RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 GATA3P23771 443 aa11.26□□□□□ -0.61
EFNB1-201ENST00000204961 PLNP26678 52 aa11.26□□□□□ -0.61
EFNB1-201ENST00000204961 SLURP1P55000 103 aa11.26□□□□□ -0.61
EFNB1-201ENST00000204961 RRN3P1Q2M238 152 aa11.26□□□□□ -0.61
EFNB1-201ENST00000204961 ZMAT4Q9H898 229 aa11.26□□□□□ -0.61
EFNB1-201ENST00000204961 IGHG2P01859 326 aa11.26□□□□□ -0.61
EFNB1-201ENST00000204961 Q1RN00 199 aa11.26□□□□□ -0.61
EFNB1-201ENST00000204961 APRG1Q8IVJ8 170 aa11.26□□□□□ -0.61
EFNB1-201ENST00000204961 SVIPQ8NHG7 77 aa11.26□□□□□ -0.61
EFNB1-201ENST00000204961 PSMG3-AS1Q96PY0 264 aa11.25□□□□□ -0.61
EFNB1-201ENST00000204961 TM2D2Q9BX73 214 aa11.25□□□□□ -0.61
EFNB1-201ENST00000204961 HIGD1BQ9P298 99 aa11.25□□□□□ -0.61
EFNB1-201ENST00000204961 MRAP2Q96G30 205 aa11.25□□□□□ -0.61
EFNB1-201ENST00000204961 GEMIN7Q9H840 131 aaKnown RBP11.25□□□□□ -0.61
EFNB1-201ENST00000204961 SPINK8P0C7L1 97 aa11.25□□□□□ -0.61
EFNB1-201ENST00000204961 TSPEAR-AS2P59090 65 aa11.25□□□□□ -0.61
EFNB1-201ENST00000204961 DEFB131AP59861 70 aa11.25□□□□□ -0.61
EFNB1-201ENST00000204961 NEXN-AS1Q8NBZ9 246 aa11.25□□□□□ -0.61
EFNB1-201ENST00000204961 IGHV4OR15-8A0A075B7B6 117 aa11.24□□□□□ -0.61
EFNB1-201ENST00000204961 A0A087WW49 117 aa11.24□□□□□ -0.61
EFNB1-201ENST00000204961 HIST2H2BCQ6DN03 193 aa11.24□□□□□ -0.61
EFNB1-201ENST00000204961 A0A0J9YXV3 536 aa11.24□□□□□ -0.61
EFNB1-201ENST00000204961 TSHBP01222 138 aa11.24□□□□□ -0.61
EFNB1-201ENST00000204961 MT-ATP8P03928 68 aa11.24□□□□□ -0.61
EFNB1-201ENST00000204961 ID1P41134 155 aa11.24□□□□□ -0.61
EFNB1-201ENST00000204961 TOMM6Q96B49 74 aa11.24□□□□□ -0.61
EFNB1-201ENST00000204961 ZNF469Q96JG9 3925 aaPredicted RBP11.24□□□□□ -0.61
EFNB1-201ENST00000204961 ZNF625Q96I27 306 aaPredicted RBP11.24□□□□□ -0.61
EFNB1-201ENST00000204961 UBE2E2Q96LR5 201 aa11.24□□□□□ -0.61
EFNB1-201ENST00000204961 SOCS3O14543 225 aa11.23□□□□□ -0.61
EFNB1-201ENST00000204961 IGHV3-53P01767 116 aa11.23□□□□□ -0.61
EFNB1-201ENST00000204961 APCP25054 2843 aa11.23□□□□□ -0.61
EFNB1-201ENST00000204961 A6NDX4 124 aa11.23□□□□□ -0.61
EFNB1-201ENST00000204961 CRYGDP07320 174 aa11.22□□□□□ -0.61
EFNB1-201ENST00000204961 SETXQ7Z333 2677 aaKnown RBP11.22□□□□□ -0.61
EFNB1-201ENST00000204961 TRAV8-3A0A0A6YYJ7 113 aa11.22□□□□□ -0.61
EFNB1-201ENST00000204961 DAND5Q8N907 189 aa11.22□□□□□ -0.61
EFNB1-201ENST00000204961 ZNRF2Q8NHG8 242 aa11.22□□□□□ -0.61
EFNB1-201ENST00000204961 KRTAP10-9P60411 292 aa11.22□□□□□ -0.61
EFNB1-201ENST00000204961 SNRPD3P62318 126 aaKnown RBP11.22□□□□□ -0.61
EFNB1-201ENST00000204961 NBPF19A0A087WUL8 3843 aa11.21□□□□□ -0.61
EFNB1-201ENST00000204961 USMG5Q96IX5 58 aa11.21□□□□□ -0.61
EFNB1-201ENST00000204961 IGKV3OR2-268A0A0C4DH90 116 aa11.2□□□□□ -0.62
EFNB1-201ENST00000204961 NFE4Q86UQ8 179 aa11.2□□□□□ -0.62
EFNB1-201ENST00000204961 LGALS3P17931 250 aaKnown RBP11.2□□□□□ -0.62
EFNB1-201ENST00000204961 HOXD3P31249 432 aaPredicted RBP11.2□□□□□ -0.62
EFNB1-201ENST00000204961 TCTEX1D4Q5JR98 221 aa11.2□□□□□ -0.62
EFNB1-201ENST00000204961 DCANP1Q8TF63 244 aa11.2□□□□□ -0.62
EFNB1-201ENST00000204961 HELZ2Q9BYK8 2649 aaKnown RBP11.2□□□□□ -0.62
EFNB1-201ENST00000204961 MORN3Q6PF18 240 aaPredicted RBP11.2□□□□□ -0.62
EFNB1-201ENST00000204961 Q6ZSV7 163 aa11.2□□□□□ -0.62
EFNB1-201ENST00000204961 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.19□□□□□ -0.62
EFNB1-201ENST00000204961 IGKV2-29A2NJV5 120 aaPredicted RBP11.19□□□□□ -0.62
EFNB1-201ENST00000204961 B4DSR2 109 aa11.19□□□□□ -0.62
EFNB1-201ENST00000204961 FOXI1Q12951 378 aa11.19□□□□□ -0.62
EFNB1-201ENST00000204961 VCYO14598 125 aa11.19□□□□□ -0.62
EFNB1-201ENST00000204961 SRSF2Q01130 221 aaKnown RBP11.19□□□□□ -0.62
EFNB1-201ENST00000204961 XCL2Q9UBD3 114 aa11.19□□□□□ -0.62
EFNB1-201ENST00000204961 TRBV7-3A0A075B6L6 115 aa11.18□□□□□ -0.62
EFNB1-201ENST00000204961 SPATA25Q9BR10 227 aa11.18□□□□□ -0.62
EFNB1-201ENST00000204961 SMCPP49901 116 aaPredicted RBP11.18□□□□□ -0.62
EFNB1-201ENST00000204961 LINC00315P59091 139 aa11.18□□□□□ -0.62
EFNB1-201ENST00000204961 PMVKQ15126 192 aa11.18□□□□□ -0.62
EFNB1-201ENST00000204961 DLX4Q92988 240 aaPredicted RBP11.18□□□□□ -0.62
EFNB1-201ENST00000204961 MRPL53Q96EL3 112 aaKnown RBP11.18□□□□□ -0.62
EFNB1-201ENST00000204961 PRO0461Q9UI25 63 aa11.17□□□□□ -0.62
EFNB1-201ENST00000204961 XGP55808 180 aa11.17□□□□□ -0.62
EFNB1-201ENST00000204961 HERVK_113P61574 105 aa11.17□□□□□ -0.62
EFNB1-201ENST00000204961 CFHR3Q02985 330 aa11.17□□□□□ -0.62
EFNB1-201ENST00000204961 FHL3Q13643 280 aa11.17□□□□□ -0.62
EFNB1-201ENST00000204961 TRPT1Q86TN4 253 aaKnown RBP11.17□□□□□ -0.62
EFNB1-201ENST00000204961 VCX2Q9H322 139 aa11.17□□□□□ -0.62
EFNB1-201ENST00000204961 IGLV4-69A0A075B6H9 119 aa11.16□□□□□ -0.62
EFNB1-201ENST00000204961 IGHV1OR15-1A0A075B7D0 117 aa11.16□□□□□ -0.62
EFNB1-201ENST00000204961 RBMY1A1P0DJD3 496 aaKnown RBP11.16□□□□□ -0.62
EFNB1-201ENST00000204961 RBMY1CP0DJD4 496 aa11.16□□□□□ -0.62
EFNB1-201ENST00000204961 CD28P10747 220 aa11.16□□□□□ -0.62
EFNB1-201ENST00000204961 RBMY1FQ15415 496 aaKnown RBP11.16□□□□□ -0.62
EFNB1-201ENST00000204961 LINC01587Q99440 93 aa11.16□□□□□ -0.62
EFNB1-201ENST00000204961 J3QQQ9 107 aa11.15□□□□□ -0.62
EFNB1-201ENST00000204961 TSPAN13O95857 204 aa11.15□□□□□ -0.62
EFNB1-201ENST00000204961 C19orf54Q5BKX5 351 aa11.15□□□□□ -0.62
EFNB1-201ENST00000204961 RNF183Q96D59 192 aa11.15□□□□□ -0.62
EFNB1-201ENST00000204961 C1QTNF4Q9BXJ3 329 aa11.15□□□□□ -0.62
EFNB1-201ENST00000204961 IGHV4-4A0A075B6R2 117 aa11.15□□□□□ -0.62
EFNB1-201ENST00000204961 A0A0J9YX75 114 aa11.15□□□□□ -0.62
EFNB1-201ENST00000204961 KIF25-AS1Q9Y6Z4 181 aa11.15□□□□□ -0.62
EFNB1-201ENST00000204961 A4D1N5 150 aa11.14□□□□□ -0.63
EFNB1-201ENST00000204961 SCGB1A1P11684 91 aa11.14□□□□□ -0.63
EFNB1-201ENST00000204961 C3orf56Q8N813 242 aa11.14□□□□□ -0.63
EFNB1-201ENST00000204961 CRIP2P52943 208 aaPredicted RBP11.14□□□□□ -0.63
EFNB1-201ENST00000204961 AKAP9Q99996 3911 aa11.14□□□□□ -0.63
EFNB1-201ENST00000204961 IGLV1-40P01703 118 aa11.14□□□□□ -0.63
EFNB1-201ENST00000204961 Q6ZSN1 163 aa11.14□□□□□ -0.63
EFNB1-201ENST00000204961 CDIP1Q9H305 208 aa11.14□□□□□ -0.63
EFNB1-201ENST00000204961 KLLNB2CW77 178 aa11.13□□□□□ -0.63
EFNB1-201ENST00000204961 POLR2KP53803 58 aaKnown RBP11.13□□□□□ -0.63
EFNB1-201ENST00000204961 UBR5O95071 2799 aaPredicted RBP11.13□□□□□ -0.63
EFNB1-201ENST00000204961 A0A0J9YY99 117 aa11.13□□□□□ -0.63
EFNB1-201ENST00000204961 IGIPA6NJ69 53 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms