RNA–Protein interactions for RNA: ENST00000221573.10

SNAPC2-201, Transcript of small nuclear RNA activating complex polypeptide 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC2, Length 1,542 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC2-201ENST00000221573 ELOBQ15370 118 aa13.46□□□□□ -0.25
SNAPC2-201ENST00000221573 MRPL51Q4U2R6 128 aaKnown RBP13.46□□□□□ -0.25
SNAPC2-201ENST00000221573 RASL11AQ6T310 242 aa13.46□□□□□ -0.25
SNAPC2-201ENST00000221573 NEGR1Q7Z3B1 354 aa13.46□□□□□ -0.25
SNAPC2-201ENST00000221573 TGIF2-C20orf24A0A0A6YYL0 155 aa13.45□□□□□ -0.26
SNAPC2-201ENST00000221573 SMKR1H3BMG3 65 aa13.45□□□□□ -0.26
SNAPC2-201ENST00000221573 ATP6V1G1O75348 118 aa13.45□□□□□ -0.26
SNAPC2-201ENST00000221573 NCR2O95944 276 aa13.45□□□□□ -0.26
SNAPC2-201ENST00000221573 RPL36AP83881 106 aaKnown RBP13.45□□□□□ -0.26
SNAPC2-201ENST00000221573 RPL36ALQ969Q0 106 aaKnown RBP13.45□□□□□ -0.26
SNAPC2-201ENST00000221573 RPL39LQ96EH5 51 aaKnown RBP13.45□□□□□ -0.26
SNAPC2-201ENST00000221573 TRBV7-3A0A075B6L6 115 aa13.44□□□□□ -0.26
SNAPC2-201ENST00000221573 ESRGQ1W209 222 aa13.44□□□□□ -0.26
SNAPC2-201ENST00000221573 ALMS1Q8TCU4 4167 aa13.44□□□□□ -0.26
SNAPC2-201ENST00000221573 TMEM136Q6ZRR5 245 aa13.44□□□□□ -0.26
SNAPC2-201ENST00000221573 ATP6V0E2Q8NHE4 81 aa13.44□□□□□ -0.26
SNAPC2-201ENST00000221573 MRAP2Q96G30 205 aa13.44□□□□□ -0.26
SNAPC2-201ENST00000221573 NIT2Q9NQR4 276 aa13.44□□□□□ -0.26
SNAPC2-201ENST00000221573 RPS10P46783 165 aaKnown RBP13.43□□□□□ -0.26
SNAPC2-201ENST00000221573 UBE2D3P61077 147 aa13.43□□□□□ -0.26
SNAPC2-201ENST00000221573 UBE2D2P62837 147 aa13.43□□□□□ -0.26
SNAPC2-201ENST00000221573 YPEL4Q96NS1 127 aa13.43□□□□□ -0.26
SNAPC2-201ENST00000221573 LYPD5Q6UWN5 251 aa13.42□□□□□ -0.26
SNAPC2-201ENST00000221573 SH2D6Q7Z4S9 175 aa13.42□□□□□ -0.26
SNAPC2-201ENST00000221573 FRZBQ92765 325 aa13.42□□□□□ -0.26
SNAPC2-201ENST00000221573 DNAJC30Q96LL9 226 aa13.42□□□□□ -0.26
SNAPC2-201ENST00000221573 SMCO4Q9NRQ5 59 aa13.42□□□□□ -0.26
SNAPC2-201ENST00000221573 LINC00588Q9Y4M8 146 aa13.42□□□□□ -0.26
SNAPC2-201ENST00000221573 TNFRSF18Q9Y5U5 241 aa13.42□□□□□ -0.26
SNAPC2-201ENST00000221573 IGHV3-38A0A0C4DH36 116 aa13.41□□□□□ -0.26
SNAPC2-201ENST00000221573 LINC00476Q8WZB0 136 aa13.41□□□□□ -0.26
SNAPC2-201ENST00000221573 TRBV24-1A0A075B6N3 115 aa13.4□□□□□ -0.26
SNAPC2-201ENST00000221573 D6R8Y8 96 aa13.4□□□□□ -0.26
SNAPC2-201ENST00000221573 SCO1O75880 301 aa13.4□□□□□ -0.26
SNAPC2-201ENST00000221573 CCL18P55774 89 aa13.4□□□□□ -0.26
SNAPC2-201ENST00000221573 OR10J3Q5JRS4 329 aa13.4□□□□□ -0.26
SNAPC2-201ENST00000221573 UBE2DNLQ8IWF7 75 aa13.4□□□□□ -0.26
SNAPC2-201ENST00000221573 CKS2P33552 79 aa13.39□□□□□ -0.27
SNAPC2-201ENST00000221573 LGALS9CQ6DKI2 356 aa13.39□□□□□ -0.27
SNAPC2-201ENST00000221573 GTSF1LQ9H1H1 148 aa13.39□□□□□ -0.27
SNAPC2-201ENST00000221573 VPS13DQ5THJ4 4388 aa13.39□□□□□ -0.27
SNAPC2-201ENST00000221573 LY6G6CO95867 125 aa13.39□□□□□ -0.27
SNAPC2-201ENST00000221573 NRACQ8N912 160 aa13.39□□□□□ -0.27
SNAPC2-201ENST00000221573 GNB1LQ9BYB4 327 aa13.39□□□□□ -0.27
SNAPC2-201ENST00000221573 DNAH1Q9P2D7 4330 aa13.38□□□□□ -0.27
SNAPC2-201ENST00000221573 HLA-DQA1P01909 254 aa13.38□□□□□ -0.27
SNAPC2-201ENST00000221573 S100A1P23297 94 aa13.37□□□□□ -0.27
SNAPC2-201ENST00000221573 COX19Q49B96 90 aa13.37□□□□□ -0.27
SNAPC2-201ENST00000221573 MRPS16Q9Y3D3 137 aaKnown RBP13.37□□□□□ -0.27
SNAPC2-201ENST00000221573 TRBV6-5A0A0K0K1A5 114 aa13.36□□□□□ -0.27
SNAPC2-201ENST00000221573 SDHAF1A6NFY7 115 aa13.36□□□□□ -0.27
SNAPC2-201ENST00000221573 DEFB104AQ8WTQ1 72 aa13.36□□□□□ -0.27
SNAPC2-201ENST00000221573 NPYP01303 97 aa13.35□□□□□ -0.27
SNAPC2-201ENST00000221573 APCSP02743 223 aa13.35□□□□□ -0.27
SNAPC2-201ENST00000221573 TIRAPP58753 221 aa13.35□□□□□ -0.27
SNAPC2-201ENST00000221573 KIAA1644Q3SXP7 199 aa13.35□□□□□ -0.27
SNAPC2-201ENST00000221573 DAZ4Q86SG3 579 aaKnown RBP13.35□□□□□ -0.27
SNAPC2-201ENST00000221573 ORMDL3Q8N138 153 aa13.35□□□□□ -0.27
SNAPC2-201ENST00000221573 ST20Q9HBF5 79 aa13.35□□□□□ -0.27
SNAPC2-201ENST00000221573 DAZ3Q9NR90 486 aaKnown RBP13.35□□□□□ -0.27
SNAPC2-201ENST00000221573 TNFRSF6BO95407 300 aa13.34□□□□□ -0.27
SNAPC2-201ENST00000221573 PPBPP02775 128 aa13.34□□□□□ -0.27
SNAPC2-201ENST00000221573 MT-ND6P03923 174 aa13.34□□□□□ -0.27
SNAPC2-201ENST00000221573 PRELID3AQ96N28 172 aa13.34□□□□□ -0.27
SNAPC2-201ENST00000221573 MRPL18Q9H0U6 180 aaKnown RBP13.34□□□□□ -0.27
SNAPC2-201ENST00000221573 SACSQ9NZJ4 4579 aa13.34□□□□□ -0.27
SNAPC2-201ENST00000221573 LCE6AA0A183 80 aa13.34□□□□□ -0.27
SNAPC2-201ENST00000221573 LELP1Q5T871 98 aa13.34□□□□□ -0.27
SNAPC2-201ENST00000221573 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.34□□□□□ -0.27
SNAPC2-201ENST00000221573 TMEM70Q9BUB7 260 aa13.34□□□□□ -0.27
SNAPC2-201ENST00000221573 KMT2CQ8NEZ4 4911 aaKnown RBP13.34□□□□□ -0.27
SNAPC2-201ENST00000221573 PPP1R17O96001 155 aa13.33□□□□□ -0.28
SNAPC2-201ENST00000221573 SUMO2P61956 95 aaKnown RBP13.33□□□□□ -0.28
SNAPC2-201ENST00000221573 NTM-AS1Q6ZSK4 140 aa13.33□□□□□ -0.28
SNAPC2-201ENST00000221573 WFDC10BQ8IUB3 73 aa13.33□□□□□ -0.28
SNAPC2-201ENST00000221573 UPK3BQ9BT76 320 aa13.33□□□□□ -0.28
SNAPC2-201ENST00000221573 POLR2KP53803 58 aaKnown RBP13.32□□□□□ -0.28
SNAPC2-201ENST00000221573 TRAPPC1Q9Y5R8 145 aa13.32□□□□□ -0.28
SNAPC2-201ENST00000221573 FABP9Q0Z7S8 132 aa13.31□□□□□ -0.28
SNAPC2-201ENST00000221573 TRBV6-8A0A0A6YYG3 113 aa13.3□□□□□ -0.28
SNAPC2-201ENST00000221573 C20orf78Q9BR46 151 aa13.3□□□□□ -0.28
SNAPC2-201ENST00000221573 HYDINQ4G0P3 5121 aa13.3□□□□□ -0.28
SNAPC2-201ENST00000221573 COLCA2A8K830 154 aa13.29□□□□□ -0.28
SNAPC2-201ENST00000221573 PHOX2AO14813 284 aa13.29□□□□□ -0.28
SNAPC2-201ENST00000221573 KMT2AQ03164 3969 aa13.29□□□□□ -0.28
SNAPC2-201ENST00000221573 TRBV27A0A0K0K1C4 114 aa13.29□□□□□ -0.28
SNAPC2-201ENST00000221573 I3L3M4 83 aa13.29□□□□□ -0.28
SNAPC2-201ENST00000221573 PMCHP20382 165 aa13.29□□□□□ -0.28
SNAPC2-201ENST00000221573 COTL1Q14019 142 aa13.29□□□□□ -0.28
SNAPC2-201ENST00000221573 Q9H8V8 135 aa13.29□□□□□ -0.28
SNAPC2-201ENST00000221573 IGLV2-18A0A075B6J9 118 aa13.28□□□□□ -0.28
SNAPC2-201ENST00000221573 TRAV8-6A0A0B4J262 113 aa13.28□□□□□ -0.28
SNAPC2-201ENST00000221573 SIVA1O15304 175 aa13.28□□□□□ -0.28
SNAPC2-201ENST00000221573 TMEM97Q5BJF2 176 aa13.28□□□□□ -0.28
SNAPC2-201ENST00000221573 SMIM2Q9BVW6 85 aa13.28□□□□□ -0.28
SNAPC2-201ENST00000221573 LAMTOR2Q9Y2Q5 125 aa13.28□□□□□ -0.28
SNAPC2-201ENST00000221573 TSHBP01222 138 aa13.27□□□□□ -0.29
SNAPC2-201ENST00000221573 ALKBH7Q9BT30 221 aaPredicted RBP13.27□□□□□ -0.29
SNAPC2-201ENST00000221573 DNAH6Q9C0G6 4158 aa13.26□□□□□ -0.29
SNAPC2-201ENST00000221573 TRBV25-1A0A075B6N4 114 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms