RNA–Protein interactions for RNA: ENST00000222275.2

UPK1A-201, Transcript of uroplakin 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK1A, Length 1,223 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-201ENST00000222275 TRAV9-1A0A075B6T8 112 aa9.46□□□□□ -0.9
UPK1A-201ENST00000222275 C7orf77A4D0Y5 90 aa9.46□□□□□ -0.9
UPK1A-201ENST00000222275 RPL36AP83881 106 aaKnown RBP9.46□□□□□ -0.9
UPK1A-201ENST00000222275 UBE2DNLQ8IWF7 75 aa9.46□□□□□ -0.9
UPK1A-201ENST00000222275 RPL36ALQ969Q0 106 aaKnown RBP9.46□□□□□ -0.9
UPK1A-201ENST00000222275 BTF3L4Q96K17 158 aa9.46□□□□□ -0.9
UPK1A-201ENST00000222275 LRP1BQ9NZR2 4599 aa9.46□□□□□ -0.9
UPK1A-201ENST00000222275 LINC00315P59091 139 aa9.45□□□□□ -0.9
UPK1A-201ENST00000222275 HBBP68871 147 aa9.45□□□□□ -0.9
UPK1A-201ENST00000222275 SLC7A5P1Q8MH63 180 aa9.45□□□□□ -0.9
UPK1A-201ENST00000222275 DNAJC30Q96LL9 226 aa9.45□□□□□ -0.9
UPK1A-201ENST00000222275 RPS10P5Q9NQ39 176 aa9.45□□□□□ -0.9
UPK1A-201ENST00000222275 TRBV7-3A0A075B6L6 115 aa9.44□□□□□ -0.9
UPK1A-201ENST00000222275 M0R2N4 97 aa9.44□□□□□ -0.9
UPK1A-201ENST00000222275 Q6ZSN1 163 aa9.44□□□□□ -0.9
UPK1A-201ENST00000222275 RYR1P21817 5038 aa9.43□□□□□ -0.9
UPK1A-201ENST00000222275 RTL8CO15255 209 aa9.43□□□□□ -0.9
UPK1A-201ENST00000222275 PPP1R17O96001 155 aa9.43□□□□□ -0.9
UPK1A-201ENST00000222275 CAMPP49913 170 aa9.43□□□□□ -0.9
UPK1A-201ENST00000222275 TIRAPP58753 221 aa9.43□□□□□ -0.9
UPK1A-201ENST00000222275 SUMO4Q6EEV6 95 aa9.43□□□□□ -0.9
UPK1A-201ENST00000222275 RASL11AQ6T310 242 aa9.43□□□□□ -0.9
UPK1A-201ENST00000222275 ATP6V0E2Q8NHE4 81 aa9.43□□□□□ -0.9
UPK1A-201ENST00000222275 TNFRSF18Q9Y5U5 241 aa9.43□□□□□ -0.9
UPK1A-201ENST00000222275 A0A1B0GXF2 115 aa9.42□□□□□ -0.9
UPK1A-201ENST00000222275 GAGE12JA6NER3 117 aa9.42□□□□□ -0.9
UPK1A-201ENST00000222275 M0QY20 66 aa9.42□□□□□ -0.9
UPK1A-201ENST00000222275 GAGE1Q13065 139 aa9.42□□□□□ -0.9
UPK1A-201ENST00000222275 GAGE4Q13068 117 aa9.42□□□□□ -0.9
UPK1A-201ENST00000222275 GAGE5Q13069 117 aa9.42□□□□□ -0.9
UPK1A-201ENST00000222275 COX19Q49B96 90 aa9.42□□□□□ -0.9
UPK1A-201ENST00000222275 GAGE13Q4V321 117 aa9.42□□□□□ -0.9
UPK1A-201ENST00000222275 MRPL54Q6P161 138 aaKnown RBP9.42□□□□□ -0.9
UPK1A-201ENST00000222275 ZNRF2Q8NHG8 242 aa9.42□□□□□ -0.9
UPK1A-201ENST00000222275 MRAP2Q96G30 205 aa9.42□□□□□ -0.9
UPK1A-201ENST00000222275 NIT2Q9NQR4 276 aa9.42□□□□□ -0.9
UPK1A-201ENST00000222275 IGLV2-18A0A075B6J9 118 aa9.41□□□□□ -0.9
UPK1A-201ENST00000222275 LOC100131303A0A0U1RQF7 123 aa9.41□□□□□ -0.9
UPK1A-201ENST00000222275 ESRGQ1W209 222 aa9.41□□□□□ -0.9
UPK1A-201ENST00000222275 TMEM97Q5BJF2 176 aa9.41□□□□□ -0.9
UPK1A-201ENST00000222275 LYPD5Q6UWN5 251 aa9.41□□□□□ -0.9
UPK1A-201ENST00000222275 DAZ4Q86SG3 579 aaKnown RBP9.41□□□□□ -0.9
UPK1A-201ENST00000222275 GATD1Q8NB37 220 aa9.41□□□□□ -0.9
UPK1A-201ENST00000222275 GTSF1LQ9H1H1 148 aa9.41□□□□□ -0.9
UPK1A-201ENST00000222275 DAZ3Q9NR90 486 aaKnown RBP9.41□□□□□ -0.9
UPK1A-201ENST00000222275 DNAH5Q8TE73 4624 aa9.4□□□□□ -0.9
UPK1A-201ENST00000222275 A0A1B0GVY2 172 aa9.4□□□□□ -0.9
UPK1A-201ENST00000222275 LINC00694P0DN24 101 aa9.4□□□□□ -0.9
UPK1A-201ENST00000222275 RAB4AP20338 218 aa9.4□□□□□ -0.9
UPK1A-201ENST00000222275 UBE2D3P61077 147 aa9.4□□□□□ -0.9
UPK1A-201ENST00000222275 UBE2D2P62837 147 aa9.4□□□□□ -0.9
UPK1A-201ENST00000222275 FAM104BQ5XKR9 115 aa9.4□□□□□ -0.9
UPK1A-201ENST00000222275 Q6ZR54 194 aa9.4□□□□□ -0.9
UPK1A-201ENST00000222275 NEXN-AS1Q8NBZ9 246 aa9.4□□□□□ -0.9
UPK1A-201ENST00000222275 UPK3BQ9BT76 320 aa9.4□□□□□ -0.9
UPK1A-201ENST00000222275 MRPS16Q9Y3D3 137 aaKnown RBP9.4□□□□□ -0.9
UPK1A-201ENST00000222275 HSPG2P98160 4391 aa9.4□□□□□ -0.9
UPK1A-201ENST00000222275 TRAV8-6A0A0B4J262 113 aa9.39□□□□□ -0.91
UPK1A-201ENST00000222275 PPBPP02775 128 aa9.39□□□□□ -0.91
UPK1A-201ENST00000222275 AMN1Q8IY45 258 aa9.39□□□□□ -0.91
UPK1A-201ENST00000222275 KRTAP17-1Q9BYP8 105 aa9.39□□□□□ -0.91
UPK1A-201ENST00000222275 LINC00588Q9Y4M8 146 aa9.39□□□□□ -0.91
UPK1A-201ENST00000222275 RNF185Q96GF1 192 aa9.38□□□□□ -0.91
UPK1A-201ENST00000222275 CKS2P33552 79 aa9.37□□□□□ -0.91
UPK1A-201ENST00000222275 OR10J3Q5JRS4 329 aa9.37□□□□□ -0.91
UPK1A-201ENST00000222275 LELP1Q5T871 98 aa9.37□□□□□ -0.91
UPK1A-201ENST00000222275 URGCP-MRPS24S4R325 110 aa9.37□□□□□ -0.91
UPK1A-201ENST00000222275 PCLOQ9Y6V0 5065 aa9.36□□□□□ -0.91
UPK1A-201ENST00000222275 TRAV26-2A0A0B4J265 109 aa9.36□□□□□ -0.91
UPK1A-201ENST00000222275 TRBV6-5A0A0K0K1A5 114 aa9.36□□□□□ -0.91
UPK1A-201ENST00000222275 K7EP13 123 aa9.36□□□□□ -0.91
UPK1A-201ENST00000222275 MRPL51Q4U2R6 128 aaKnown RBP9.36□□□□□ -0.91
UPK1A-201ENST00000222275 ST20Q9HBF5 79 aa9.36□□□□□ -0.91
UPK1A-201ENST00000222275 APOBP04114 4563 aaKnown RBP9.36□□□□□ -0.91
UPK1A-201ENST00000222275 HLA-DQA1P01909 254 aa9.35□□□□□ -0.91
UPK1A-201ENST00000222275 MT-ND6P03923 174 aa9.35□□□□□ -0.91
UPK1A-201ENST00000222275 PKIAP61925 76 aa9.35□□□□□ -0.91
UPK1A-201ENST00000222275 ORMDL3Q8N138 153 aa9.35□□□□□ -0.91
UPK1A-201ENST00000222275 GNB1LQ9BYB4 327 aa9.35□□□□□ -0.91
UPK1A-201ENST00000222275 Q9H8V8 135 aa9.35□□□□□ -0.91
UPK1A-201ENST00000222275 SMCO4Q9NRQ5 59 aa9.35□□□□□ -0.91
UPK1A-201ENST00000222275 Q9UF83 564 aa9.35□□□□□ -0.91
UPK1A-201ENST00000222275 LAMTOR2Q9Y2Q5 125 aa9.35□□□□□ -0.91
UPK1A-201ENST00000222275 TRAV9-2A0A087WT02 112 aa9.34□□□□□ -0.91
UPK1A-201ENST00000222275 PHOX2AO14813 284 aa9.34□□□□□ -0.91
UPK1A-201ENST00000222275 SIVA1O15304 175 aa9.34□□□□□ -0.91
UPK1A-201ENST00000222275 TRBV24-1A0A075B6N3 115 aa9.33□□□□□ -0.92
UPK1A-201ENST00000222275 SDHAF1A6NFY7 115 aa9.33□□□□□ -0.92
UPK1A-201ENST00000222275 NCR2O95944 276 aa9.33□□□□□ -0.92
UPK1A-201ENST00000222275 COTL1Q14019 142 aa9.33□□□□□ -0.92
UPK1A-201ENST00000222275 TTC32Q5I0X7 151 aa9.33□□□□□ -0.92
UPK1A-201ENST00000222275 TMEM136Q6ZRR5 245 aa9.33□□□□□ -0.92
UPK1A-201ENST00000222275 RPL39LQ96EH5 51 aaKnown RBP9.33□□□□□ -0.92
UPK1A-201ENST00000222275 C20orf78Q9BR46 151 aa9.33□□□□□ -0.92
UPK1A-201ENST00000222275 TRBV25-1A0A075B6N4 114 aa9.32□□□□□ -0.92
UPK1A-201ENST00000222275 TRBV6-8A0A0A6YYG3 113 aa9.32□□□□□ -0.92
UPK1A-201ENST00000222275 PRSS29PA6NIE9 313 aa9.32□□□□□ -0.92
UPK1A-201ENST00000222275 D6R8Y8 96 aa9.32□□□□□ -0.92
UPK1A-201ENST00000222275 I3L3M4 83 aa9.32□□□□□ -0.92
UPK1A-201ENST00000222275 VCYO14598 125 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms