RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 RASL11AQ6T310 242 aa14.04□□□□□ -0.16
RHBDD3-201ENST00000216085 URGCP-MRPS24S4R325 110 aa14.04□□□□□ -0.16
RHBDD3-201ENST00000216085 PLECQ15149 4684 aaKnown RBP14.03□□□□□ -0.16
RHBDD3-201ENST00000216085 TRBV7-3A0A075B6L6 115 aa14.02□□□□□ -0.16
RHBDD3-201ENST00000216085 M0QY20 66 aa14.02□□□□□ -0.16
RHBDD3-201ENST00000216085 DNAJC30Q96LL9 226 aa14.02□□□□□ -0.16
RHBDD3-201ENST00000216085 LGALS9CQ6DKI2 356 aa14.01□□□□□ -0.17
RHBDD3-201ENST00000216085 AMN1Q8IY45 258 aa14.01□□□□□ -0.17
RHBDD3-201ENST00000216085 MRAP2Q96G30 205 aa14.01□□□□□ -0.17
RHBDD3-201ENST00000216085 TNFRSF18Q9Y5U5 241 aa14.01□□□□□ -0.17
RHBDD3-201ENST00000216085 ATP6V0E2Q8NHE4 81 aa14.01□□□□□ -0.17
RHBDD3-201ENST00000216085 ZNRF2Q8NHG8 242 aa14.01□□□□□ -0.17
RHBDD3-201ENST00000216085 RAB4AP20338 218 aa14□□□□□ -0.17
RHBDD3-201ENST00000216085 FAM104BQ5XKR9 115 aa14□□□□□ -0.17
RHBDD3-201ENST00000216085 GATD1Q8NB37 220 aa14□□□□□ -0.17
RHBDD3-201ENST00000216085 NEXN-AS1Q8NBZ9 246 aa14□□□□□ -0.17
RHBDD3-201ENST00000216085 NIT2Q9NQR4 276 aa14□□□□□ -0.17
RHBDD3-201ENST00000216085 LINC00476Q8WZB0 136 aa13.99□□□□□ -0.17
RHBDD3-201ENST00000216085 YPEL4Q96NS1 127 aa13.99□□□□□ -0.17
RHBDD3-201ENST00000216085 TRAV26-2A0A0B4J265 109 aa13.99□□□□□ -0.17
RHBDD3-201ENST00000216085 LY6G6CO95867 125 aa13.99□□□□□ -0.17
RHBDD3-201ENST00000216085 PPP1R17O96001 155 aa13.99□□□□□ -0.17
RHBDD3-201ENST00000216085 LINC00694P0DN24 101 aa13.99□□□□□ -0.17
RHBDD3-201ENST00000216085 COX19Q49B96 90 aa13.99□□□□□ -0.17
RHBDD3-201ENST00000216085 ELOBQ15370 118 aa13.98□□□□□ -0.17
RHBDD3-201ENST00000216085 RNF185Q96GF1 192 aa13.98□□□□□ -0.17
RHBDD3-201ENST00000216085 UBE2D3P61077 147 aa13.97□□□□□ -0.17
RHBDD3-201ENST00000216085 UBE2D2P62837 147 aa13.97□□□□□ -0.17
RHBDD3-201ENST00000216085 GTSF1LQ9H1H1 148 aa13.97□□□□□ -0.17
RHBDD3-201ENST00000216085 TIRAPP58753 221 aa13.96□□□□□ -0.17
RHBDD3-201ENST00000216085 ESRGQ1W209 222 aa13.96□□□□□ -0.17
RHBDD3-201ENST00000216085 OR10J3Q5JRS4 329 aa13.96□□□□□ -0.17
RHBDD3-201ENST00000216085 LYPD5Q6UWN5 251 aa13.96□□□□□ -0.17
RHBDD3-201ENST00000216085 DAZ4Q86SG3 579 aaKnown RBP13.96□□□□□ -0.17
RHBDD3-201ENST00000216085 DAZ3Q9NR90 486 aaKnown RBP13.96□□□□□ -0.17
RHBDD3-201ENST00000216085 RAB5AP20339 215 aa13.96□□□□□ -0.18
RHBDD3-201ENST00000216085 Q9UF83 564 aa13.96□□□□□ -0.18
RHBDD3-201ENST00000216085 PPBPP02775 128 aa13.95□□□□□ -0.18
RHBDD3-201ENST00000216085 CKS2P33552 79 aa13.95□□□□□ -0.18
RHBDD3-201ENST00000216085 MRPL51Q4U2R6 128 aaKnown RBP13.95□□□□□ -0.18
RHBDD3-201ENST00000216085 MRPS16Q9Y3D3 137 aaKnown RBP13.95□□□□□ -0.18
RHBDD3-201ENST00000216085 TMEM97Q5BJF2 176 aa13.94□□□□□ -0.18
RHBDD3-201ENST00000216085 LINC00588Q9Y4M8 146 aa13.94□□□□□ -0.18
RHBDD3-201ENST00000216085 HLA-DQA1P01909 254 aa13.94□□□□□ -0.18
RHBDD3-201ENST00000216085 LCE6AA0A183 80 aa13.93□□□□□ -0.18
RHBDD3-201ENST00000216085 MT-ND6P03923 174 aa13.93□□□□□ -0.18
RHBDD3-201ENST00000216085 RPL39LQ96EH5 51 aaKnown RBP13.93□□□□□ -0.18
RHBDD3-201ENST00000216085 TRBV24-1A0A075B6N3 115 aa13.92□□□□□ -0.18
RHBDD3-201ENST00000216085 NCR2O95944 276 aa13.92□□□□□ -0.18
RHBDD3-201ENST00000216085 ORMDL3Q8N138 153 aa13.92□□□□□ -0.18
RHBDD3-201ENST00000216085 UPK3BQ9BT76 320 aa13.92□□□□□ -0.18
RHBDD3-201ENST00000216085 GNB1LQ9BYB4 327 aa13.92□□□□□ -0.18
RHBDD3-201ENST00000216085 ST20Q9HBF5 79 aa13.92□□□□□ -0.18
RHBDD3-201ENST00000216085 ALMS1Q8TCU4 4167 aa13.92□□□□□ -0.18
RHBDD3-201ENST00000216085 TRAV8-6A0A0B4J262 113 aa13.91□□□□□ -0.18
RHBDD3-201ENST00000216085 TRBV6-5A0A0K0K1A5 114 aa13.91□□□□□ -0.18
RHBDD3-201ENST00000216085 C1orf196B1AJZ1 125 aa13.91□□□□□ -0.18
RHBDD3-201ENST00000216085 LELP1Q5T871 98 aa13.91□□□□□ -0.18
RHBDD3-201ENST00000216085 TMEM136Q6ZRR5 245 aa13.91□□□□□ -0.18
RHBDD3-201ENST00000216085 TGIF2-C20orf24A0A0A6YYL0 155 aa13.91□□□□□ -0.18
RHBDD3-201ENST00000216085 D6R8Y8 96 aa13.91□□□□□ -0.18
RHBDD3-201ENST00000216085 RAB5BP61020 215 aa13.91□□□□□ -0.18
RHBDD3-201ENST00000216085 LYSTQ99698 3801 aa13.91□□□□□ -0.18
RHBDD3-201ENST00000216085 IGHV3-38A0A0C4DH36 116 aa13.9□□□□□ -0.18
RHBDD3-201ENST00000216085 SMKR1H3BMG3 65 aa13.9□□□□□ -0.18
RHBDD3-201ENST00000216085 SDHAF1A6NFY7 115 aa13.89□□□□□ -0.19
RHBDD3-201ENST00000216085 PHOX2AO14813 284 aa13.88□□□□□ -0.19
RHBDD3-201ENST00000216085 APCSP02743 223 aa13.88□□□□□ -0.19
RHBDD3-201ENST00000216085 RPS10P46783 165 aaKnown RBP13.88□□□□□ -0.19
RHBDD3-201ENST00000216085 LAMTOR2Q9Y2Q5 125 aa13.88□□□□□ -0.19
RHBDD3-201ENST00000216085 COTL1Q14019 142 aa13.88□□□□□ -0.19
RHBDD3-201ENST00000216085 GAS8-AS1O95177 125 aa13.87□□□□□ -0.19
RHBDD3-201ENST00000216085 SUMO2P61956 95 aaKnown RBP13.87□□□□□ -0.19
RHBDD3-201ENST00000216085 NRACQ8N912 160 aa13.87□□□□□ -0.19
RHBDD3-201ENST00000216085 PRELID3AQ96N28 172 aa13.87□□□□□ -0.19
RHBDD3-201ENST00000216085 C20orf78Q9BR46 151 aa13.87□□□□□ -0.19
RHBDD3-201ENST00000216085 TRBV6-8A0A0A6YYG3 113 aa13.86□□□□□ -0.19
RHBDD3-201ENST00000216085 SIVA1O15304 175 aa13.86□□□□□ -0.19
RHBDD3-201ENST00000216085 TNFRSF6BO95407 300 aa13.86□□□□□ -0.19
RHBDD3-201ENST00000216085 PMCHP20382 165 aa13.86□□□□□ -0.19
RHBDD3-201ENST00000216085 TMEM70Q9BUB7 260 aa13.86□□□□□ -0.19
RHBDD3-201ENST00000216085 Q9H8V8 135 aa13.86□□□□□ -0.19
RHBDD3-201ENST00000216085 TRBV25-1A0A075B6N4 114 aa13.86□□□□□ -0.19
RHBDD3-201ENST00000216085 I3L3M4 83 aa13.86□□□□□ -0.19
RHBDD3-201ENST00000216085 MRPL18Q9H0U6 180 aaKnown RBP13.85□□□□□ -0.19
RHBDD3-201ENST00000216085 IGHV1-24A0A0C4DH33 117 aa13.84□□□□□ -0.19
RHBDD3-201ENST00000216085 VCYO14598 125 aa13.84□□□□□ -0.19
RHBDD3-201ENST00000216085 PKIAP61925 76 aa13.84□□□□□ -0.19
RHBDD3-201ENST00000216085 TRAPPC1Q9Y5R8 145 aa13.84□□□□□ -0.19
RHBDD3-201ENST00000216085 FABP9Q0Z7S8 132 aa13.83□□□□□ -0.19
RHBDD3-201ENST00000216085 KIR2DL4Q99706 377 aa13.83□□□□□ -0.19
RHBDD3-201ENST00000216085 DNAH1Q9P2D7 4330 aa13.83□□□□□ -0.2
RHBDD3-201ENST00000216085 TRBV27A0A0K0K1C4 114 aa13.83□□□□□ -0.2
RHBDD3-201ENST00000216085 NPYP01303 97 aa13.83□□□□□ -0.2
RHBDD3-201ENST00000216085 POLR2KP53803 58 aaKnown RBP13.83□□□□□ -0.2
RHBDD3-201ENST00000216085 TTC32Q5I0X7 151 aa13.83□□□□□ -0.2
RHBDD3-201ENST00000216085 WFDC10BQ8IUB3 73 aa13.83□□□□□ -0.2
RHBDD3-201ENST00000216085 MAP1LC3AQ9H492 121 aa13.83□□□□□ -0.2
RHBDD3-201ENST00000216085 VPS13DQ5THJ4 4388 aa13.82□□□□□ -0.2
RHBDD3-201ENST00000216085 TCAPO15273 167 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms