RNA–Protein interactions for RNA: ENST00000642072.1

LINC00339-212, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 338 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-212ENST00000642072 Q0VG73 95 aa5.49□□□□□ -1.53
LINC00339-212ENST00000642072 LGALSLQ3ZCW2 172 aaPredicted RBP5.49□□□□□ -1.53
LINC00339-212ENST00000642072 SMUG1Q53HV7 270 aa5.49□□□□□ -1.53
LINC00339-212ENST00000642072 DMRTA1Q5VZB9 504 aa5.49□□□□□ -1.53
LINC00339-212ENST00000642072 SDIM1Q6ZPB5 146 aa5.49□□□□□ -1.53
LINC00339-212ENST00000642072 C9orf163Q8N9P6 203 aa5.49□□□□□ -1.53
LINC00339-212ENST00000642072 PPP1R1CQ8WVI7 109 aa5.49□□□□□ -1.53
LINC00339-212ENST00000642072 IL36BQ9NZH7 164 aa5.49□□□□□ -1.53
LINC00339-212ENST00000642072 A0A087WX48 190 aa5.48□□□□□ -1.53
LINC00339-212ENST00000642072 G3V3Q6 166 aa5.48□□□□□ -1.53
LINC00339-212ENST00000642072 RHODO00212 210 aa5.48□□□□□ -1.53
LINC00339-212ENST00000642072 IFNA7P01567 189 aa5.48□□□□□ -1.53
LINC00339-212ENST00000642072 STAG3L2P0CL84 134 aa5.48□□□□□ -1.53
LINC00339-212ENST00000642072 STAG3L3P0CL85 134 aa5.48□□□□□ -1.53
LINC00339-212ENST00000642072 UBE2D3P61077 147 aa5.48□□□□□ -1.53
LINC00339-212ENST00000642072 UBE2D2P62837 147 aa5.48□□□□□ -1.53
LINC00339-212ENST00000642072 ELOBQ15370 118 aa5.48□□□□□ -1.53
LINC00339-212ENST00000642072 DNLZQ5SXM8 178 aa5.48□□□□□ -1.53
LINC00339-212ENST00000642072 DGAT2L7PQ6IED9 249 aa5.48□□□□□ -1.53
LINC00339-212ENST00000642072 KRTAP26-1Q6PEX3 210 aa5.48□□□□□ -1.53
LINC00339-212ENST00000642072 TEX261Q6UWH6 196 aa5.48□□□□□ -1.53
LINC00339-212ENST00000642072 C1orf43Q9BWL3 253 aa5.48□□□□□ -1.53
LINC00339-212ENST00000642072 SMIM3Q9BZL3 60 aa5.48□□□□□ -1.53
LINC00339-212ENST00000642072 TRBV10-1A0A0K0K1A3 114 aa5.47□□□□□ -1.53
LINC00339-212ENST00000642072 A0A1W2PPV4 95 aa5.47□□□□□ -1.53
LINC00339-212ENST00000642072 HMSDA8MTL9 139 aa5.47□□□□□ -1.53
LINC00339-212ENST00000642072 H3BVH4 76 aa5.47□□□□□ -1.53
LINC00339-212ENST00000642072 SSNA1O43805 119 aa5.47□□□□□ -1.53
LINC00339-212ENST00000642072 MPC2O95563 127 aa5.47□□□□□ -1.53
LINC00339-212ENST00000642072 RPL12P30050 165 aaKnown RBP5.47□□□□□ -1.53
LINC00339-212ENST00000642072 ASIPP42127 132 aa5.47□□□□□ -1.53
LINC00339-212ENST00000642072 CYCSP99999 105 aaKnown RBP5.47□□□□□ -1.53
LINC00339-212ENST00000642072 MPV17L2Q567V2 206 aa5.47□□□□□ -1.53
LINC00339-212ENST00000642072 CLLU1Q5K131 121 aa5.47□□□□□ -1.53
LINC00339-212ENST00000642072 SAPCD1Q5SSQ6 148 aa5.47□□□□□ -1.53
LINC00339-212ENST00000642072 PRNTQ86SH4 94 aa5.47□□□□□ -1.53
LINC00339-212ENST00000642072 OR11H4Q8NGC9 324 aa5.47□□□□□ -1.53
LINC00339-212ENST00000642072 OR2G3Q8NGZ4 309 aa5.47□□□□□ -1.53
LINC00339-212ENST00000642072 SCGB1C1Q8TD33 95 aa5.47□□□□□ -1.53
LINC00339-212ENST00000642072 MED9Q9NWA0 146 aa5.47□□□□□ -1.53
LINC00339-212ENST00000642072 EPDR1Q9UM22 224 aa5.47□□□□□ -1.53
LINC00339-212ENST00000642072 A0A087WWL8 130 aa5.46□□□□□ -1.54
LINC00339-212ENST00000642072 TRBV6-8A0A0A6YYG3 113 aa5.46□□□□□ -1.54
LINC00339-212ENST00000642072 SMLR1H3BR10 107 aa5.46□□□□□ -1.54
LINC00339-212ENST00000642072 K7EQM0 130 aa5.46□□□□□ -1.54
LINC00339-212ENST00000642072 S100A4P26447 101 aaKnown RBP5.46□□□□□ -1.54
LINC00339-212ENST00000642072 GCHFRP30047 84 aa5.46□□□□□ -1.54
LINC00339-212ENST00000642072 CDC34P49427 236 aaPredicted RBP5.46□□□□□ -1.54
LINC00339-212ENST00000642072 CRIP1P50238 77 aa5.46□□□□□ -1.54
LINC00339-212ENST00000642072 FAM74A4Q5TZK3 123 aa5.46□□□□□ -1.54
LINC00339-212ENST00000642072 C15orf54Q8N8G6 183 aa5.46□□□□□ -1.54
LINC00339-212ENST00000642072 OR10G8Q8NGN5 311 aa5.46□□□□□ -1.54
LINC00339-212ENST00000642072 RAB24Q969Q5 203 aa5.46□□□□□ -1.54
LINC00339-212ENST00000642072 SFRP2Q96HF1 295 aa5.46□□□□□ -1.54
LINC00339-212ENST00000642072 PRR34Q9NV39 138 aa5.46□□□□□ -1.54
LINC00339-212ENST00000642072 MUC2Q02817 5179 aa5.46□□□□□ -1.54
LINC00339-212ENST00000642072 TRBV7-3A0A075B6L6 115 aa5.45□□□□□ -1.54
LINC00339-212ENST00000642072 A0A0D9SG52 128 aa5.45□□□□□ -1.54
LINC00339-212ENST00000642072 FABP5P3A8MUU1 101 aa5.45□□□□□ -1.54
LINC00339-212ENST00000642072 B4DEV8 164 aa5.45□□□□□ -1.54
LINC00339-212ENST00000642072 KRBOX1C9JBD0 128 aa5.45□□□□□ -1.54
LINC00339-212ENST00000642072 HLA-DQA1P01909 254 aa5.45□□□□□ -1.54
LINC00339-212ENST00000642072 ARMS2P0C7Q2 107 aa5.45□□□□□ -1.54
LINC00339-212ENST00000642072 CNBPP62633 177 aaKnown RBP5.45□□□□□ -1.54
LINC00339-212ENST00000642072 SUMO1P63165 101 aaKnown RBP5.45□□□□□ -1.54
LINC00339-212ENST00000642072 RPL19P84098 196 aaKnown RBP5.45□□□□□ -1.54
LINC00339-212ENST00000642072 ODF1Q14990 250 aa5.45□□□□□ -1.54
LINC00339-212ENST00000642072 MIAQ16674 131 aa5.45□□□□□ -1.54
LINC00339-212ENST00000642072 COX8CQ7Z4L0 72 aa5.45□□□□□ -1.54
LINC00339-212ENST00000642072 ARL2-SNX15V9GYD0 113 aa5.45□□□□□ -1.54
LINC00339-212ENST00000642072 LPAP08519 4548 aa5.45□□□□□ -1.54
LINC00339-212ENST00000642072 TRAV34A0A0B4J273 112 aa5.44□□□□□ -1.54
LINC00339-212ENST00000642072 CRPP02741 224 aa5.44□□□□□ -1.54
LINC00339-212ENST00000642072 RPL36AP83881 106 aaKnown RBP5.44□□□□□ -1.54
LINC00339-212ENST00000642072 PRR27Q6MZM9 219 aa5.44□□□□□ -1.54
LINC00339-212ENST00000642072 KCNIP4Q6PIL6 250 aa5.44□□□□□ -1.54
LINC00339-212ENST00000642072 Q86TA4 180 aa5.44□□□□□ -1.54
LINC00339-212ENST00000642072 RPL36ALQ969Q0 106 aaKnown RBP5.44□□□□□ -1.54
LINC00339-212ENST00000642072 ZC2HC1AQ96GY0 325 aa5.44□□□□□ -1.54
LINC00339-212ENST00000642072 A0A1W2PRE2 83 aa5.43□□□□□ -1.54
LINC00339-212ENST00000642072 GRIFINA4D1Z8 144 aa5.43□□□□□ -1.54
LINC00339-212ENST00000642072 TMEM262E9PQX1 116 aa5.43□□□□□ -1.54
LINC00339-212ENST00000642072 M0R036 132 aa5.43□□□□□ -1.54
LINC00339-212ENST00000642072 ANGP03950 147 aaKnown RBP5.43□□□□□ -1.54
LINC00339-212ENST00000642072 SLPIP03973 132 aa5.43□□□□□ -1.54
LINC00339-212ENST00000642072 PET100P0DJ07 73 aa5.43□□□□□ -1.54
LINC00339-212ENST00000642072 RAB14P61106 215 aa5.43□□□□□ -1.54
LINC00339-212ENST00000642072 NTM-AS1Q6ZSK4 140 aa5.43□□□□□ -1.54
LINC00339-212ENST00000642072 NEXN-AS1Q8NBZ9 246 aa5.43□□□□□ -1.54
LINC00339-212ENST00000642072 SPACA4Q8TDM5 124 aa5.43□□□□□ -1.54
LINC00339-212ENST00000642072 LINC01600Q96MT4 127 aa5.43□□□□□ -1.54
LINC00339-212ENST00000642072 TMEM167BQ9NRX6 74 aa5.43□□□□□ -1.54
LINC00339-212ENST00000642072 A0A087WYN8 130 aa5.42□□□□□ -1.54
LINC00339-212ENST00000642072 M0R381 172 aa5.42□□□□□ -1.54
LINC00339-212ENST00000642072 SH2D1AO60880 128 aa5.42□□□□□ -1.54
LINC00339-212ENST00000642072 CXorf1O96002 111 aa5.42□□□□□ -1.54
LINC00339-212ENST00000642072 CHTF8P0CG12 524 aa5.42□□□□□ -1.54
LINC00339-212ENST00000642072 ZNF345Q14585 488 aa5.42□□□□□ -1.54
LINC00339-212ENST00000642072 LINC01559Q495D7 138 aa5.42□□□□□ -1.54
LINC00339-212ENST00000642072 RNF185Q96GF1 192 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms