RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Olfr963Q7TRA9 311 aa13.39□□□□□ -0.27
Shh-201ENSMUST00000002708 Fam168aQ8BGZ2 244 aa13.39□□□□□ -0.27
Shh-201ENSMUST00000002708 EpcamQ99JW5 315 aa13.39□□□□□ -0.27
Shh-201ENSMUST00000002708 Nicn1Q9CQM0 213 aa13.39□□□□□ -0.27
Shh-201ENSMUST00000002708 Prss37Q9DAA4 237 aa13.39□□□□□ -0.27
Shh-201ENSMUST00000002708 Susd2Q9DBX3 820 aa13.39□□□□□ -0.27
Shh-201ENSMUST00000002708 Icam4Q9ERM2 262 aa13.39□□□□□ -0.27
Shh-201ENSMUST00000002708 Gm9964E9Q9S5 144 aa13.39□□□□□ -0.27
Shh-201ENSMUST00000002708 Gm4791J3QQ14 102 aa13.39□□□□□ -0.27
Shh-201ENSMUST00000002708 Olfr898L7N1Z5 316 aa13.39□□□□□ -0.27
Shh-201ENSMUST00000002708 Bst1Q64277 311 aa13.39□□□□□ -0.27
Shh-201ENSMUST00000002708 Ankrd55Q8BLD6 626 aa13.39□□□□□ -0.27
Shh-201ENSMUST00000002708 Vmn1r222Q8R269 308 aa13.39□□□□□ -0.27
Shh-201ENSMUST00000002708 Olfr76Q8VFV2 317 aa13.39□□□□□ -0.27
Shh-201ENSMUST00000002708 Btf3l4Q9CQH7 158 aaKnown RBP13.39□□□□□ -0.27
Shh-201ENSMUST00000002708 Rnf7Q9WTZ1 113 aa13.39□□□□□ -0.27
Shh-201ENSMUST00000002708 Slc35d1A2AKQ0 355 aa13.38□□□□□ -0.27
Shh-201ENSMUST00000002708 Olfr1189A2AV11 306 aa13.38□□□□□ -0.27
Shh-201ENSMUST00000002708 Ren2P00796 401 aa13.38□□□□□ -0.27
Shh-201ENSMUST00000002708 P01630 113 aa13.38□□□□□ -0.27
Shh-201ENSMUST00000002708 Klk1b22P15948 259 aa13.38□□□□□ -0.27
Shh-201ENSMUST00000002708 Olfr15P23275 312 aa13.38□□□□□ -0.27
Shh-201ENSMUST00000002708 Arl14eplQ3UKZ7 152 aa13.38□□□□□ -0.27
Shh-201ENSMUST00000002708 Olfr822Q8VFU1 312 aa13.38□□□□□ -0.27
Shh-201ENSMUST00000002708 Fam103a1Q9CQY2 119 aaKnown RBP13.38□□□□□ -0.27
Shh-201ENSMUST00000002708 Rnf125Q9D9R0 233 aa13.38□□□□□ -0.27
Shh-201ENSMUST00000002708 SetxA2AKX3 2646 aa13.38□□□□□ -0.27
Shh-201ENSMUST00000002708 Zfp980A2A9J5 645 aa13.38□□□□□ -0.27
Shh-201ENSMUST00000002708 H2al1jA2BFR3 109 aa13.38□□□□□ -0.27
Shh-201ENSMUST00000002708 Mtnd6P03925 172 aa13.38□□□□□ -0.27
Shh-201ENSMUST00000002708 KncnQ307W7 124 aa13.38□□□□□ -0.27
Shh-201ENSMUST00000002708 Trbv3A0A0A6YYE2 117 aa13.37□□□□□ -0.27
Shh-201ENSMUST00000002708 Ifna5P07349 189 aa13.37□□□□□ -0.27
Shh-201ENSMUST00000002708 Mien1Q9CQ86 115 aa13.37□□□□□ -0.27
Shh-201ENSMUST00000002708 Ceacam11Q9D0Z8 303 aa13.37□□□□□ -0.27
Shh-201ENSMUST00000002708 DysfQ9ESD7 2090 aa13.37□□□□□ -0.27
Shh-201ENSMUST00000002708 Olfr1116E9PXB8 307 aa13.37□□□□□ -0.27
Shh-201ENSMUST00000002708 Cd59aO55186 123 aa13.37□□□□□ -0.27
Shh-201ENSMUST00000002708 B2mP01887 119 aa13.37□□□□□ -0.27
Shh-201ENSMUST00000002708 Pcgf2P23798 342 aaKnown RBP13.37□□□□□ -0.27
Shh-201ENSMUST00000002708 PirtQ8BFY0 135 aa13.37□□□□□ -0.27
Shh-201ENSMUST00000002708 Ly96Q9JHF9 160 aa13.37□□□□□ -0.27
Shh-201ENSMUST00000002708 Pla2g2eQ9QUL3 142 aa13.37□□□□□ -0.27
Shh-201ENSMUST00000002708 Tln2Q71LX4 2375 aa13.37□□□□□ -0.27
Shh-201ENSMUST00000002708 Map1aQ9QYR6 2776 aa13.37□□□□□ -0.27
Shh-201ENSMUST00000002708 Arhgef17Q80U35 2057 aa13.36□□□□□ -0.27
Shh-201ENSMUST00000002708 Trav6n-5A0A075B621 112 aa13.36□□□□□ -0.27
Shh-201ENSMUST00000002708 Trav6-5A0A075B6B5 112 aa13.36□□□□□ -0.27
Shh-201ENSMUST00000002708 Gm37388A0A0A6YY46 143 aa13.36□□□□□ -0.27
Shh-201ENSMUST00000002708 Vmn1r149E9PWL6 307 aa13.36□□□□□ -0.27
Shh-201ENSMUST00000002708 Vmn1r101E9Q365 307 aa13.36□□□□□ -0.27
Shh-201ENSMUST00000002708 Vmn1r158G3UY92 307 aa13.36□□□□□ -0.27
Shh-201ENSMUST00000002708 Lyz1P17897 148 aa13.36□□□□□ -0.27
Shh-201ENSMUST00000002708 Twist1P26687 206 aa13.36□□□□□ -0.27
Shh-201ENSMUST00000002708 Rab7aP51150 207 aaKnown RBP13.36□□□□□ -0.27
Shh-201ENSMUST00000002708 StumQ0VBF8 141 aa13.36□□□□□ -0.27
Shh-201ENSMUST00000002708 Gm10645Q3UPY1 145 aa13.36□□□□□ -0.27
Shh-201ENSMUST00000002708 Cd200r3Q5UKY4 296 aa13.36□□□□□ -0.27
Shh-201ENSMUST00000002708 Olfr1330Q8VEY6 315 aa13.36□□□□□ -0.27
Shh-201ENSMUST00000002708 Mapk1ip1Q9D7G9 263 aa13.36□□□□□ -0.27
Shh-201ENSMUST00000002708 Gm6904E9PVF1 202 aa13.36□□□□□ -0.27
Shh-201ENSMUST00000002708 Evi2aP20934 223 aa13.36□□□□□ -0.27
Shh-201ENSMUST00000002708 Fam19a2Q7TPG7 131 aa13.36□□□□□ -0.27
Shh-201ENSMUST00000002708 Gm5148Q8BGG2 154 aa13.36□□□□□ -0.27
Shh-201ENSMUST00000002708 Nabp2Q8R2Y9 212 aa13.36□□□□□ -0.27
Shh-201ENSMUST00000002708 Ppp1r14aQ91VC7 147 aa13.36□□□□□ -0.27
Shh-201ENSMUST00000002708 FibinQ9CQS3 217 aa13.36□□□□□ -0.27
Shh-201ENSMUST00000002708 Eny2Q9JIX0 101 aaKnown RBP13.36□□□□□ -0.27
Shh-201ENSMUST00000002708 PigyP0C1P0 71 aa13.35□□□□□ -0.27
Shh-201ENSMUST00000002708 Khdc1bP0C7A0 126 aa13.35□□□□□ -0.27
Shh-201ENSMUST00000002708 Rom1P32958 351 aa13.35□□□□□ -0.27
Shh-201ENSMUST00000002708 AmelxP63277 210 aa13.35□□□□□ -0.27
Shh-201ENSMUST00000002708 Cib3Q0P523 160 aa13.35□□□□□ -0.27
Shh-201ENSMUST00000002708 Olfr262Q8VFV8 312 aa13.35□□□□□ -0.27
Shh-201ENSMUST00000002708 Zdhhc16Q9ESG8 361 aa13.35□□□□□ -0.27
Shh-201ENSMUST00000002708 Gm14214V9GX35 225 aa13.35□□□□□ -0.27
Shh-201ENSMUST00000002708 Ahctf1Q8CJF7 2243 aaKnown RBP13.35□□□□□ -0.27
Shh-201ENSMUST00000002708 Vmn1r224E9PWK2 298 aa13.35□□□□□ -0.27
Shh-201ENSMUST00000002708 Scgb2a2J3KMP9 96 aa13.35□□□□□ -0.27
Shh-201ENSMUST00000002708 P04940 107 aa13.35□□□□□ -0.27
Shh-201ENSMUST00000002708 P04941 107 aa13.35□□□□□ -0.27
Shh-201ENSMUST00000002708 ApcsP12246 224 aa13.35□□□□□ -0.27
Shh-201ENSMUST00000002708 Rtl4Q3URY0 304 aa13.35□□□□□ -0.27
Shh-201ENSMUST00000002708 Fam222bQ6P539 562 aa13.35□□□□□ -0.27
Shh-201ENSMUST00000002708 Gm4894Q8CA09 118 aa13.35□□□□□ -0.27
Shh-201ENSMUST00000002708 Ercc8Q8CFD5 397 aa13.35□□□□□ -0.27
Shh-201ENSMUST00000002708 Olfr1271Q8VG62 305 aa13.35□□□□□ -0.27
Shh-201ENSMUST00000002708 MmdQ9CQY7 238 aa13.35□□□□□ -0.27
Shh-201ENSMUST00000002708 AplnrQ9WV08 377 aa13.35□□□□□ -0.27
Shh-201ENSMUST00000002708 Psg18B2RSG7 476 aa13.35□□□□□ -0.27
Shh-201ENSMUST00000002708 Zfp708F8VPP0 541 aa13.35□□□□□ -0.27
Shh-201ENSMUST00000002708 Lgals3P16110 264 aaKnown RBP13.35□□□□□ -0.27
Shh-201ENSMUST00000002708 Pafah1b2Q61206 229 aa13.35□□□□□ -0.27
Shh-201ENSMUST00000002708 Fxyd3Q61835 88 aa13.35□□□□□ -0.27
Shh-201ENSMUST00000002708 Ube2d2bQ6ZWY6 147 aa13.35□□□□□ -0.27
Shh-201ENSMUST00000002708 Ndufs8Q8K3J1 212 aa13.35□□□□□ -0.27
Shh-201ENSMUST00000002708 Olfr1441Q8VFV3 318 aa13.35□□□□□ -0.27
Shh-201ENSMUST00000002708 Rpp25lQ99JH1 163 aa13.35□□□□□ -0.27
Shh-201ENSMUST00000002708 4930412O13RikQ9D5M9 106 aa13.35□□□□□ -0.27
Shh-201ENSMUST00000002708 Piezo1E2JF22 2547 aa13.34□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 72.5 ms