RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Ifna12Q80SS5 189 aa9.4□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Elovl5Q8BHI7 299 aa9.4□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Olfr1462Q8VFW3 307 aa9.4□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Prss37Q9DAA4 237 aa9.4□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Dnase2bQ9QY48 354 aa9.4□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Cpsf4lE9Q2N0 280 aa9.4□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Gm10020E9QAZ2 204 aa9.4□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Spint5J3KMK8 105 aa9.4□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Gm21789J3QMZ1 123 aa9.4□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Gm21870J3QPN2 123 aa9.4□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Gm21883J3QPV3 123 aa9.4□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Cxxc4Q6NXI8 198 aa9.4□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Olfr153Q7TR48 307 aa9.4□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Olfr996Q7TRA0 314 aa9.4□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Olfr1330Q8VEY6 315 aa9.4□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Rpl15Q9CZM2 204 aaKnown RBP9.4□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Nhlh1Q02576 133 aa9.4□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Gm10803Q3TZS6 135 aa9.4□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Tmem11Q8BK08 190 aa9.4□□□□□ -0.9
Topbp1-201ENSMUST00000035164 CrhQ8CIT0 187 aa9.4□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Bpifa5Q9CQX3 270 aa9.4□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Rnase4Q9JJH1 148 aa9.4□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Ncor2Q9WU42 2472 aaKnown RBP9.4□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Gm6096D3YTY6 151 aa9.4□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Olfr978E9Q985 311 aa9.4□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Gm21882J3QN86 361 aa9.4□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Hes1P35428 282 aa9.4□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Clec4b2Q67DU8 208 aa9.4□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Ssbp1Q9CYR0 152 aaKnown RBP9.4□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Prr30Q9D9B7 401 aa9.4□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Dcaf10A2AKB9 566 aa9.39□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Adamts17E9Q4D1 1122 aa9.39□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Defa35E9QLQ1 93 aa9.39□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Rom1P32958 351 aa9.39□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Rac2Q05144 192 aa9.39□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Trappc1Q5NCF2 145 aa9.39□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Psg17Q62056 475 aa9.39□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Jpt2Q6PGH2 190 aaKnown RBP9.39□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Dido1Q8C9B9 2256 aaKnown RBP9.39□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Gm15293D3YX02 93 aa9.39□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Sod1P08228 154 aaKnown RBP9.39□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Hoxd11P23813 323 aa9.39□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Q3U1D9 316 aa9.39□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Gm4894Q8CA09 118 aa9.39□□□□□ -0.91
Topbp1-201ENSMUST00000035164 BC053393A0A0B4J1F6 192 aa9.39□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Igll1P20764 209 aa9.39□□□□□ -0.91
Topbp1-201ENSMUST00000035164 C5ar1P30993 351 aa9.39□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Klf14Q19A41 325 aa9.39□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Znrd1Q791N7 123 aa9.39□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Znf787Q8BIF9 381 aa9.39□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Nit1Q8VDK1 323 aa9.39□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Plpp2Q9DAX2 276 aa9.39□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Mpdu1Q9R0Q9 247 aa9.39□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Duxbl2Q7TNE6 350 aa9.39□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Tln1P26039 2541 aaKnown RBP9.39□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Wdr86D3Z757 380 aa9.38□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Tcl1b2P56841 117 aa9.38□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Gm10775Q3V290 127 aa9.38□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Q6PIU9 354 aa9.38□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Zfp874aQ8BX23 447 aa9.38□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Ppp1r27Q9D119 154 aa9.38□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Mapk1ip1Q9D7G9 263 aa9.38□□□□□ -0.91
Topbp1-201ENSMUST00000035164 LenepQ9WVB6 61 aa9.38□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Gm27027S4R1M6 97 aa9.38□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Gm6665F6Y363 85 aa9.38□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Ren2P00796 401 aa9.38□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Gng5Q80SZ7 68 aa9.38□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Ammecr1lQ8JZZ6 310 aa9.38□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Nabp2Q8R2Y9 212 aa9.38□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Gm37388A0A0A6YY46 143 aa9.38□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Gm45623A0A1B0GSF6 103 aa9.38□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Rpp30O88796 268 aaKnown RBP9.38□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Col8a2P25318 699 aa9.38□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Rnf115Q9D0C1 305 aa9.38□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Gpr35Q9ES90 307 aa9.38□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Olfr918E9PVZ7 325 aa9.38□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Ccdc188F6WEU2 249 aa9.38□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Gm3512L7N206 146 aa9.38□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Prss46Q5M8S2 314 aa9.38□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Dolpp1Q9JMF7 238 aa9.38□□□□□ -0.91
Topbp1-201ENSMUST00000035164 G6pc2Q9Z186 355 aa9.38□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Vmn1r61W4VSP5 300 aa9.38□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Ms4a12A0A087WSB9 263 aa9.38□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Lrrc37aB1AWG4 3215 aa9.38□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Gm2381G3UY53 305 aa9.38□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Olfr898L7N1Z5 316 aa9.38□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Ascl2O35885 263 aa9.38□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Gm10384Q3UQ87 92 aa9.38□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Rtn4rl2Q7M6Z0 420 aa9.38□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Rpl24Q8BP67 157 aaKnown RBP9.38□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Tnfrsf13bQ9ET35 249 aa9.38□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Rev3lQ61493 3122 aa9.37□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Platr25A0A1Y7VIZ1 466 aa9.37□□□□□ -0.91
Topbp1-201ENSMUST00000035164 PigyP0C1P0 71 aa9.37□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Timm10bQ9WV96 100 aa9.37□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Sh2d1bO35324 132 aa9.37□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Neil2Q6R2P8 329 aa9.37□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Ighv1-18A0A0A6YXN4 117 aa9.37□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Prrx1P63013 245 aa9.37□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Zfp420Q7TMN8 578 aa9.37□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 42.3 ms