RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 1700008P02RikQ9DAJ8 175 aa12.22□□□□□ -0.45
Nup54-201ENSMUST00000038514 Tmem9bQ9JJR8 199 aa12.22□□□□□ -0.45
Nup54-201ENSMUST00000038514 Olfr1369-ps1A0A140T8K7 317 aa12.22□□□□□ -0.45
Nup54-201ENSMUST00000038514 P01787 123 aa12.22□□□□□ -0.45
Nup54-201ENSMUST00000038514 Ly6c1P0CW02 131 aa12.22□□□□□ -0.45
Nup54-201ENSMUST00000038514 Dynlrb1P62627 96 aa12.22□□□□□ -0.45
Nup54-201ENSMUST00000038514 Ubald1Q6P3B2 176 aa12.22□□□□□ -0.45
Nup54-201ENSMUST00000038514 Fam222bQ6P539 562 aa12.22□□□□□ -0.45
Nup54-201ENSMUST00000038514 Olfr263Q7TQT8 317 aa12.22□□□□□ -0.45
Nup54-201ENSMUST00000038514 COA4Q8BT51 87 aa12.22□□□□□ -0.45
Nup54-201ENSMUST00000038514 Mbnl2Q8C181 373 aaKnown RBP12.22□□□□□ -0.45
Nup54-201ENSMUST00000038514 Olfr33Q8VGX7 318 aa12.22□□□□□ -0.45
Nup54-201ENSMUST00000038514 Psmg3Q9CZH3 122 aa12.22□□□□□ -0.45
Nup54-201ENSMUST00000038514 Ighv5-12-4A0A0A6YWG4 117 aa12.21□□□□□ -0.45
Nup54-201ENSMUST00000038514 Olfr1179A2AUS6 307 aa12.21□□□□□ -0.45
Nup54-201ENSMUST00000038514 PigyP0C1P0 71 aa12.21□□□□□ -0.45
Nup54-201ENSMUST00000038514 Zfp58P16372 489 aa12.21□□□□□ -0.45
Nup54-201ENSMUST00000038514 Twist1P26687 206 aa12.21□□□□□ -0.45
Nup54-201ENSMUST00000038514 GchfrP99025 84 aa12.21□□□□□ -0.45
Nup54-201ENSMUST00000038514 Q0VG62 139 aa12.21□□□□□ -0.45
Nup54-201ENSMUST00000038514 Olfr1265Q8VEZ3 309 aa12.21□□□□□ -0.45
Nup54-201ENSMUST00000038514 Q9CQ90 155 aa12.21□□□□□ -0.45
Nup54-201ENSMUST00000038514 Rnf2Q9CQJ4 336 aa12.21□□□□□ -0.45
Nup54-201ENSMUST00000038514 Lamp5Q9D387 280 aa12.21□□□□□ -0.45
Nup54-201ENSMUST00000038514 DscamQ9ERC8 2013 aa12.21□□□□□ -0.45
Nup54-201ENSMUST00000038514 Igkv1-131A0A140T8M8 120 aa12.21□□□□□ -0.46
Nup54-201ENSMUST00000038514 Zfp708F8VPP0 541 aa12.21□□□□□ -0.46
Nup54-201ENSMUST00000038514 P04942 107 aa12.21□□□□□ -0.46
Nup54-201ENSMUST00000038514 Sumo1P63166 101 aaKnown RBP12.21□□□□□ -0.46
Nup54-201ENSMUST00000038514 Folr2Q05685 251 aa12.21□□□□□ -0.46
Nup54-201ENSMUST00000038514 Prb1Q91X93 504 aa12.21□□□□□ -0.46
Nup54-201ENSMUST00000038514 Nus1Q99LJ8 297 aa12.21□□□□□ -0.46
Nup54-201ENSMUST00000038514 Prr30Q9D9B7 401 aa12.21□□□□□ -0.46
Nup54-201ENSMUST00000038514 9830107B12RikD3Z5D6 160 aa12.2□□□□□ -0.46
Nup54-201ENSMUST00000038514 Olfr978E9Q985 311 aa12.2□□□□□ -0.46
Nup54-201ENSMUST00000038514 Lgals1P16045 135 aaKnown RBP12.2□□□□□ -0.46
Nup54-201ENSMUST00000038514 Lgals3P16110 264 aaKnown RBP12.2□□□□□ -0.46
Nup54-201ENSMUST00000038514 F7P70375 446 aa12.2□□□□□ -0.46
Nup54-201ENSMUST00000038514 Rpl19P84099 196 aaKnown RBP12.2□□□□□ -0.46
Nup54-201ENSMUST00000038514 Dram1Q9DC58 238 aa12.2□□□□□ -0.46
Nup54-201ENSMUST00000038514 Ascl5M0QWB7 188 aa12.2□□□□□ -0.46
Nup54-201ENSMUST00000038514 StumQ0VBF8 141 aa12.2□□□□□ -0.46
Nup54-201ENSMUST00000038514 Wfdc8Q4KUS1 273 aa12.2□□□□□ -0.46
Nup54-201ENSMUST00000038514 Sp9Q64HY3 484 aa12.2□□□□□ -0.46
Nup54-201ENSMUST00000038514 Ube2d2bQ6ZWY6 147 aa12.2□□□□□ -0.46
Nup54-201ENSMUST00000038514 Olfr965Q7TRA7 312 aa12.2□□□□□ -0.46
Nup54-201ENSMUST00000038514 Zfp874aQ8BX23 447 aa12.2□□□□□ -0.46
Nup54-201ENSMUST00000038514 Stpg2Q8C8J0 561 aa12.2□□□□□ -0.46
Nup54-201ENSMUST00000038514 Rgs13Q8K443 158 aa12.2□□□□□ -0.46
Nup54-201ENSMUST00000038514 Ighv1-39A0A075B5V5 117 aa12.19□□□□□ -0.46
Nup54-201ENSMUST00000038514 Trbv19A0A0B4J1H4 117 aa12.19□□□□□ -0.46
Nup54-201ENSMUST00000038514 Gm21775J3KMK6 180 aa12.19□□□□□ -0.46
Nup54-201ENSMUST00000038514 Hoxb4P10284 250 aa12.19□□□□□ -0.46
Nup54-201ENSMUST00000038514 Olfr147Q60886 317 aa12.19□□□□□ -0.46
Nup54-201ENSMUST00000038514 Ccl12Q62401 104 aa12.19□□□□□ -0.46
Nup54-201ENSMUST00000038514 Ankrd55Q8BLD6 626 aa12.19□□□□□ -0.46
Nup54-201ENSMUST00000038514 Slc36a4Q8CH36 500 aa12.19□□□□□ -0.46
Nup54-201ENSMUST00000038514 Olfr495Q8VF12 330 aa12.19□□□□□ -0.46
Nup54-201ENSMUST00000038514 ChtopQ9CY57 249 aaKnown RBP12.19□□□□□ -0.46
Nup54-201ENSMUST00000038514 Lurap1Q9D6I9 239 aa12.19□□□□□ -0.46
Nup54-201ENSMUST00000038514 Gm36368A0A1D5RLK8 91 aa12.19□□□□□ -0.46
Nup54-201ENSMUST00000038514 Hsbp1l1B2RXB2 72 aa12.19□□□□□ -0.46
Nup54-201ENSMUST00000038514 Wt1P22561 449 aa12.19□□□□□ -0.46
Nup54-201ENSMUST00000038514 KhkP97328 298 aa12.19□□□□□ -0.46
Nup54-201ENSMUST00000038514 Znf691Q3TDE8 283 aa12.19□□□□□ -0.46
Nup54-201ENSMUST00000038514 Trav3-3Q5R1C3 114 aa12.19□□□□□ -0.46
Nup54-201ENSMUST00000038514 Olfr959Q9EQ86 311 aa12.19□□□□□ -0.46
Nup54-201ENSMUST00000038514 Ly96Q9JHF9 160 aa12.19□□□□□ -0.46
Nup54-201ENSMUST00000038514 Zfp930A0A1D5RM15 441 aa12.18□□□□□ -0.46
Nup54-201ENSMUST00000038514 Gm6993A0A1W2P738 69 aa12.18□□□□□ -0.46
Nup54-201ENSMUST00000038514 Cdkn1bP46414 197 aa12.18□□□□□ -0.46
Nup54-201ENSMUST00000038514 Tas2r114Q7M722 309 aa12.18□□□□□ -0.46
Nup54-201ENSMUST00000038514 Fam168aQ8BGZ2 244 aa12.18□□□□□ -0.46
Nup54-201ENSMUST00000038514 Gng10Q9CXP8 68 aa12.18□□□□□ -0.46
Nup54-201ENSMUST00000038514 Celsr3Q91ZI0 3301 aa12.18□□□□□ -0.46
Nup54-201ENSMUST00000038514 Trav16A0A075B653 116 aa12.18□□□□□ -0.46
Nup54-201ENSMUST00000038514 1700084M14RikB1AT01 78 aa12.18□□□□□ -0.46
Nup54-201ENSMUST00000038514 Tarm1B6A8R8 288 aa12.18□□□□□ -0.46
Nup54-201ENSMUST00000038514 Gm9964E9Q9S5 144 aa12.18□□□□□ -0.46
Nup54-201ENSMUST00000038514 Cd200r3Q5UKY4 296 aa12.18□□□□□ -0.46
Nup54-201ENSMUST00000038514 Olfr859Q7TRF5 309 aa12.18□□□□□ -0.46
Nup54-201ENSMUST00000038514 Prss28Q924N9 274 aa12.18□□□□□ -0.46
Nup54-201ENSMUST00000038514 Rnf7Q9WTZ1 113 aa12.18□□□□□ -0.46
Nup54-201ENSMUST00000038514 Vps13cQ8BX70 3748 aa12.17□□□□□ -0.46
Nup54-201ENSMUST00000038514 Trav5-1A0A075B5Z7 114 aa12.17□□□□□ -0.46
Nup54-201ENSMUST00000038514 Trav13n-4A0A0G2JG01 110 aa12.17□□□□□ -0.46
Nup54-201ENSMUST00000038514 Fcrl6A1YIY0 268 aa12.17□□□□□ -0.46
Nup54-201ENSMUST00000038514 Vmn1r119E9Q4H3 307 aa12.17□□□□□ -0.46
Nup54-201ENSMUST00000038514 Gm21913J3KML9 361 aa12.17□□□□□ -0.46
Nup54-201ENSMUST00000038514 Gm21776J3QPJ5 361 aa12.17□□□□□ -0.46
Nup54-201ENSMUST00000038514 Klf12O35738 402 aa12.17□□□□□ -0.46
Nup54-201ENSMUST00000038514 P01723 117 aa12.17□□□□□ -0.46
Nup54-201ENSMUST00000038514 P01806 116 aa12.17□□□□□ -0.46
Nup54-201ENSMUST00000038514 Ube2l3P68037 154 aaKnown RBP12.17□□□□□ -0.46
Nup54-201ENSMUST00000038514 Tff3Q62395 81 aa12.17□□□□□ -0.46
Nup54-201ENSMUST00000038514 Olfr266Q8VFC3 316 aa12.17□□□□□ -0.46
Nup54-201ENSMUST00000038514 Olfr822Q8VFU1 312 aa12.17□□□□□ -0.46
Nup54-201ENSMUST00000038514 Olfr982Q8VGB3 321 aa12.17□□□□□ -0.46
Nup54-201ENSMUST00000038514 AplnrQ9WV08 377 aa12.17□□□□□ -0.46
Nup54-201ENSMUST00000038514 Gm37388A0A0A6YY46 143 aa12.16□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 46.5 ms