RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 COX11Q9Y6N1 276 aa14.01□□□□□ -0.17
CLIP2-201ENST00000223398 FAM222AQ5U5X8 452 aa14□□□□□ -0.17
CLIP2-201ENST00000223398 GTSF1LQ9H1H1 148 aa14□□□□□ -0.17
CLIP2-201ENST00000223398 SMR3AQ99954 134 aa14□□□□□ -0.17
CLIP2-201ENST00000223398 NDUFA1O15239 70 aa14□□□□□ -0.17
CLIP2-201ENST00000223398 HERV-K104P63124 156 aa14□□□□□ -0.17
CLIP2-201ENST00000223398 LINC00173Q6ZV60 143 aa14□□□□□ -0.17
CLIP2-201ENST00000223398 TRBV20-1A0A075B6N2 111 aa13.99□□□□□ -0.17
CLIP2-201ENST00000223398 Q6ZPA2 131 aa13.99□□□□□ -0.17
CLIP2-201ENST00000223398 UBL5Q9BZL1 73 aa13.99□□□□□ -0.17
CLIP2-201ENST00000223398 PKIGQ9Y2B9 76 aa13.99□□□□□ -0.17
CLIP2-201ENST00000223398 NDUFS5O43920 106 aa13.99□□□□□ -0.17
CLIP2-201ENST00000223398 BVES-AS1Q5T3Y7 98 aa13.99□□□□□ -0.17
CLIP2-201ENST00000223398 NCR3O14931 201 aa13.99□□□□□ -0.17
CLIP2-201ENST00000223398 P0DMU3 169 aa13.99□□□□□ -0.17
CLIP2-201ENST00000223398 FAM231AP0DMU4 169 aa13.99□□□□□ -0.17
CLIP2-201ENST00000223398 FAM231CP0DMU5 169 aa13.99□□□□□ -0.17
CLIP2-201ENST00000223398 BRWD1-AS2P59051 145 aa13.99□□□□□ -0.17
CLIP2-201ENST00000223398 CEP192Q8TEP8 1941 aa13.98□□□□□ -0.17
CLIP2-201ENST00000223398 UBE2AP49459 152 aa13.98□□□□□ -0.17
CLIP2-201ENST00000223398 IL17DQ8TAD2 202 aa13.98□□□□□ -0.17
CLIP2-201ENST00000223398 RNF183Q96D59 192 aa13.98□□□□□ -0.17
CLIP2-201ENST00000223398 LINC00574Q9H8X3 128 aa13.98□□□□□ -0.17
CLIP2-201ENST00000223398 PRRC2AP48634 2157 aaKnown RBP13.97□□□□□ -0.17
CLIP2-201ENST00000223398 C9orf118A6NHY6 69 aa13.97□□□□□ -0.17
CLIP2-201ENST00000223398 CCL25O15444 150 aa13.97□□□□□ -0.17
CLIP2-201ENST00000223398 SPAG11BQ08648 103 aa13.97□□□□□ -0.17
CLIP2-201ENST00000223398 SND1-IT1Q9HBX3 110 aa13.97□□□□□ -0.17
CLIP2-201ENST00000223398 PCNX3Q9H6A9 2034 aa13.97□□□□□ -0.17
CLIP2-201ENST00000223398 CEMP1Q6PRD7 247 aaPredicted RBP13.96□□□□□ -0.17
CLIP2-201ENST00000223398 IGKV2-24A0A0C4DH68 120 aa13.96□□□□□ -0.18
CLIP2-201ENST00000223398 KRTAP10-9P60411 292 aa13.96□□□□□ -0.18
CLIP2-201ENST00000223398 PRB2P02812 416 aaPredicted RBP13.95□□□□□ -0.18
CLIP2-201ENST00000223398 HIGD2BQ4VC39 106 aa13.95□□□□□ -0.18
CLIP2-201ENST00000223398 OPRPNQ99935 248 aaPredicted RBP13.95□□□□□ -0.18
CLIP2-201ENST00000223398 DEFB131BA0A096LNP1 70 aa13.95□□□□□ -0.18
CLIP2-201ENST00000223398 IGHV4-28A0A0C4DH34 117 aa13.95□□□□□ -0.18
CLIP2-201ENST00000223398 ZNF80P51504 273 aaPredicted RBP13.95□□□□□ -0.18
CLIP2-201ENST00000223398 HILS1P60008 231 aa13.95□□□□□ -0.18
CLIP2-201ENST00000223398 ETDBQ3ZM63 59 aa13.95□□□□□ -0.18
CLIP2-201ENST00000223398 NAV3Q8IVL0 2385 aa13.94□□□□□ -0.18
CLIP2-201ENST00000223398 LGALS9O00182 355 aa13.94□□□□□ -0.18
CLIP2-201ENST00000223398 LINC01006Q8NI28 216 aa13.94□□□□□ -0.18
CLIP2-201ENST00000223398 RS1O15537 224 aa13.93□□□□□ -0.18
CLIP2-201ENST00000223398 C12orf74Q32Q52 190 aa13.93□□□□□ -0.18
CLIP2-201ENST00000223398 H3BMG7 143 aa13.93□□□□□ -0.18
CLIP2-201ENST00000223398 GAGE12HA6NDE8 117 aa13.93□□□□□ -0.18
CLIP2-201ENST00000223398 K7EQG2 157 aa13.93□□□□□ -0.18
CLIP2-201ENST00000223398 CFC1BP0CG36 223 aa13.93□□□□□ -0.18
CLIP2-201ENST00000223398 CFC1P0CG37 223 aa13.93□□□□□ -0.18
CLIP2-201ENST00000223398 C18orf65Q6ZTR6 163 aa13.93□□□□□ -0.18
CLIP2-201ENST00000223398 C20orf173Q96LM9 149 aa13.93□□□□□ -0.18
CLIP2-201ENST00000223398 LY6LH3BQJ8 138 aa13.92□□□□□ -0.18
CLIP2-201ENST00000223398 SPATA25Q9BR10 227 aa13.92□□□□□ -0.18
CLIP2-201ENST00000223398 ARHGAP21Q5T5U3 1957 aa13.92□□□□□ -0.18
CLIP2-201ENST00000223398 ALPK3Q96L96 1907 aa13.92□□□□□ -0.18
CLIP2-201ENST00000223398 NDUFS6O75380 124 aaKnown RBP13.92□□□□□ -0.18
CLIP2-201ENST00000223398 CRIP3Q6Q6R5 217 aa13.92□□□□□ -0.18
CLIP2-201ENST00000223398 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.92□□□□□ -0.18
CLIP2-201ENST00000223398 ZNF702PQ9H963 129 aa13.92□□□□□ -0.18
CLIP2-201ENST00000223398 MED14OSP0DP75 135 aa13.91□□□□□ -0.18
CLIP2-201ENST00000223398 P0C879 139 aa13.91□□□□□ -0.18
CLIP2-201ENST00000223398 MUSTN1Q8IVN3 82 aa13.91□□□□□ -0.18
CLIP2-201ENST00000223398 BAALCQ8WXS3 180 aa13.91□□□□□ -0.18
CLIP2-201ENST00000223398 NUPR1O60356 82 aa13.91□□□□□ -0.18
CLIP2-201ENST00000223398 FRMD6-AS1P0C7T7 363 aa13.91□□□□□ -0.18
CLIP2-201ENST00000223398 CTRLP40313 264 aa13.91□□□□□ -0.18
CLIP2-201ENST00000223398 ORMDL1Q9P0S3 153 aa13.91□□□□□ -0.18
CLIP2-201ENST00000223398 PRSS47A8MTI9 375 aa13.9□□□□□ -0.18
CLIP2-201ENST00000223398 Q6ZS46 218 aa13.9□□□□□ -0.18
CLIP2-201ENST00000223398 C15orf53Q8NAA6 179 aa13.9□□□□□ -0.18
CLIP2-201ENST00000223398 TTTY13Q9BZ97 58 aa13.9□□□□□ -0.18
CLIP2-201ENST00000223398 LINC00269Q8N2A0 174 aa13.9□□□□□ -0.18
CLIP2-201ENST00000223398 FSTL3O95633 263 aa13.89□□□□□ -0.19
CLIP2-201ENST00000223398 BAALC-AS2P0C853 105 aa13.89□□□□□ -0.19
CLIP2-201ENST00000223398 MRPL52Q86TS9 123 aaKnown RBP13.89□□□□□ -0.19
CLIP2-201ENST00000223398 WFDC10AQ9H1F0 79 aa13.89□□□□□ -0.19
CLIP2-201ENST00000223398 TRBV6-1A0A0K0K1D8 114 aa13.88□□□□□ -0.19
CLIP2-201ENST00000223398 A0A1W2PPM0 123 aa13.88□□□□□ -0.19
CLIP2-201ENST00000223398 TOMM6Q96B49 74 aa13.88□□□□□ -0.19
CLIP2-201ENST00000223398 CRYGBP07316 175 aa13.88□□□□□ -0.19
CLIP2-201ENST00000223398 EBI3Q14213 229 aa13.88□□□□□ -0.19
CLIP2-201ENST00000223398 ANKRD39Q53RE8 183 aa13.87□□□□□ -0.19
CLIP2-201ENST00000223398 GDF5OSQ5U4N7 250 aa13.87□□□□□ -0.19
CLIP2-201ENST00000223398 PPDPFLQ8WWR9 84 aa13.87□□□□□ -0.19
CLIP2-201ENST00000223398 Q6ZUT4 128 aa13.87□□□□□ -0.19
CLIP2-201ENST00000223398 CRYGDP07320 174 aa13.86□□□□□ -0.19
CLIP2-201ENST00000223398 NTN5Q8WTR8 489 aaPredicted RBP13.86□□□□□ -0.19
CLIP2-201ENST00000223398 PSMG3-AS1Q96PY0 264 aa13.86□□□□□ -0.19
CLIP2-201ENST00000223398 SIVA1O15304 175 aa13.86□□□□□ -0.19
CLIP2-201ENST00000223398 A4D1N5 150 aa13.85□□□□□ -0.19
CLIP2-201ENST00000223398 K7EP34 96 aa13.85□□□□□ -0.19
CLIP2-201ENST00000223398 TRBV10-1A0A0K0K1A3 114 aa13.85□□□□□ -0.19
CLIP2-201ENST00000223398 LYRM9A8MSI8 78 aa13.85□□□□□ -0.19
CLIP2-201ENST00000223398 C20orf203Q8NBC4 194 aa13.85□□□□□ -0.19
CLIP2-201ENST00000223398 C4orf48Q5BLP8 95 aa13.85□□□□□ -0.19
CLIP2-201ENST00000223398 C11orf1Q9H5F2 150 aa13.85□□□□□ -0.19
CLIP2-201ENST00000223398 NUP210LQ5VU65 1888 aa13.85□□□□□ -0.19
CLIP2-201ENST00000223398 LINC00322Q6ZN03 302 aaPredicted RBP13.85□□□□□ -0.19
CLIP2-201ENST00000223398 C11orf86A6NJI1 115 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 143.1 ms