RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Ly6g6dQ9Z1Q3 135 aa10.62□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Lrp4Q8VI56 1905 aa10.62□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Ighv1-76A0A0G2JFE9 117 aa10.62□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Zfp27P10077 819 aa10.62□□□□□ -0.71
Clcn3-201ENSMUST00000004430 CebpdQ00322 268 aa10.62□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Defb20Q30KP3 96 aa10.62□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Gng5Q80SZ7 68 aa10.62□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Kazald1Q8BJ66 313 aa10.62□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Saxo2Q8BQB6 394 aa10.62□□□□□ -0.71
Clcn3-201ENSMUST00000004430 PpbpQ9EQI5 113 aa10.62□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Bsph2Q0Q236 131 aa10.62□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Gng7Q61016 68 aa10.62□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Foxf1Q61080 378 aa10.62□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Gm45871A0A1B0GRI9 540 aa10.61□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Zcchc24B2RVL6 241 aaKnown RBP10.61□□□□□ -0.71
Clcn3-201ENSMUST00000004430 C2cd4aE9Q861 334 aa10.61□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Gm9242J3QNY1 357 aa10.61□□□□□ -0.71
Clcn3-201ENSMUST00000004430 B2mP01887 119 aa10.61□□□□□ -0.71
Clcn3-201ENSMUST00000004430 GrnP28798 589 aaKnown RBP10.61□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Olfr1441Q8VFV3 318 aa10.61□□□□□ -0.71
Clcn3-201ENSMUST00000004430 4930583I09RikQ9D2E3 102 aa10.61□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Znf22Q9ERU3 237 aa10.61□□□□□ -0.71
Clcn3-201ENSMUST00000004430 SrfQ9JM73 504 aa10.61□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Ramp3Q9WUP1 147 aa10.61□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Fam222bQ6P539 562 aa10.61□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Rhbdd1Q8BHC7 315 aa10.61□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Tusc5Q8C838 173 aa10.61□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Olfr1431Q8VF59 312 aa10.61□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Hdgfl3Q9JMG7 202 aa10.61□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Gm10638F6QEG2 257 aa10.61□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Gm21732J3QM79 361 aa10.61□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Gm21921J3QNB5 361 aa10.61□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Gm27021M0QWE2 156 aa10.61□□□□□ -0.71
Clcn3-201ENSMUST00000004430 TfpiO54819 306 aa10.61□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Ccl2P10148 148 aa10.61□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Tmprss12Q3V0Q7 336 aa10.61□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Vdac2Q60930 295 aaKnown RBP10.61□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Znf641Q8BZ34 422 aa10.61□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Mob3bQ8VE04 216 aa10.61□□□□□ -0.71
Clcn3-201ENSMUST00000004430 H2afb1Q9CQ70 111 aa10.61□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Dolpp1Q9JMF7 238 aa10.61□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Col6a4A2AX52 2309 aa10.6□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Zfp648D3Z0W3 525 aa10.6□□□□□ -0.71
Clcn3-201ENSMUST00000004430 P01658 132 aa10.6□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Pfn1P62962 140 aa10.6□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Olfr25Q7TRD6 313 aa10.6□□□□□ -0.71
Clcn3-201ENSMUST00000004430 4930474N05RikQ8BVR5 218 aa10.6□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Klhdc3Q8VEM9 382 aa10.6□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Slurp1Q9Z0K7 110 aa10.6□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Gm5157A0A087WRH8 301 aa10.6□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Ca5aP23589 299 aa10.6□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Ntf4Q80VU4 209 aa10.6□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Fam206aQ80ZQ9 193 aaKnown RBP10.6□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Vps13aQ5H8C4 3166 aa10.6□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Sp9Q64HY3 484 aa10.6□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Mbnl2Q8C181 373 aaKnown RBP10.6□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Lrrc25Q8K1T1 297 aa10.6□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Wdr86D3Z757 380 aa10.59□□□□□ -0.71
Clcn3-201ENSMUST00000004430 MyadmO35682 320 aaKnown RBP10.59□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Brs3O54798 399 aa10.59□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Cd59bP58019 129 aa10.59□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Defa-rs10Q64263 91 aa10.59□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Onecut2Q6XBJ3 505 aa10.59□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Rnf182Q8C432 247 aa10.59□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Uqcc3Q8K2T4 89 aa10.59□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Fam162bQ9CX19 157 aa10.59□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Sod1P08228 154 aaKnown RBP10.59□□□□□ -0.71
Clcn3-201ENSMUST00000004430 MymxQ2Q5T5 84 aa10.59□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Cks1brtQ3UNC9 96 aa10.59□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Bst1Q64277 311 aa10.59□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Sdk2Q6V4S5 2176 aa10.59□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Spry4Q9WTP2 300 aa10.59□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Mixl1Q9WUI0 231 aa10.59□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Olfr918E9PVZ7 325 aa10.59□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Srsf6Q3TWW8 339 aaKnown RBP10.59□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Olfr965Q7TRA7 312 aa10.59□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Klk13Q8CGR6 276 aa10.59□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Nit1Q8VDK1 323 aa10.59□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Olfr1256Q8VGP1 306 aa10.59□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Olfr1369-ps1A0A140T8K7 317 aa10.58□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Trav3-3Q5R1C3 114 aa10.58□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Pom121l2Q5SW25 972 aa10.58□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Olfr263Q7TQT8 317 aa10.58□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Srrm4Q8BKA3 608 aa10.58□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Cd200r1Q9ES57 326 aa10.58□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Trav6-1A0A075B5Z8 112 aa10.58□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Olfr218E9PWV2 313 aa10.58□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Cpsf4lE9Q2N0 280 aa10.58□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Gm21775J3KMK6 180 aa10.58□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Onecut1O08755 465 aa10.58□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Sub1P11031 127 aaKnown RBP10.58□□□□□ -0.72
Clcn3-201ENSMUST00000004430 UngP97931 306 aa10.58□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Bpifa5Q9CQX3 270 aa10.58□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Olfr1185-ps1F6XP16 303 aa10.58□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Col8a1Q00780 744 aa10.58□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Foxl1Q64731 336 aa10.58□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Olfr411Q7TRW8 315 aa10.58□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Gtf2h5Q8K2X8 71 aa10.58□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Ighv8-2A0A0A6YW58 119 aa10.58□□□□□ -0.72
Clcn3-201ENSMUST00000004430 1500009C09RikD3YYW9 81 aa10.58□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 43.8 ms