□□□ -1
SOX9-201ENST00000245479 PRM2P04554 102 aa8.82□□□□□ -1
SOX9-201ENST00000245479 RNF185Q96GF1 192 aa8.82□□□□□ -1
SOX9-201ENST00000245479 C8orf31Q8N9H6 132 aa8.81□□□□□ -1
SOX9-201ENST00000245479 LY6G5BQ8NDX9 201 aa8.81□□□□□ -1
SOX9-201ENST00000245479 KLK9Q9UKQ9 250 aa8.81□□□□□ -1
SOX9-201ENST00000245479 RNF223E7ERA6 249 aa8.81□□□□□ -1
SOX9-201ENST00000245479 HELZ2Q9BYK8 2649 aaKnown RBP8.81□□□□□ -1
SOX9-201ENST00000245479 TOMM6Q96B49 74 aa8.81□□□□□ -1
SOX9-201ENST00000245479 RHPN1-AS1Q9BWJ2 59 aa8.81□□□□□ -1
SOX9-201ENST00000245479 JPT2Q9H910 190 aa8.81□□□□□ -1
SOX9-201ENST00000245479 TEX49A0A1B0GTD5 131 aa8.8□□□□□ -1
SOX9-201ENST00000245479 SYNJ2BPP57105 145 aa8.8□□□□□ -1
SOX9-201ENST00000245479 HIST1H4AP62805 103 aaKnown RBP8.8□□□□□ -1
SOX9-201ENST00000245479 TRAV4A0A0B4J268 109 aa8.8□□□□□ -1
SOX9-201ENST00000245479 CCDC179H3BU77 68 aa8.8□□□□□ -1
SOX9-201ENST00000245479 MRPL23Q16540 153 aaKnown RBP8.8□□□□□ -1
SOX9-201ENST00000245479 TRBV7-3A0A075B6L6 115 aa8.8□□□□□ -1
SOX9-201ENST00000245479 M0R1W7 72 aa8.8□□□□□ -1
SOX9-201ENST00000245479 IGHV4-59P01825 116 aa8.8□□□□□ -1
SOX9-201ENST00000245479 IGF2-ASQ6U949 168 aa8.8□□□□□ -1
SOX9-201ENST00000245479 PIFOQ8TCI5 191 aa8.8□□□□□ -1
SOX9-201ENST00000245479 BSNQ9UPA5 3926 aa8.79□□□□□ -1
SOX9-201ENST00000245479 RNASE13Q5GAN3 156 aaKnown RBP8.79□□□□□ -1
SOX9-201ENST00000245479 TRBV7-1A0A0A6YYK4 115 aa8.79□□□□□ -1
SOX9-201ENST00000245479 RBAKDNA6NC62 111 aa8.79□□□□□ -1
SOX9-201ENST00000245479 CRYGBP07316 175 aa8.79□□□□□ -1
SOX9-201ENST00000245479 UBE2E1P51965 193 aa8.79□□□□□ -1
SOX9-201ENST00000245479 IGHV1-69DA0A0B4J2H0 117 aa8.78□□□□□ -1
SOX9-201ENST00000245479 A0A0J9YXV3 536 aa8.78□□□□□ -1
SOX9-201ENST00000245479 TNFRSF13BO14836 293 aaPredicted RBP8.78□□□□□ -1
SOX9-201ENST00000245479 GATA3P23771 443 aa8.78□□□□□ -1
SOX9-201ENST00000245479 RPL32P62910 135 aaKnown RBP8.78□□□□□ -1
SOX9-201ENST00000245479 SMAD5-AS1Q9Y6J3 95 aa8.78□□□□□ -1
SOX9-201ENST00000245479 TEP1Q99973 2627 aaKnown RBP8.78□□□□□ -1
SOX9-201ENST00000245479 SPINK13Q1W4C9 94 aa8.78□□□□□ -1
SOX9-201ENST00000245479 CHCHD5Q9BSY4 110 aa8.78□□□□□ -1
SOX9-201ENST00000245479 TRBV10-2A0A0K0K1G8 114 aa8.78□□□□□ -1
SOX9-201ENST00000245479 UBE2L6O14933 153 aa8.78□□□□□ -1
SOX9-201ENST00000245479 BUB3O43684 328 aa8.78□□□□□ -1
SOX9-201ENST00000245479 IGHG4P01861 327 aa8.78□□□□□ -1
SOX9-201ENST00000245479 FSTL3O95633 263 aa8.77□□□□□ -1
SOX9-201ENST00000245479 MORN3Q6PF18 240 aaPredicted RBP8.77□□□□□ -1
SOX9-201ENST00000245479 A0A0J9YY99 117 aa8.77□□□□□ -1.01
SOX9-201ENST00000245479 NFE4Q86UQ8 179 aa8.77□□□□□ -1.01
SOX9-201ENST00000245479 FAM110DQ8TAY7 271 aaPredicted RBP8.77□□□□□ -1.01
SOX9-201ENST00000245479 CCDC140Q96MF4 163 aa8.77□□□□□ -1.01
SOX9-201ENST00000245479 VPS13CQ709C8 3753 aa8.77□□□□□ -1.01
SOX9-201ENST00000245479 ITLN2Q8WWU7 325 aaPredicted RBP8.77□□□□□ -1.01
SOX9-201ENST00000245479 TMEM126AQ9H061 195 aa8.77□□□□□ -1.01
SOX9-201ENST00000245479 TRGV11A0A075B6L2 103 aa8.76□□□□□ -1.01
SOX9-201ENST00000245479 NEXN-AS1Q8NBZ9 246 aa8.76□□□□□ -1.01
SOX9-201ENST00000245479 MOB4Q9Y3A3 225 aa8.76□□□□□ -1.01
SOX9-201ENST00000245479 LMO4P61968 165 aa8.76□□□□□ -1.01
SOX9-201ENST00000245479 PRIMA1Q86XR5 153 aa8.76□□□□□ -1.01
SOX9-201ENST00000245479 LY6LH3BQJ8 138 aa8.76□□□□□ -1.01
SOX9-201ENST00000245479 GATD1Q8NB37 220 aa8.76□□□□□ -1.01
SOX9-201ENST00000245479 CLEC2BQ92478 149 aa8.76□□□□□ -1.01
SOX9-201ENST00000245479 ICOSQ9Y6W8 199 aa8.76□□□□□ -1.01
SOX9-201ENST00000245479 OOSP1A8MZH6 123 aa8.75□□□□□ -1.01
SOX9-201ENST00000245479 LEPROTO15243 131 aa8.75□□□□□ -1.01
SOX9-201ENST00000245479 PHLDA1Q8WV24 401 aaPredicted RBP8.75□□□□□ -1.01
SOX9-201ENST00000245479 MINOS1Q5TGZ0 78 aa8.75□□□□□ -1.01
SOX9-201ENST00000245479 C11orf21Q9P2W6 132 aa8.75□□□□□ -1.01
SOX9-201ENST00000245479 MINOS1-NBL1R4GNA1 71 aa8.75□□□□□ -1.01
SOX9-201ENST00000245479 IGHV1-69P01742 117 aa8.75□□□□□ -1.01
SOX9-201ENST00000245479 INAFM2P0DMQ5 153 aa8.75□□□□□ -1.01
SOX9-201ENST00000245479 IGHV3-16A0A0C4DH30 117 aa8.74□□□□□ -1.01
SOX9-201ENST00000245479 RHODO00212 210 aa8.74□□□□□ -1.01
SOX9-201ENST00000245479 CDIP1Q9H305 208 aa8.74□□□□□ -1.01
SOX9-201ENST00000245479 I3L3M4 83 aa8.74□□□□□ -1.01
SOX9-201ENST00000245479 CRPP02741 224 aa8.74□□□□□ -1.01
SOX9-201ENST00000245479 SLC25A29Q8N8R3 303 aa8.74□□□□□ -1.01
SOX9-201ENST00000245479 OPRPNQ99935 248 aaPredicted RBP8.74□□□□□ -1.01
SOX9-201ENST00000245479 ATRQ13535 2644 aa8.74□□□□□ -1.01
SOX9-201ENST00000245479 TRACP01848 142 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms