RNA–Protein interactions for RNA: ENST00000638144.1

CLN6-225, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 576 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-225ENST00000638144 CRYGDP07320 174 aa8.56□□□□□ -1.04
CLN6-225ENST00000638144 CXCL1P09341 107 aa8.56□□□□□ -1.04
CLN6-225ENST00000638144 MED14OSP0DP75 135 aa8.56□□□□□ -1.04
CLN6-225ENST00000638144 PIK3CD-AS1Q5SR53 167 aa8.56□□□□□ -1.04
CLN6-225ENST00000638144 ZFP2Q6ZN57 461 aa8.56□□□□□ -1.04
CLN6-225ENST00000638144 OCC1Q8TAD7 63 aa8.56□□□□□ -1.04
CLN6-225ENST00000638144 FAM210AQ96ND0 272 aa8.56□□□□□ -1.04
CLN6-225ENST00000638144 RNASE7Q9H1E1 156 aaKnown RBP8.56□□□□□ -1.04
CLN6-225ENST00000638144 TMEM250H0YL14 139 aa8.55□□□□□ -1.04
CLN6-225ENST00000638144 RHODO00212 210 aa8.55□□□□□ -1.04
CLN6-225ENST00000638144 SPANXN1Q5VSR9 72 aa8.55□□□□□ -1.04
CLN6-225ENST00000638144 TEX261Q6UWH6 196 aa8.55□□□□□ -1.04
CLN6-225ENST00000638144 C6orf223Q8N319 242 aa8.55□□□□□ -1.04
CLN6-225ENST00000638144 SMIM12Q96EX1 92 aa8.55□□□□□ -1.04
CLN6-225ENST00000638144 PKHD1P08F94 4074 aa8.54□□□□□ -1.04
CLN6-225ENST00000638144 CIDEAO60543 219 aa8.54□□□□□ -1.04
CLN6-225ENST00000638144 OR5AL1P0C617 328 aa8.54□□□□□ -1.04
CLN6-225ENST00000638144 IGLC6P0CF74 106 aa8.54□□□□□ -1.04
CLN6-225ENST00000638144 TTC32Q5I0X7 151 aa8.54□□□□□ -1.04
CLN6-225ENST00000638144 FER1L6-AS1Q8NA97 138 aa8.54□□□□□ -1.04
CLN6-225ENST00000638144 NUDT10Q8NFP7 164 aa8.54□□□□□ -1.04
CLN6-225ENST00000638144 NUDT11Q96G61 164 aa8.54□□□□□ -1.04
CLN6-225ENST00000638144 SSBP4Q9BWG4 385 aaPredicted RBP8.54□□□□□ -1.04
CLN6-225ENST00000638144 MSRB1Q9NZV6 116 aa8.54□□□□□ -1.04
CLN6-225ENST00000638144 SRP19P09132 144 aaKnown RBP8.53□□□□□ -1.04
CLN6-225ENST00000638144 LINC00694P0DN24 101 aa8.53□□□□□ -1.04
CLN6-225ENST00000638144 SRSF3P84103 164 aaKnown RBP8.53□□□□□ -1.04
CLN6-225ENST00000638144 TNP2Q05952 138 aa8.53□□□□□ -1.04
CLN6-225ENST00000638144 ZNF56Q15929 161 aa8.53□□□□□ -1.04
CLN6-225ENST00000638144 SOHLH1Q5JUK2 328 aa8.53□□□□□ -1.04
CLN6-225ENST00000638144 LINC00336Q6ZUF6 198 aa8.53□□□□□ -1.04
CLN6-225ENST00000638144 ATP6V0E2Q8NHE4 81 aa8.53□□□□□ -1.04
CLN6-225ENST00000638144 SMIM7Q9BQ49 75 aa8.53□□□□□ -1.04
CLN6-225ENST00000638144 TNFRSF18Q9Y5U5 241 aa8.53□□□□□ -1.04
CLN6-225ENST00000638144 PKD1P98161 4303 aa8.53□□□□□ -1.04
CLN6-225ENST00000638144 A0A1B0GVY2 172 aa8.52□□□□□ -1.05
CLN6-225ENST00000638144 C9JQL5 133 aa8.52□□□□□ -1.05
CLN6-225ENST00000638144 LINC00315P59091 139 aa8.52□□□□□ -1.05
CLN6-225ENST00000638144 RPS20P60866 119 aaKnown RBP8.52□□□□□ -1.05
CLN6-225ENST00000638144 LYZL1Q6UWQ5 148 aa8.52□□□□□ -1.05
CLN6-225ENST00000638144 SH2D6Q7Z4S9 175 aa8.52□□□□□ -1.05
CLN6-225ENST00000638144 RPP21Q9H633 154 aaKnown RBP8.52□□□□□ -1.05
CLN6-225ENST00000638144 F5H697 171 aa8.51□□□□□ -1.05
CLN6-225ENST00000638144 MGPP08493 103 aa8.51□□□□□ -1.05
CLN6-225ENST00000638144 OR10J3Q5JRS4 329 aa8.51□□□□□ -1.05
CLN6-225ENST00000638144 Q8N3U1 123 aa8.51□□□□□ -1.05
CLN6-225ENST00000638144 AP1S3Q96PC3 154 aa8.51□□□□□ -1.05
CLN6-225ENST00000638144 GTSF1LQ9H1H1 148 aa8.51□□□□□ -1.05
CLN6-225ENST00000638144 BIN3Q9NQY0 253 aa8.51□□□□□ -1.05
CLN6-225ENST00000638144 LY96Q9Y6Y9 160 aa8.51□□□□□ -1.05
CLN6-225ENST00000638144 A0A1W2PPQ1 181 aa8.5□□□□□ -1.05
CLN6-225ENST00000638144 XKRY2A2RUG3 117 aa8.5□□□□□ -1.05
CLN6-225ENST00000638144 ZNF727A8MUV8 499 aa8.5□□□□□ -1.05
CLN6-225ENST00000638144 GATCO43716 136 aaKnown RBP8.49□□□□□ -1.05
CLN6-225ENST00000638144 IGHV3-30P01768 117 aa8.49□□□□□ -1.05
CLN6-225ENST00000638144 IGHV3-33P01772 117 aa8.49□□□□□ -1.05
CLN6-225ENST00000638144 IGHV3-30-3P0DP02 117 aa8.49□□□□□ -1.05
CLN6-225ENST00000638144 IGHV3-30-5P0DP03 117 aa8.49□□□□□ -1.05
CLN6-225ENST00000638144 CTRLP40313 264 aa8.49□□□□□ -1.05
CLN6-225ENST00000638144 TIRAPP58753 221 aa8.49□□□□□ -1.05
CLN6-225ENST00000638144 LINC01551Q86U37 167 aa8.49□□□□□ -1.05
CLN6-225ENST00000638144 GTSF1Q8WW33 167 aa8.49□□□□□ -1.05
CLN6-225ENST00000638144 KIF25-AS1Q9Y6Z4 181 aa8.49□□□□□ -1.05
CLN6-225ENST00000638144 TRAV8-6A0A0B4J262 113 aa8.48□□□□□ -1.05
CLN6-225ENST00000638144 IGHV3-38A0A0C4DH36 116 aa8.48□□□□□ -1.05
CLN6-225ENST00000638144 DNAH10OSP0CZ25 163 aa8.48□□□□□ -1.05
CLN6-225ENST00000638144 SMIM17P0DL12 118 aa8.48□□□□□ -1.05
CLN6-225ENST00000638144 EVI2AP22794 236 aa8.48□□□□□ -1.05
CLN6-225ENST00000638144 ERVFC1-1P60608 527 aa8.48□□□□□ -1.05
CLN6-225ENST00000638144 RAB4BP61018 213 aa8.48□□□□□ -1.05
CLN6-225ENST00000638144 LELP1Q5T871 98 aa8.48□□□□□ -1.05
CLN6-225ENST00000638144 NEXN-AS1Q8NBZ9 246 aa8.48□□□□□ -1.05
CLN6-225ENST00000638144 NTF3P20783 257 aa8.47□□□□□ -1.05
CLN6-225ENST00000638144 UBE2D3P61077 147 aa8.47□□□□□ -1.05
CLN6-225ENST00000638144 UBE2D2P62837 147 aa8.47□□□□□ -1.05
CLN6-225ENST00000638144 CACNG7P62955 275 aa8.47□□□□□ -1.05
CLN6-225ENST00000638144 RPL36AP83881 106 aaKnown RBP8.47□□□□□ -1.05
CLN6-225ENST00000638144 Q6ZRN7 208 aaPredicted RBP8.47□□□□□ -1.05
CLN6-225ENST00000638144 RPL36ALQ969Q0 106 aaKnown RBP8.47□□□□□ -1.05
CLN6-225ENST00000638144 DNAH11Q96DT5 4516 aa8.47□□□□□ -1.05
CLN6-225ENST00000638144 F2Z2F3 143 aa8.46□□□□□ -1.06
CLN6-225ENST00000638144 TWIST1Q15672 202 aa8.46□□□□□ -1.06
CLN6-225ENST00000638144 ADIRFQ15847 76 aa8.46□□□□□ -1.06
CLN6-225ENST00000638144 SUMO4Q6EEV6 95 aa8.46□□□□□ -1.06
CLN6-225ENST00000638144 FAM231DQ6ZW35 169 aa8.46□□□□□ -1.06
CLN6-225ENST00000638144 PGLYRP4Q96LB8 373 aa8.46□□□□□ -1.06
CLN6-225ENST00000638144 TRBV7-3A0A075B6L6 115 aa8.45□□□□□ -1.06
CLN6-225ENST00000638144 TRBV10-1A0A0K0K1A3 114 aa8.45□□□□□ -1.06
CLN6-225ENST00000638144 NDUFS6O75380 124 aaKnown RBP8.45□□□□□ -1.06
CLN6-225ENST00000638144 FOXA3P55318 350 aaPredicted RBP8.45□□□□□ -1.06
CLN6-225ENST00000638144 PEA15Q15121 130 aa8.45□□□□□ -1.06
CLN6-225ENST00000638144 LINC01556Q5JQF7 62 aa8.45□□□□□ -1.06
CLN6-225ENST00000638144 Q9HAA7 133 aa8.45□□□□□ -1.06
CLN6-225ENST00000638144 TRAV9-2A0A087WT02 112 aa8.44□□□□□ -1.06
CLN6-225ENST00000638144 A8MWL6 223 aa8.44□□□□□ -1.06
CLN6-225ENST00000638144 TRGC1P0CF51 173 aa8.44□□□□□ -1.06
CLN6-225ENST00000638144 FUSP35637 526 aaKnown RBP eCLIP8.44□□□□□ -1.06
CLN6-225ENST00000638144 RPL23P62829 140 aaKnown RBP8.44□□□□□ -1.06
CLN6-225ENST00000638144 TMEM241Q24JQ0 296 aa8.44□□□□□ -1.06
CLN6-225ENST00000638144 OR10G8Q8NGN5 311 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms