RNA–Protein interactions for RNA: ENST00000222345.10

SIPA1L3-201, Transcript of signal induced proliferation associated 1 like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1L3, Length 7,987 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L3-201ENST00000222345 CGB3P0DN86 165 aa10.63□□□□□ -0.71
SIPA1L3-201ENST00000222345 LOXP28300 417 aaPredicted RBP10.63□□□□□ -0.71
SIPA1L3-201ENST00000222345 SMIM9A6NGZ8 99 aa10.63□□□□□ -0.71
SIPA1L3-201ENST00000222345 ENHOQ6UWT2 76 aa10.63□□□□□ -0.71
SIPA1L3-201ENST00000222345 IGKV2D-26A0A0A0MRZ7 120 aa10.63□□□□□ -0.71
SIPA1L3-201ENST00000222345 MSMBP08118 114 aa10.62□□□□□ -0.71
SIPA1L3-201ENST00000222345 TTTY13Q9BZ97 58 aa10.62□□□□□ -0.71
SIPA1L3-201ENST00000222345 LINC00694P0DN24 101 aa10.62□□□□□ -0.71
SIPA1L3-201ENST00000222345 COX7BP24311 80 aa10.62□□□□□ -0.71
SIPA1L3-201ENST00000222345 NPBQ8NG41 125 aa10.62□□□□□ -0.71
SIPA1L3-201ENST00000222345 Q96MF0 132 aa10.62□□□□□ -0.71
SIPA1L3-201ENST00000222345 I3L2K1 104 aa10.62□□□□□ -0.71
SIPA1L3-201ENST00000222345 J3QLI3 93 aa10.62□□□□□ -0.71
SIPA1L3-201ENST00000222345 LY6HO94772 140 aa10.62□□□□□ -0.71
SIPA1L3-201ENST00000222345 SPRY4Q9C004 299 aa10.62□□□□□ -0.71
SIPA1L3-201ENST00000222345 IGLV1-44P01699 117 aa10.61□□□□□ -0.71
SIPA1L3-201ENST00000222345 IGKV4-1P06312 121 aa10.61□□□□□ -0.71
SIPA1L3-201ENST00000222345 BPESC1Q9GZL8 116 aa10.61□□□□□ -0.71
SIPA1L3-201ENST00000222345 NOTCH4Q99466 2003 aa10.61□□□□□ -0.71
SIPA1L3-201ENST00000222345 NBASA2RRP1 2371 aa10.61□□□□□ -0.71
SIPA1L3-201ENST00000222345 TIRAPP58753 221 aa10.61□□□□□ -0.71
SIPA1L3-201ENST00000222345 NFE4Q86UQ8 179 aa10.61□□□□□ -0.71
SIPA1L3-201ENST00000222345 Q9HAA7 133 aa10.61□□□□□ -0.71
SIPA1L3-201ENST00000222345 IGKV2D-24A0A075B6R9 120 aa10.61□□□□□ -0.71
SIPA1L3-201ENST00000222345 RUSC1-AS1Q66K80 236 aa10.6□□□□□ -0.71
SIPA1L3-201ENST00000222345 FAM19A3Q7Z5A8 133 aa10.6□□□□□ -0.71
SIPA1L3-201ENST00000222345 LHBP01229 141 aa10.6□□□□□ -0.71
SIPA1L3-201ENST00000222345 YPEL4Q96NS1 127 aa10.6□□□□□ -0.71
SIPA1L3-201ENST00000222345 MSRB1Q9NZV6 116 aa10.6□□□□□ -0.71
SIPA1L3-201ENST00000222345 RSPO1Q2MKA7 263 aaPredicted RBP10.6□□□□□ -0.71
SIPA1L3-201ENST00000222345 CFAP126Q5VTH2 177 aa10.6□□□□□ -0.71
SIPA1L3-201ENST00000222345 IGLV3-9A0A075B6K5 115 aa10.59□□□□□ -0.71
SIPA1L3-201ENST00000222345 TP73-AS1Q9UF72 201 aa10.59□□□□□ -0.71
SIPA1L3-201ENST00000222345 H0Y9J4 135 aa10.59□□□□□ -0.71
SIPA1L3-201ENST00000222345 NCR3O14931 201 aa10.59□□□□□ -0.71
SIPA1L3-201ENST00000222345 LTBP1Q14766 1721 aa10.59□□□□□ -0.71
SIPA1L3-201ENST00000222345 PTPRBP23467 1997 aa10.59□□□□□ -0.71
SIPA1L3-201ENST00000222345 SEM1Q6ZVN7 128 aa10.59□□□□□ -0.71
SIPA1L3-201ENST00000222345 IGLV11-55A0A075B6I3 123 aa10.58□□□□□ -0.72
SIPA1L3-201ENST00000222345 Q6ZSR3 168 aa10.58□□□□□ -0.72
SIPA1L3-201ENST00000222345 K7EIM0 57 aa10.58□□□□□ -0.72
SIPA1L3-201ENST00000222345 CGB7P0DN87 165 aa10.58□□□□□ -0.72
SIPA1L3-201ENST00000222345 TRIAP1O43715 76 aa10.58□□□□□ -0.72
SIPA1L3-201ENST00000222345 NEXN-AS1Q8NBZ9 246 aa10.58□□□□□ -0.72
SIPA1L3-201ENST00000222345 C20orf203Q8NBC4 194 aa10.58□□□□□ -0.72
SIPA1L3-201ENST00000222345 CASC2Q6XLA1 102 aa10.57□□□□□ -0.72
SIPA1L3-201ENST00000222345 C11orf1Q9H5F2 150 aa10.57□□□□□ -0.72
SIPA1L3-201ENST00000222345 IGKV1-17P01599 117 aa10.57□□□□□ -0.72
SIPA1L3-201ENST00000222345 IGHV3-33P01772 117 aa10.56□□□□□ -0.72
SIPA1L3-201ENST00000222345 GYPEP15421 78 aa10.56□□□□□ -0.72
SIPA1L3-201ENST00000222345 PATE2Q6UY27 113 aa10.56□□□□□ -0.72
SIPA1L3-201ENST00000222345 LYPD6Q86Y78 171 aa10.56□□□□□ -0.72
SIPA1L3-201ENST00000222345 Q6ZQT7 251 aa10.56□□□□□ -0.72
SIPA1L3-201ENST00000222345 H7C423 109 aa10.56□□□□□ -0.72
SIPA1L3-201ENST00000222345 PMAIP1Q13794 54 aa10.56□□□□□ -0.72
SIPA1L3-201ENST00000222345 DKK4Q9UBT3 224 aa10.56□□□□□ -0.72
SIPA1L3-201ENST00000222345 KRTAP27-1Q3LI81 207 aa10.55□□□□□ -0.72
SIPA1L3-201ENST00000222345 TRBV10-1A0A0K0K1A3 114 aa10.55□□□□□ -0.72
SIPA1L3-201ENST00000222345 ARTNQ5T4W7 220 aa10.55□□□□□ -0.72
SIPA1L3-201ENST00000222345 IGKV1OR2-108A0A075B7D4 117 aa10.55□□□□□ -0.72
SIPA1L3-201ENST00000222345 A0A0J9YY99 117 aa10.55□□□□□ -0.72
SIPA1L3-201ENST00000222345 MRPS12O15235 138 aaKnown RBP10.55□□□□□ -0.72
SIPA1L3-201ENST00000222345 DSCAMO60469 2012 aa10.55□□□□□ -0.72
SIPA1L3-201ENST00000222345 U3KQK5 164 aa10.55□□□□□ -0.72
SIPA1L3-201ENST00000222345 XGP55808 180 aa10.54□□□□□ -0.72
SIPA1L3-201ENST00000222345 TMEM223A0PJW6 202 aa10.54□□□□□ -0.72
SIPA1L3-201ENST00000222345 HOXB4P17483 251 aaPredicted RBP10.54□□□□□ -0.72
SIPA1L3-201ENST00000222345 MLST8Q9BVC4 326 aa10.54□□□□□ -0.72
SIPA1L3-201ENST00000222345 C2orf91Q6ZV80 131 aa10.53□□□□□ -0.72
SIPA1L3-201ENST00000222345 TRAV7A0A075B6U4 112 aa10.53□□□□□ -0.72
SIPA1L3-201ENST00000222345 LINC00526Q96FQ7 95 aa10.53□□□□□ -0.72
SIPA1L3-201ENST00000222345 SPAG11BQ08648 103 aa10.53□□□□□ -0.72
SIPA1L3-201ENST00000222345 FAM222AQ5U5X8 452 aa10.53□□□□□ -0.72
SIPA1L3-201ENST00000222345 Q6JHZ5 121 aa10.53□□□□□ -0.72
SIPA1L3-201ENST00000222345 A0A096LPF7 62 aa10.52□□□□□ -0.73
SIPA1L3-201ENST00000222345 LST1O00453 97 aa10.52□□□□□ -0.73
SIPA1L3-201ENST00000222345 DIAPH2-AS1Q14236 149 aa10.52□□□□□ -0.73
SIPA1L3-201ENST00000222345 UFSP1Q6NVU6 142 aa10.52□□□□□ -0.73
SIPA1L3-201ENST00000222345 HRCT1Q6UXD1 115 aa10.52□□□□□ -0.73
SIPA1L3-201ENST00000222345 CTSGP08311 255 aa10.52□□□□□ -0.73
SIPA1L3-201ENST00000222345 LOXL1Q08397 574 aaPredicted RBP10.51□□□□□ -0.73
SIPA1L3-201ENST00000222345 FAM19A5Q7Z5A7 132 aaPredicted RBP10.51□□□□□ -0.73
SIPA1L3-201ENST00000222345 IBA57-AS1B1ANH7 110 aa10.51□□□□□ -0.73
SIPA1L3-201ENST00000222345 HHLA3Q9XRX5 114 aa10.51□□□□□ -0.73
SIPA1L3-201ENST00000222345 IGHV3-30P01768 117 aa10.51□□□□□ -0.73
SIPA1L3-201ENST00000222345 IGHV3-30-5P0DP03 117 aa10.51□□□□□ -0.73
SIPA1L3-201ENST00000222345 SNURFQ9Y675 71 aa10.51□□□□□ -0.73
SIPA1L3-201ENST00000222345 COL5A1P20908 1838 aaPredicted RBP10.51□□□□□ -0.73
SIPA1L3-201ENST00000222345 K7EMT4 169 aa10.51□□□□□ -0.73
SIPA1L3-201ENST00000222345 ZMAT4Q9H898 229 aa10.51□□□□□ -0.73
SIPA1L3-201ENST00000222345 LINC00308Q8TCZ7 52 aa10.5□□□□□ -0.73
SIPA1L3-201ENST00000222345 CSDC2Q9Y534 153 aaKnown RBP10.5□□□□□ -0.73
SIPA1L3-201ENST00000222345 J3QKU1 62 aa10.5□□□□□ -0.73
SIPA1L3-201ENST00000222345 MIFP14174 115 aa10.5□□□□□ -0.73
SIPA1L3-201ENST00000222345 FRMD6-AS1P0C7T7 363 aa10.5□□□□□ -0.73
SIPA1L3-201ENST00000222345 ODF3Q96PU9 254 aa10.5□□□□□ -0.73
SIPA1L3-201ENST00000222345 IGLV10-54A0A075B6I4 117 aa10.49□□□□□ -0.73
SIPA1L3-201ENST00000222345 IGHV4OR15-8A0A075B7B6 117 aa10.49□□□□□ -0.73
SIPA1L3-201ENST00000222345 A0A087WW49 117 aa10.49□□□□□ -0.73
SIPA1L3-201ENST00000222345 GDF5OSQ5U4N7 250 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms