RNA–Protein interactions for RNA: ENST00000639439.1

PTPRVP-204, Transcript of protein tyrosine phosphatase, receptor type V, pseudogene, humanhuman

TSL 1 (best)

Gene PTPRVP, Length 821 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRVP-204ENST00000639439 IGHV3-30P01768 117 aa10.43□□□□□ -0.74
PTPRVP-204ENST00000639439 IGHV3-33P01772 117 aa10.43□□□□□ -0.74
PTPRVP-204ENST00000639439 IGHV3-30-3P0DP02 117 aa10.43□□□□□ -0.74
PTPRVP-204ENST00000639439 IGHV3-30-5P0DP03 117 aa10.43□□□□□ -0.74
PTPRVP-204ENST00000639439 FUSP35637 526 aaKnown RBP eCLIP10.43□□□□□ -0.74
PTPRVP-204ENST00000639439 ZFP82Q8N141 532 aa10.43□□□□□ -0.74
PTPRVP-204ENST00000639439 NTN5Q8WTR8 489 aaPredicted RBP10.43□□□□□ -0.74
PTPRVP-204ENST00000639439 SFRP2Q96HF1 295 aa10.43□□□□□ -0.74
PTPRVP-204ENST00000639439 SAMD10Q9BYL1 202 aa10.43□□□□□ -0.74
PTPRVP-204ENST00000639439 Q9HAA7 133 aa10.43□□□□□ -0.74
PTPRVP-204ENST00000639439 TMSB15BA0A087X1C1 80 aa10.42□□□□□ -0.74
PTPRVP-204ENST00000639439 AKAP14Q86UN6 197 aa10.42□□□□□ -0.74
PTPRVP-204ENST00000639439 C14orf178Q8N769 122 aaPredicted RBP10.42□□□□□ -0.74
PTPRVP-204ENST00000639439 TM2D2Q9BX73 214 aa10.42□□□□□ -0.74
PTPRVP-204ENST00000639439 LRCOL1A6NCL2 159 aa10.41□□□□□ -0.74
PTPRVP-204ENST00000639439 M0R381 172 aa10.41□□□□□ -0.74
PTPRVP-204ENST00000639439 H2AFB1P0C5Y9 115 aa10.41□□□□□ -0.74
PTPRVP-204ENST00000639439 GCSHP23434 173 aa10.41□□□□□ -0.74
PTPRVP-204ENST00000639439 TOR2AQ5JU69 321 aa10.41□□□□□ -0.74
PTPRVP-204ENST00000639439 FAM74A4Q5TZK3 123 aa10.41□□□□□ -0.74
PTPRVP-204ENST00000639439 TRAV8-3A0A0A6YYJ7 113 aa10.4□□□□□ -0.74
PTPRVP-204ENST00000639439 TRBV10-1A0A0K0K1A3 114 aa10.4□□□□□ -0.74
PTPRVP-204ENST00000639439 A0A1B0GV50 99 aa10.4□□□□□ -0.74
PTPRVP-204ENST00000639439 CXCL1P09341 107 aa10.4□□□□□ -0.74
PTPRVP-204ENST00000639439 KRTAP10-1P60331 282 aa10.4□□□□□ -0.74
PTPRVP-204ENST00000639439 BAGE2Q86Y30 109 aa10.4□□□□□ -0.74
PTPRVP-204ENST00000639439 A0A087WWL8 130 aa10.39□□□□□ -0.75
PTPRVP-204ENST00000639439 IGLV5-52A0A0A0MRZ9 124 aa10.39□□□□□ -0.75
PTPRVP-204ENST00000639439 SCO2A0A1W2PP80 73 aa10.39□□□□□ -0.75
PTPRVP-204ENST00000639439 XGP55808 180 aa10.39□□□□□ -0.75
PTPRVP-204ENST00000639439 MLST8Q9BVC4 326 aa10.39□□□□□ -0.75
PTPRVP-204ENST00000639439 Q9UF83 564 aa10.39□□□□□ -0.75
PTPRVP-204ENST00000639439 EPM2AB3EWF7 344 aa10.38□□□□□ -0.75
PTPRVP-204ENST00000639439 RPL36AP83881 106 aaKnown RBP10.38□□□□□ -0.75
PTPRVP-204ENST00000639439 TMUB2Q71RG4 321 aa10.38□□□□□ -0.75
PTPRVP-204ENST00000639439 Q8N814 137 aa10.38□□□□□ -0.75
PTPRVP-204ENST00000639439 RPL36ALQ969Q0 106 aaKnown RBP10.38□□□□□ -0.75
PTPRVP-204ENST00000639439 RAB5CP51148 216 aa10.37□□□□□ -0.75
PTPRVP-204ENST00000639439 EIF5AL1Q6IS14 154 aaKnown RBP10.37□□□□□ -0.75
PTPRVP-204ENST00000639439 MANBALQ9NQG1 85 aa10.37□□□□□ -0.75
PTPRVP-204ENST00000639439 COX11Q9Y6N1 276 aa10.37□□□□□ -0.75
PTPRVP-204ENST00000639439 URGCP-MRPS24S4R325 110 aa10.37□□□□□ -0.75
PTPRVP-204ENST00000639439 TCTE3Q8IZS6 198 aa10.36□□□□□ -0.75
PTPRVP-204ENST00000639439 CHCHD7Q9BUK0 85 aa10.36□□□□□ -0.75
PTPRVP-204ENST00000639439 FAT1Q14517 4588 aa10.35□□□□□ -0.75
PTPRVP-204ENST00000639439 TRBV7-3A0A075B6L6 115 aa10.35□□□□□ -0.75
PTPRVP-204ENST00000639439 TRAV1-1A0A0B4J248 108 aa10.35□□□□□ -0.75
PTPRVP-204ENST00000639439 TEX46H3BTG2 121 aa10.35□□□□□ -0.75
PTPRVP-204ENST00000639439 RAB4BP61018 213 aa10.35□□□□□ -0.75
PTPRVP-204ENST00000639439 RPL19P84098 196 aaKnown RBP10.35□□□□□ -0.75
PTPRVP-204ENST00000639439 DAZ4Q86SG3 579 aaKnown RBP10.35□□□□□ -0.75
PTPRVP-204ENST00000639439 NIT1Q86X76 327 aa10.35□□□□□ -0.75
PTPRVP-204ENST00000639439 Q8N3U1 123 aa10.35□□□□□ -0.75
PTPRVP-204ENST00000639439 RMI2Q96E14 147 aa10.35□□□□□ -0.75
PTPRVP-204ENST00000639439 TMEM70Q9BUB7 260 aa10.35□□□□□ -0.75
PTPRVP-204ENST00000639439 SSBP4Q9BWG4 385 aaPredicted RBP10.35□□□□□ -0.75
PTPRVP-204ENST00000639439 DAZ3Q9NR90 486 aaKnown RBP10.35□□□□□ -0.75
PTPRVP-204ENST00000639439 SNAI2O43623 268 aa10.34□□□□□ -0.75
PTPRVP-204ENST00000639439 OR5AL1P0C617 328 aa10.34□□□□□ -0.75
PTPRVP-204ENST00000639439 RPL35P42766 123 aaKnown RBP10.34□□□□□ -0.75
PTPRVP-204ENST00000639439 UBE2D3P61077 147 aa10.34□□□□□ -0.75
PTPRVP-204ENST00000639439 UBE2D2P62837 147 aa10.34□□□□□ -0.75
PTPRVP-204ENST00000639439 ELOBQ15370 118 aa10.34□□□□□ -0.75
PTPRVP-204ENST00000639439 PRR27Q6MZM9 219 aa10.34□□□□□ -0.75
PTPRVP-204ENST00000639439 KCNIP4Q6PIL6 250 aa10.34□□□□□ -0.75
PTPRVP-204ENST00000639439 OR10G8Q8NGN5 311 aa10.34□□□□□ -0.75
PTPRVP-204ENST00000639439 OR10AG1Q8NH19 301 aa10.34□□□□□ -0.75
PTPRVP-204ENST00000639439 FRZBQ92765 325 aa10.34□□□□□ -0.75
PTPRVP-204ENST00000639439 C11orf52Q96A22 123 aa10.34□□□□□ -0.75
PTPRVP-204ENST00000639439 GNG13Q9P2W3 67 aa10.34□□□□□ -0.75
PTPRVP-204ENST00000639439 A0A087WX48 190 aa10.33□□□□□ -0.76
PTPRVP-204ENST00000639439 ZNF56Q15929 161 aa10.33□□□□□ -0.76
PTPRVP-204ENST00000639439 SPANXN1Q5VSR9 72 aa10.33□□□□□ -0.76
PTPRVP-204ENST00000639439 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.33□□□□□ -0.76
PTPRVP-204ENST00000639439 C1QBP02746 253 aa10.31□□□□□ -0.76
PTPRVP-204ENST00000639439 CCL20P78556 96 aa10.31□□□□□ -0.76
PTPRVP-204ENST00000639439 KLK12Q9UKR0 248 aa10.31□□□□□ -0.76
PTPRVP-204ENST00000639439 SMIM17P0DL12 118 aa10.3□□□□□ -0.76
PTPRVP-204ENST00000639439 SULT1A2P50226 295 aa10.3□□□□□ -0.76
PTPRVP-204ENST00000639439 RPS20P60866 119 aaKnown RBP10.3□□□□□ -0.76
PTPRVP-204ENST00000639439 Q5VSD8 79 aa10.3□□□□□ -0.76
PTPRVP-204ENST00000639439 DAZAP1Q96EP5 407 aaKnown RBP10.3□□□□□ -0.76
PTPRVP-204ENST00000639439 SMIM12Q96EX1 92 aa10.3□□□□□ -0.76
PTPRVP-204ENST00000639439 AP1S3Q96PC3 154 aa10.3□□□□□ -0.76
PTPRVP-204ENST00000639439 TRBV6-8A0A0A6YYG3 113 aa10.29□□□□□ -0.76
PTPRVP-204ENST00000639439 F5H697 171 aa10.29□□□□□ -0.76
PTPRVP-204ENST00000639439 PDE6DO43924 150 aa10.29□□□□□ -0.76
PTPRVP-204ENST00000639439 IFNA1P01562 189 aa10.29□□□□□ -0.76
PTPRVP-204ENST00000639439 PKIAP61925 76 aa10.29□□□□□ -0.76
PTPRVP-204ENST00000639439 WFDC2Q14508 124 aa10.29□□□□□ -0.76
PTPRVP-204ENST00000639439 TMEM97Q5BJF2 176 aa10.29□□□□□ -0.76
PTPRVP-204ENST00000639439 CENPWQ5EE01 88 aa10.29□□□□□ -0.76
PTPRVP-204ENST00000639439 NEXN-AS1Q8NBZ9 246 aa10.29□□□□□ -0.76
PTPRVP-204ENST00000639439 UBE2WQ96B02 151 aa10.29□□□□□ -0.76
PTPRVP-204ENST00000639439 DERL1Q9BUN8 251 aa10.29□□□□□ -0.76
PTPRVP-204ENST00000639439 IGKV2D-24A0A075B6R9 120 aa10.28□□□□□ -0.76
PTPRVP-204ENST00000639439 MUC21A0A0G2JKD1 596 aa10.28□□□□□ -0.76
PTPRVP-204ENST00000639439 MUC21A0A140T8X8 626 aa10.28□□□□□ -0.76
PTPRVP-204ENST00000639439 RBFOX3A6NFN3 312 aa10.28□□□□□ -0.76
PTPRVP-204ENST00000639439 TMEM262E9PQX1 116 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms