RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Tmem225Q9D9S2 230 aa10.53□□□□□ -0.72
Nup88-203ENSMUST00000108531 NacaP70670 2187 aaKnown RBP10.53□□□□□ -0.72
Nup88-203ENSMUST00000108531 Med12lQ8BQM9 2157 aa10.53□□□□□ -0.72
Nup88-203ENSMUST00000108531 Trbv19A0A0B4J1H4 117 aa10.52□□□□□ -0.72
Nup88-203ENSMUST00000108531 Olfr1189A2AV11 306 aa10.52□□□□□ -0.72
Nup88-203ENSMUST00000108531 Gm9376G3UW68 176 aa10.52□□□□□ -0.72
Nup88-203ENSMUST00000108531 Lgals1P16045 135 aaKnown RBP10.52□□□□□ -0.72
Nup88-203ENSMUST00000108531 MymxQ2Q5T5 84 aa10.52□□□□□ -0.72
Nup88-203ENSMUST00000108531 B230104I21RikQ3USW4 141 aa10.52□□□□□ -0.72
Nup88-203ENSMUST00000108531 Fbxl7Q5BJ29 491 aa10.52□□□□□ -0.72
Nup88-203ENSMUST00000108531 Znf329Q6GQR8 522 aa10.52□□□□□ -0.72
Nup88-203ENSMUST00000108531 SriQ6P069 198 aa10.52□□□□□ -0.72
Nup88-203ENSMUST00000108531 Olfr965Q7TRA7 312 aa10.52□□□□□ -0.72
Nup88-203ENSMUST00000108531 Zfp874aQ8BX23 447 aa10.52□□□□□ -0.72
Nup88-203ENSMUST00000108531 Cisd1Q91WS0 108 aaKnown RBP10.52□□□□□ -0.72
Nup88-203ENSMUST00000108531 Pam16Q9CQV1 125 aa10.52□□□□□ -0.72
Nup88-203ENSMUST00000108531 CcsQ9WU84 274 aa10.52□□□□□ -0.72
Nup88-203ENSMUST00000108531 Timm10bQ9WV96 100 aa10.52□□□□□ -0.72
Nup88-203ENSMUST00000108531 Celsr3Q91ZI0 3301 aa10.52□□□□□ -0.72
Nup88-203ENSMUST00000108531 Igkv1-131A0A140T8M8 120 aa10.52□□□□□ -0.73
Nup88-203ENSMUST00000108531 Gm6993A0A1W2P738 69 aa10.52□□□□□ -0.73
Nup88-203ENSMUST00000108531 Gm21775J3KMK6 180 aa10.52□□□□□ -0.73
Nup88-203ENSMUST00000108531 P01806 116 aa10.52□□□□□ -0.73
Nup88-203ENSMUST00000108531 Lyz1P17897 148 aa10.52□□□□□ -0.73
Nup88-203ENSMUST00000108531 Sumo1P63166 101 aaKnown RBP10.52□□□□□ -0.73
Nup88-203ENSMUST00000108531 KhkP97328 298 aa10.52□□□□□ -0.73
Nup88-203ENSMUST00000108531 Znf260Q62513 407 aa10.52□□□□□ -0.73
Nup88-203ENSMUST00000108531 Vstm2aQ8R0A6 236 aa10.52□□□□□ -0.73
Nup88-203ENSMUST00000108531 Mien1Q9CQ86 115 aa10.52□□□□□ -0.73
Nup88-203ENSMUST00000108531 Ssbp2Q9CYZ8 361 aa10.52□□□□□ -0.73
Nup88-203ENSMUST00000108531 Col6a3E9PWQ3 3284 aa10.52□□□□□ -0.73
Nup88-203ENSMUST00000108531 Awat1A2ADU9 328 aa10.51□□□□□ -0.73
Nup88-203ENSMUST00000108531 Ccl17F6R5P4 103 aa10.51□□□□□ -0.73
Nup88-203ENSMUST00000108531 Sox15P43267 231 aa10.51□□□□□ -0.73
Nup88-203ENSMUST00000108531 GchfrP99025 84 aa10.51□□□□□ -0.73
Nup88-203ENSMUST00000108531 Q3U1D9 316 aa10.51□□□□□ -0.73
Nup88-203ENSMUST00000108531 Nanos1Q80WY3 267 aa10.51□□□□□ -0.73
Nup88-203ENSMUST00000108531 Slc36a4Q8CH36 500 aa10.51□□□□□ -0.73
Nup88-203ENSMUST00000108531 Ceacam11Q9D0Z8 303 aa10.51□□□□□ -0.73
Nup88-203ENSMUST00000108531 TslpQ9JIE6 140 aa10.51□□□□□ -0.73
Nup88-203ENSMUST00000108531 Zfp980A2A9J5 645 aa10.51□□□□□ -0.73
Nup88-203ENSMUST00000108531 Vmn1r224E9PWK2 298 aa10.51□□□□□ -0.73
Nup88-203ENSMUST00000108531 Pcgf2P23798 342 aaKnown RBP10.51□□□□□ -0.73
Nup88-203ENSMUST00000108531 Twist1P26687 206 aa10.51□□□□□ -0.73
Nup88-203ENSMUST00000108531 F7P70375 446 aa10.51□□□□□ -0.73
Nup88-203ENSMUST00000108531 Olfr33Q8VGX7 318 aa10.51□□□□□ -0.73
Nup88-203ENSMUST00000108531 Psmg3Q9CZH3 122 aa10.51□□□□□ -0.73
Nup88-203ENSMUST00000108531 Olfr978E9Q985 311 aa10.5□□□□□ -0.73
Nup88-203ENSMUST00000108531 P01787 123 aa10.5□□□□□ -0.73
Nup88-203ENSMUST00000108531 Ube2l3P68037 154 aaKnown RBP10.5□□□□□ -0.73
Nup88-203ENSMUST00000108531 Jpt2Q6PGH2 190 aaKnown RBP10.5□□□□□ -0.73
Nup88-203ENSMUST00000108531 Cbln4Q8BME9 198 aa10.5□□□□□ -0.73
Nup88-203ENSMUST00000108531 AmtnQ9D3J8 213 aa10.5□□□□□ -0.73
Nup88-203ENSMUST00000108531 Celsr1O35161 3034 aa10.5□□□□□ -0.73
Nup88-203ENSMUST00000108531 TracA0A075B662 137 aa10.5□□□□□ -0.73
Nup88-203ENSMUST00000108531 Tmem139E9PX92 214 aa10.5□□□□□ -0.73
Nup88-203ENSMUST00000108531 Gm21974F6W3F3 119 aa10.5□□□□□ -0.73
Nup88-203ENSMUST00000108531 Hoxa1P09022 331 aa10.5□□□□□ -0.73
Nup88-203ENSMUST00000108531 Hoxb4P10284 250 aa10.5□□□□□ -0.73
Nup88-203ENSMUST00000108531 P18530 117 aa10.5□□□□□ -0.73
Nup88-203ENSMUST00000108531 Bex6Q3TZW7 114 aa10.5□□□□□ -0.73
Nup88-203ENSMUST00000108531 Cd200r3Q5UKY4 296 aa10.5□□□□□ -0.73
Nup88-203ENSMUST00000108531 Olfr1453Q8VFX0 307 aa10.5□□□□□ -0.73
Nup88-203ENSMUST00000108531 Gpr87Q99MT7 358 aa10.5□□□□□ -0.73
Nup88-203ENSMUST00000108531 Dram1Q9DC58 238 aa10.5□□□□□ -0.73
Nup88-203ENSMUST00000108531 Wdfy4E9Q2M9 3149 aa10.49□□□□□ -0.73
Nup88-203ENSMUST00000108531 Olfr1245A0A1L1SQJ6 307 aa10.49□□□□□ -0.73
Nup88-203ENSMUST00000108531 Spint5J3KMK8 105 aa10.49□□□□□ -0.73
Nup88-203ENSMUST00000108531 Tnfaip6O08859 275 aa10.49□□□□□ -0.73
Nup88-203ENSMUST00000108531 Rab33bO35963 229 aa10.49□□□□□ -0.73
Nup88-203ENSMUST00000108531 Ms4a13Q5FWC3 203 aa10.49□□□□□ -0.73
Nup88-203ENSMUST00000108531 Ccl12Q62401 104 aa10.49□□□□□ -0.73
Nup88-203ENSMUST00000108531 Tas2r114Q7M722 309 aa10.49□□□□□ -0.73
Nup88-203ENSMUST00000108531 Olfr266Q8VFC3 316 aa10.49□□□□□ -0.73
Nup88-203ENSMUST00000108531 Rnf2Q9CQJ4 336 aa10.49□□□□□ -0.73
Nup88-203ENSMUST00000108531 PigpQ9JHG1 132 aa10.49□□□□□ -0.73
Nup88-203ENSMUST00000108531 Crybb1Q9WVJ5 250 aa10.49□□□□□ -0.73
Nup88-203ENSMUST00000108531 Frem1Q684R7 2191 aa10.49□□□□□ -0.73
Nup88-203ENSMUST00000108531 Ighv1-39A0A075B5V5 117 aa10.49□□□□□ -0.73
Nup88-203ENSMUST00000108531 Gm21913J3KML9 361 aa10.49□□□□□ -0.73
Nup88-203ENSMUST00000108531 Gm21776J3QPJ5 361 aa10.49□□□□□ -0.73
Nup88-203ENSMUST00000108531 F2rl2O08675 369 aa10.49□□□□□ -0.73
Nup88-203ENSMUST00000108531 PigyP0C1P0 71 aa10.49□□□□□ -0.73
Nup88-203ENSMUST00000108531 PpoxP51175 477 aa10.49□□□□□ -0.73
Nup88-203ENSMUST00000108531 Olfr859Q7TRF5 309 aa10.49□□□□□ -0.73
Nup88-203ENSMUST00000108531 Ifna14Q810G3 189 aa10.49□□□□□ -0.73
Nup88-203ENSMUST00000108531 Gm5148Q8BGG2 154 aa10.49□□□□□ -0.73
Nup88-203ENSMUST00000108531 Nrn1Q8CFV4 142 aa10.49□□□□□ -0.73
Nup88-203ENSMUST00000108531 Trib1Q8K4K4 372 aa10.49□□□□□ -0.73
Nup88-203ENSMUST00000108531 Olfr476Q8VGI4 310 aa10.49□□□□□ -0.73
Nup88-203ENSMUST00000108531 4930583I09RikQ9D2E3 102 aa10.49□□□□□ -0.73
Nup88-203ENSMUST00000108531 Vmn1r50Q9EP51 310 aa10.49□□□□□ -0.73
Nup88-203ENSMUST00000108531 Arfgef3Q3UGY8 2170 aa10.49□□□□□ -0.73
Nup88-203ENSMUST00000108531 Olfr1369-ps1A0A140T8K7 317 aa10.48□□□□□ -0.73
Nup88-203ENSMUST00000108531 Zfp930A0A1D5RM15 441 aa10.48□□□□□ -0.73
Nup88-203ENSMUST00000108531 Olfr898L7N1Z5 316 aa10.48□□□□□ -0.73
Nup88-203ENSMUST00000108531 Ccl2P10148 148 aa10.48□□□□□ -0.73
Nup88-203ENSMUST00000108531 Cd79bP15530 228 aa10.48□□□□□ -0.73
Nup88-203ENSMUST00000108531 Wt1P22561 449 aa10.48□□□□□ -0.73
Nup88-203ENSMUST00000108531 Olfr15P23275 312 aa10.48□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 23.5 ms