RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Dcbld1Q9D4J3 503 aa14.11□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Slc25a35Q5SWT3 300 aa14.11□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Wfdc21Q8BTE6 63 aa14.11□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Col4a1P02463 1669 aa14.11□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 OdamA1E960 273 aa14.11□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 G6pc2Q9Z186 355 aa14.11□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Lcn2P11672 200 aa14.1□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Wdr82Q8BFQ4 313 aa14.1□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Efemp2Q9WVJ9 443 aa14.1□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Zfp646Q6NV66 1788 aa14.1□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Olfr1192-ps1A0A1L1SRD7 309 aa14.1□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Nhlrc1Q8BR37 401 aa14.1□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Sfta2E9PXB6 77 aa14.1□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Defa16P50714 93 aa14.1□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Fbln7Q501P1 440 aa14.1□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Ormdl2Q9CQZ0 153 aa14.1□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Pla2g2fQ9QZT4 168 aa14.1□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Psg27Q497W2 474 aa14.1□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Ighv1-15A0A0A6YXA5 117 aa14.1□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Umad1E0CX23 159 aa14.1□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Olfr466E9Q2B9 308 aa14.1□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 MpzP27573 248 aa14.1□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Trav15-1-dv6-1Q5R1D2 117 aa14.1□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Vgll1Q99NC0 307 aa14.1□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Ntn3Q9R1A3 580 aa14.1□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Ighv7-4A0A0A6YXL5 121 aa14.1□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Znf329Q6GQR8 522 aa14.1□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Zfp119aQ9JIC0 545 aa14.1□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Ss18Q62280 418 aa14.1□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Lrrc26Q91W20 331 aa14.1□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 P01675 107 aa14.09□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 P01676 107 aa14.09□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 P01677 107 aa14.09□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 P01678 107 aa14.09□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Ccl7Q03366 97 aa14.09□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Prss46Q5M8S2 314 aa14.09□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Fgf11P70378 225 aa14.09□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Pilrb2Q2YFS1 225 aa14.09□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Rasl11aQ6IMB1 242 aa14.09□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Olfr364-ps1A0A140T8Q2 307 aa14.09□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Gm10283Q8C3L5 117 aa14.09□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Morn3Q8C5T4 241 aa14.09□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Cela1Q91X79 266 aa14.09□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Defb5Q9EPV9 64 aa14.09□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Prss57Q14B24 284 aa14.09□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 RflnaQ7TS73 204 aa14.09□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Slc35e4Q8K3D6 351 aa14.09□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Tmem50aQ9CXL1 157 aa14.09□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Ccl28Q9JIL2 130 aa14.09□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Ighv6-4A0A0A6YX19 119 aa14.09□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Olfr523Q8VFE7 317 aa14.09□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Obsl1D3YYU8 1804 aaKnown RBP14.08□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Hyls1Q9CXX0 307 aa14.08□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 TgfaP48030 159 aa14.08□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Eda2rQ8BX35 297 aa14.08□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Igkv14-100A0A0G2JG36 117 aa14.08□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 AY761184Q9D848 116 aa14.08□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Gm1553Q66VB7 94 aa14.08□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Negr1Q80Z24 348 aa14.08□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Tff1Q08423 87 aa14.08□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 EppinQ9DA01 134 aa14.08□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Lgals6O54891 301 aa14.08□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Slc25a16Q8C0K5 332 aa14.08□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Defa28D3Z1V9 94 aa14.08□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Defa25Q5G864 92 aa14.08□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Snrnp40Q6PE01 358 aa14.08□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Zfp119bQ8K0G9 543 aa14.08□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Olfr477Q8VGI6 310 aa14.08□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 St6galnac2P70277 373 aa14.07□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Higd1bQ99JY6 98 aa14.07□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Ly6g6fB2RXM6 300 aa14.07□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Mrpl14Q9D1I6 145 aa14.07□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 KcpQ3U492 1550 aa14.07□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 AsmtD3KU66 387 aa14.07□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Hoxd11P23813 323 aa14.07□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Olfr1173Q7TR24 312 aa14.07□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Vgll4Q80V24 287 aa14.07□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Gm45844A0A1B0GRQ2 137 aa14.07□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 D930048N14RikA2AA67 225 aa14.07□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Ifitm5O88728 134 aa14.07□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Phxr1P15973 60 aa14.07□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Fam3dP97805 223 aa14.07□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 SeleQ00690 612 aa14.07□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 BC106179Q8C9L1 186 aa14.07□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 GgactQ923B0 149 aa14.07□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Carhsp1Q9CR86 148 aa14.07□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Awat1A2ADU9 328 aa14.07□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Mpv17P19258 176 aa14.07□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Mrpl27Q99N92 148 aa14.07□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Tmem160Q9D938 188 aa14.07□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Olfr1369-ps1A0A140T8K7 317 aa14.07□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Olfr263Q7TQT8 317 aa14.07□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Igsf23B2RTN2 239 aa14.06□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Sfxn3Q91V61 321 aa14.06□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Tmem100Q9CQG9 134 aa14.06□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Gm6793B2RXM2 351 aa14.06□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Dnase2P56542 353 aa14.06□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 2900055J20RikQ9D6G3 140 aa14.06□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 EtdQ80SW5 59 aa14.06□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Nabp1Q8BGW5 198 aa14.06□□□□□ -0.16
Retrieved 100 of 22,080 RNA–protein pairs in 46.9 ms