RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Psmb6Q60692 238 aa11.84□□□□□ -0.51
Nup88-202ENSMUST00000108530 Gm20854Q62461 227 aa11.84□□□□□ -0.51
Nup88-202ENSMUST00000108530 Srsf1Q6PDM2 248 aaKnown RBP11.84□□□□□ -0.51
Nup88-202ENSMUST00000108530 GaptQ8CB93 157 aa11.84□□□□□ -0.51
Nup88-202ENSMUST00000108530 Cdc34Q8CFI2 235 aa11.84□□□□□ -0.51
Nup88-202ENSMUST00000108530 Olfr1102Q8VES2 324 aa11.84□□□□□ -0.51
Nup88-202ENSMUST00000108530 Olfr1412Q8VET3 321 aa11.84□□□□□ -0.51
Nup88-202ENSMUST00000108530 Ms4a6dQ99N07 247 aa11.84□□□□□ -0.51
Nup88-202ENSMUST00000108530 Usp9xP70398 2559 aaKnown RBP11.84□□□□□ -0.51
Nup88-202ENSMUST00000108530 Ighv1-67A0A0G2JFN9 117 aa11.84□□□□□ -0.51
Nup88-202ENSMUST00000108530 Csn2P10598 231 aa11.84□□□□□ -0.51
Nup88-202ENSMUST00000108530 Hes1P35428 282 aa11.84□□□□□ -0.51
Nup88-202ENSMUST00000108530 Spsb3Q571F5 354 aa11.84□□□□□ -0.51
Nup88-202ENSMUST00000108530 AgaQ64191 346 aa11.84□□□□□ -0.51
Nup88-202ENSMUST00000108530 Ypel4Q65Z93 127 aa11.84□□□□□ -0.51
Nup88-202ENSMUST00000108530 Olfr1434Q7TQR9 312 aa11.84□□□□□ -0.51
Nup88-202ENSMUST00000108530 MmdQ9CQY7 238 aa11.84□□□□□ -0.51
Nup88-202ENSMUST00000108530 Ndufb3Q9CQZ6 104 aa11.84□□□□□ -0.51
Nup88-202ENSMUST00000108530 Pygo1Q9D0P5 417 aa11.84□□□□□ -0.51
Nup88-202ENSMUST00000108530 Efcab10Q9D581 132 aa11.84□□□□□ -0.51
Nup88-202ENSMUST00000108530 Pus1Q9WU56 423 aa11.84□□□□□ -0.51
Nup88-202ENSMUST00000108530 Ighv14-2A0A075B5R7 117 aa11.83□□□□□ -0.52
Nup88-202ENSMUST00000108530 Igkv1-132A0A0B4J1H9 120 aa11.83□□□□□ -0.52
Nup88-202ENSMUST00000108530 A630076J17RikJ3QQ32 107 aa11.83□□□□□ -0.52
Nup88-202ENSMUST00000108530 Csn1s2bP02664 143 aa11.83□□□□□ -0.52
Nup88-202ENSMUST00000108530 Trav17A0A075B655 113 aa11.83□□□□□ -0.52
Nup88-202ENSMUST00000108530 Olfr1191-ps1A0A1L1STD5 311 aa11.83□□□□□ -0.52
Nup88-202ENSMUST00000108530 Olfr1124A2AT86 318 aa11.83□□□□□ -0.52
Nup88-202ENSMUST00000108530 Tmem139E9PX92 214 aa11.83□□□□□ -0.52
Nup88-202ENSMUST00000108530 Cd79bP15530 228 aa11.83□□□□□ -0.52
Nup88-202ENSMUST00000108530 Olfr335-psQ7TRY6 312 aa11.83□□□□□ -0.52
Nup88-202ENSMUST00000108530 Zfp874aQ8BX23 447 aa11.83□□□□□ -0.52
Nup88-202ENSMUST00000108530 Zfp459Q8BZ17 267 aa11.83□□□□□ -0.52
Nup88-202ENSMUST00000108530 AmtQ8CFA2 403 aaKnown RBP11.83□□□□□ -0.52
Nup88-202ENSMUST00000108530 Q9CRC3 126 aa11.83□□□□□ -0.52
Nup88-202ENSMUST00000108530 Tmem190Q9D2E9 166 aa11.83□□□□□ -0.52
Nup88-202ENSMUST00000108530 Olfr154Q9QY00 318 aa11.83□□□□□ -0.52
Nup88-202ENSMUST00000108530 Osr1Q9WVG7 266 aa11.83□□□□□ -0.52
Nup88-202ENSMUST00000108530 OtogO55225 2910 aa11.82□□□□□ -0.52
Nup88-202ENSMUST00000108530 Gm21732J3QM79 361 aa11.82□□□□□ -0.52
Nup88-202ENSMUST00000108530 Gm21921J3QNB5 361 aa11.82□□□□□ -0.52
Nup88-202ENSMUST00000108530 P06323 132 aa11.82□□□□□ -0.52
Nup88-202ENSMUST00000108530 Ube2g2P60605 165 aa11.82□□□□□ -0.52
Nup88-202ENSMUST00000108530 Iba57Q8CAK1 358 aaKnown RBP11.82□□□□□ -0.52
Nup88-202ENSMUST00000108530 Exosc2Q8VBV3 293 aaKnown RBP11.82□□□□□ -0.52
Nup88-202ENSMUST00000108530 Olfr435Q8VFS3 313 aa11.82□□□□□ -0.52
Nup88-202ENSMUST00000108530 Stard4Q99JV5 224 aa11.82□□□□□ -0.52
Nup88-202ENSMUST00000108530 Mlst8Q9DCJ1 326 aa11.82□□□□□ -0.52
Nup88-202ENSMUST00000108530 Vmn1r194J3JS27 296 aa11.82□□□□□ -0.52
Nup88-202ENSMUST00000108530 Higd1cQ76I25 96 aa11.82□□□□□ -0.52
Nup88-202ENSMUST00000108530 Q8C708 225 aa11.82□□□□□ -0.52
Nup88-202ENSMUST00000108530 Olfr211Q8VGH2 309 aa11.82□□□□□ -0.52
Nup88-202ENSMUST00000108530 Fkbp11Q9D1M7 201 aa11.82□□□□□ -0.52
Nup88-202ENSMUST00000108530 Abca1P41233 2261 aa11.82□□□□□ -0.52
Nup88-202ENSMUST00000108530 Defb18Q30KP5 85 aa11.81□□□□□ -0.52
Nup88-202ENSMUST00000108530 Vmn1r62Q8R2C0 300 aa11.81□□□□□ -0.52
Nup88-202ENSMUST00000108530 Rnf125Q9D9R0 233 aa11.81□□□□□ -0.52
Nup88-202ENSMUST00000108530 Samt1A2BED8 237 aa11.81□□□□□ -0.52
Nup88-202ENSMUST00000108530 Gm15140A2BEE3 237 aa11.81□□□□□ -0.52
Nup88-202ENSMUST00000108530 Vmn1r78K7N608 313 aa11.81□□□□□ -0.52
Nup88-202ENSMUST00000108530 Efnb3O35393 340 aa11.81□□□□□ -0.52
Nup88-202ENSMUST00000108530 Hoxa5P09021 270 aa11.81□□□□□ -0.52
Nup88-202ENSMUST00000108530 Sf3a2Q62203 475 aaKnown RBP11.81□□□□□ -0.52
Nup88-202ENSMUST00000108530 Aadacl4Q8BM81 407 aa11.81□□□□□ -0.52
Nup88-202ENSMUST00000108530 Msrb3Q8BU85 253 aa11.81□□□□□ -0.52
Nup88-202ENSMUST00000108530 Rnase2aQ8K196 155 aa11.81□□□□□ -0.52
Nup88-202ENSMUST00000108530 Angptl6Q8R0Z6 457 aa11.81□□□□□ -0.52
Nup88-202ENSMUST00000108530 Gp2Q9D733 531 aa11.81□□□□□ -0.52
Nup88-202ENSMUST00000108530 Ighv7-3A0A075B5R2 120 aa11.8□□□□□ -0.52
Nup88-202ENSMUST00000108530 Gm37388A0A0A6YY46 143 aa11.8□□□□□ -0.52
Nup88-202ENSMUST00000108530 Olfr282A1L1B4 308 aa11.8□□□□□ -0.52
Nup88-202ENSMUST00000108530 Olfr978E9Q985 311 aa11.8□□□□□ -0.52
Nup88-202ENSMUST00000108530 Gm5108J3QP01 101 aa11.8□□□□□ -0.52
Nup88-202ENSMUST00000108530 Lynx1P0DP60 116 aa11.8□□□□□ -0.52
Nup88-202ENSMUST00000108530 Loxl2P58022 776 aa11.8□□□□□ -0.52
Nup88-202ENSMUST00000108530 Rhox4gQ2MDF7 205 aa11.8□□□□□ -0.52
Nup88-202ENSMUST00000108530 Rhox4dQ2MDG0 205 aa11.8□□□□□ -0.52
Nup88-202ENSMUST00000108530 Q3UUX7 111 aa11.8□□□□□ -0.52
Nup88-202ENSMUST00000108530 Rhox4eQ504P9 205 aa11.8□□□□□ -0.52
Nup88-202ENSMUST00000108530 Rph3alQ768S4 302 aa11.8□□□□□ -0.52
Nup88-202ENSMUST00000108530 Fam168aQ8BGZ2 244 aa11.8□□□□□ -0.52
Nup88-202ENSMUST00000108530 9230109A22RikQ8BHE6 111 aa11.8□□□□□ -0.52
Nup88-202ENSMUST00000108530 Fam174bQ8K064 153 aa11.8□□□□□ -0.52
Nup88-202ENSMUST00000108530 Scnm1Q8K136 229 aa11.8□□□□□ -0.52
Nup88-202ENSMUST00000108530 Hspb9Q9DAM3 168 aa11.8□□□□□ -0.52
Nup88-202ENSMUST00000108530 Rhox4bQ9JI43 205 aa11.8□□□□□ -0.52
Nup88-202ENSMUST00000108530 Ovol1Q9WTJ2 267 aa11.8□□□□□ -0.52
Nup88-202ENSMUST00000108530 Vax2Q9WTP9 292 aa11.8□□□□□ -0.52
Nup88-202ENSMUST00000108530 Rab19P35294 217 aa11.79□□□□□ -0.52
Nup88-202ENSMUST00000108530 CryzP47199 331 aa11.79□□□□□ -0.52
Nup88-202ENSMUST00000108530 Dlx4P70436 240 aa11.79□□□□□ -0.52
Nup88-202ENSMUST00000108530 Prrx2Q06348 247 aa11.79□□□□□ -0.52
Nup88-202ENSMUST00000108530 Olfr1371Q7TQT7 311 aa11.79□□□□□ -0.52
Nup88-202ENSMUST00000108530 Fam24aQ8CF27 98 aa11.79□□□□□ -0.52
Nup88-202ENSMUST00000108530 Errfi1Q99JZ7 461 aa11.79□□□□□ -0.52
Nup88-202ENSMUST00000108530 Chac2Q9CQG1 178 aa11.79□□□□□ -0.52
Nup88-202ENSMUST00000108530 AmtnQ9D3J8 213 aa11.79□□□□□ -0.52
Nup88-202ENSMUST00000108530 Mpdu1Q9R0Q9 247 aa11.79□□□□□ -0.52
Nup88-202ENSMUST00000108530 Pfdn5Q9WU28 154 aa11.79□□□□□ -0.52
Nup88-202ENSMUST00000108530 Opn3Q9WUK7 400 aa11.79□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 15.6 ms