RNA–Protein interactions for RNA: ENST00000636768.1

CACNA1A-230, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,034 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-230ENST00000636768 Q8N1X5 172 aa10.11□□□□□ -0.79
CACNA1A-230ENST00000636768 Q9HAA7 133 aa10.11□□□□□ -0.79
CACNA1A-230ENST00000636768 PHLDA3Q9Y5J5 127 aa10.11□□□□□ -0.79
CACNA1A-230ENST00000636768 EIF5AP63241 154 aaKnown RBP10.1□□□□□ -0.79
CACNA1A-230ENST00000636768 ZNF674Q2M3X9 581 aa10.1□□□□□ -0.79
CACNA1A-230ENST00000636768 LINC01559Q495D7 138 aa10.1□□□□□ -0.79
CACNA1A-230ENST00000636768 DNLZQ5SXM8 178 aa10.1□□□□□ -0.79
CACNA1A-230ENST00000636768 FAM74A4Q5TZK3 123 aa10.1□□□□□ -0.79
CACNA1A-230ENST00000636768 MBD3L1Q8WWY6 194 aa10.1□□□□□ -0.79
CACNA1A-230ENST00000636768 SAMD10Q9BYL1 202 aa10.1□□□□□ -0.79
CACNA1A-230ENST00000636768 SCRT2Q9NQ03 307 aa10.1□□□□□ -0.79
CACNA1A-230ENST00000636768 HSPG2P98160 4391 aa10.1□□□□□ -0.79
CACNA1A-230ENST00000636768 IBA57-AS1B1ANH7 110 aa10.09□□□□□ -0.79
CACNA1A-230ENST00000636768 M0R381 172 aa10.09□□□□□ -0.79
CACNA1A-230ENST00000636768 UFSP1Q6NVU6 142 aa10.09□□□□□ -0.79
CACNA1A-230ENST00000636768 SCO2A0A1W2PP80 73 aa10.08□□□□□ -0.8
CACNA1A-230ENST00000636768 S100A9P06702 114 aaKnown RBP10.08□□□□□ -0.8
CACNA1A-230ENST00000636768 H2AFB1P0C5Y9 115 aa10.08□□□□□ -0.8
CACNA1A-230ENST00000636768 LINC00694P0DN24 101 aa10.08□□□□□ -0.8
CACNA1A-230ENST00000636768 ZFP82Q8N141 532 aa10.08□□□□□ -0.8
CACNA1A-230ENST00000636768 C14orf178Q8N769 122 aaPredicted RBP10.08□□□□□ -0.8
CACNA1A-230ENST00000636768 ABCA13Q86UQ4 5058 aa10.08□□□□□ -0.8
CACNA1A-230ENST00000636768 A0A087WWL8 130 aa10.07□□□□□ -0.8
CACNA1A-230ENST00000636768 SFRP2Q96HF1 295 aa10.07□□□□□ -0.8
CACNA1A-230ENST00000636768 DNAH5Q8TE73 4624 aa10.06□□□□□ -0.8
CACNA1A-230ENST00000636768 A0A087WWC5 75 aa10.06□□□□□ -0.8
CACNA1A-230ENST00000636768 LAGE3Q14657 143 aa10.06□□□□□ -0.8
CACNA1A-230ENST00000636768 TMUB2Q71RG4 321 aa10.06□□□□□ -0.8
CACNA1A-230ENST00000636768 Q9UF83 564 aa10.06□□□□□ -0.8
CACNA1A-230ENST00000636768 KRTAP10-1P60331 282 aa10.05□□□□□ -0.8
CACNA1A-230ENST00000636768 BAGE2Q86Y30 109 aa10.05□□□□□ -0.8
CACNA1A-230ENST00000636768 Q8N3U1 123 aa10.05□□□□□ -0.8
CACNA1A-230ENST00000636768 IGLV5-52A0A0A0MRZ9 124 aa10.04□□□□□ -0.8
CACNA1A-230ENST00000636768 LRCOL1A6NCL2 159 aa10.04□□□□□ -0.8
CACNA1A-230ENST00000636768 GCSHP23434 173 aa10.04□□□□□ -0.8
CACNA1A-230ENST00000636768 RPL19P84098 196 aaKnown RBP10.04□□□□□ -0.8
CACNA1A-230ENST00000636768 PRR27Q6MZM9 219 aa10.04□□□□□ -0.8
CACNA1A-230ENST00000636768 TEX261Q6UWH6 196 aa10.04□□□□□ -0.8
CACNA1A-230ENST00000636768 TM2D2Q9BX73 214 aa10.04□□□□□ -0.8
CACNA1A-230ENST00000636768 TOR2AQ5JU69 321 aa10.03□□□□□ -0.8
CACNA1A-230ENST00000636768 NTN5Q8WTR8 489 aaPredicted RBP10.03□□□□□ -0.8
CACNA1A-230ENST00000636768 MANBALQ9NQG1 85 aa10.03□□□□□ -0.8
CACNA1A-230ENST00000636768 GNG13Q9P2W3 67 aa10.03□□□□□ -0.8
CACNA1A-230ENST00000636768 URGCP-MRPS24S4R325 110 aa10.03□□□□□ -0.8
CACNA1A-230ENST00000636768 APOBP04114 4563 aaKnown RBP10.03□□□□□ -0.8
CACNA1A-230ENST00000636768 TRAV8-3A0A0A6YYJ7 113 aa10.02□□□□□ -0.81
CACNA1A-230ENST00000636768 RAB14P61106 215 aa10.02□□□□□ -0.81
CACNA1A-230ENST00000636768 RPL36AP83881 106 aaKnown RBP10.02□□□□□ -0.81
CACNA1A-230ENST00000636768 EIF5AL1Q6IS14 154 aaKnown RBP10.02□□□□□ -0.81
CACNA1A-230ENST00000636768 DAZ4Q86SG3 579 aaKnown RBP10.02□□□□□ -0.81
CACNA1A-230ENST00000636768 Q8N814 137 aa10.02□□□□□ -0.81
CACNA1A-230ENST00000636768 OR10AG1Q8NH19 301 aa10.02□□□□□ -0.81
CACNA1A-230ENST00000636768 RPL36ALQ969Q0 106 aaKnown RBP10.02□□□□□ -0.81
CACNA1A-230ENST00000636768 MLST8Q9BVC4 326 aa10.02□□□□□ -0.81
CACNA1A-230ENST00000636768 DAZ3Q9NR90 486 aaKnown RBP10.02□□□□□ -0.81
CACNA1A-230ENST00000636768 TRBV10-1A0A0K0K1A3 114 aa10.01□□□□□ -0.81
CACNA1A-230ENST00000636768 LINC00862A6NCI5 91 aa10.01□□□□□ -0.81
CACNA1A-230ENST00000636768 EPM2AB3EWF7 344 aa10.01□□□□□ -0.81
CACNA1A-230ENST00000636768 CXCL1P09341 107 aa10.01□□□□□ -0.81
CACNA1A-230ENST00000636768 RPL35P42766 123 aaKnown RBP10.01□□□□□ -0.81
CACNA1A-230ENST00000636768 RAB5CP51148 216 aa10.01□□□□□ -0.81
CACNA1A-230ENST00000636768 XGP55808 180 aa10.01□□□□□ -0.81
CACNA1A-230ENST00000636768 ZNF56Q15929 161 aa10.01□□□□□ -0.81
CACNA1A-230ENST00000636768 MUC21A0A0G2JKD1 596 aa10□□□□□ -0.81
CACNA1A-230ENST00000636768 MUC21A0A140T8X8 626 aa10□□□□□ -0.81
CACNA1A-230ENST00000636768 TEX46H3BTG2 121 aa10□□□□□ -0.81
CACNA1A-230ENST00000636768 CCL20P78556 96 aa10□□□□□ -0.81
CACNA1A-230ENST00000636768 CLLU1Q5K131 121 aa10□□□□□ -0.81
CACNA1A-230ENST00000636768 SPANXN1Q5VSR9 72 aa10□□□□□ -0.81
CACNA1A-230ENST00000636768 KCNIP4Q6PIL6 250 aa10□□□□□ -0.81
CACNA1A-230ENST00000636768 TRBV7-3A0A075B6L6 115 aa9.99□□□□□ -0.81
CACNA1A-230ENST00000636768 TRAV1-1A0A0B4J248 108 aa9.99□□□□□ -0.81
CACNA1A-230ENST00000636768 RAB4BP61018 213 aa9.99□□□□□ -0.81
CACNA1A-230ENST00000636768 NIT1Q86X76 327 aa9.99□□□□□ -0.81
CACNA1A-230ENST00000636768 C11orf52Q96A22 123 aa9.99□□□□□ -0.81
CACNA1A-230ENST00000636768 DERL1Q9BUN8 251 aa9.99□□□□□ -0.81
CACNA1A-230ENST00000636768 A0A087WX48 190 aa9.98□□□□□ -0.81
CACNA1A-230ENST00000636768 SNAI2O43623 268 aa9.98□□□□□ -0.81
CACNA1A-230ENST00000636768 OR5AL1P0C617 328 aa9.98□□□□□ -0.81
CACNA1A-230ENST00000636768 UBE2D3P61077 147 aa9.98□□□□□ -0.81
CACNA1A-230ENST00000636768 SSTP61278 116 aa9.98□□□□□ -0.81
CACNA1A-230ENST00000636768 UBE2D2P62837 147 aa9.98□□□□□ -0.81
CACNA1A-230ENST00000636768 CENPWQ5EE01 88 aa9.98□□□□□ -0.81
CACNA1A-230ENST00000636768 RMI2Q96E14 147 aa9.98□□□□□ -0.81
CACNA1A-230ENST00000636768 F5H697 171 aa9.97□□□□□ -0.81
CACNA1A-230ENST00000636768 LECT2O14960 151 aa9.97□□□□□ -0.81
CACNA1A-230ENST00000636768 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.97□□□□□ -0.81
CACNA1A-230ENST00000636768 FRZBQ92765 325 aa9.97□□□□□ -0.81
CACNA1A-230ENST00000636768 SSBP4Q9BWG4 385 aaPredicted RBP9.97□□□□□ -0.81
CACNA1A-230ENST00000636768 KLK12Q9UKR0 248 aa9.97□□□□□ -0.81
CACNA1A-230ENST00000636768 COX11Q9Y6N1 276 aa9.97□□□□□ -0.81
CACNA1A-230ENST00000636768 IFNA1P01562 189 aa9.96□□□□□ -0.82
CACNA1A-230ENST00000636768 SMIM17P0DL12 118 aa9.96□□□□□ -0.82
CACNA1A-230ENST00000636768 SULT1A2P50226 295 aa9.96□□□□□ -0.82
CACNA1A-230ENST00000636768 HAMPP81172 84 aa9.96□□□□□ -0.82
CACNA1A-230ENST00000636768 WFDC2Q14508 124 aa9.96□□□□□ -0.82
CACNA1A-230ENST00000636768 ELOBQ15370 118 aa9.96□□□□□ -0.82
CACNA1A-230ENST00000636768 NEXN-AS1Q8NBZ9 246 aa9.96□□□□□ -0.82
CACNA1A-230ENST00000636768 OR10G8Q8NGN5 311 aa9.96□□□□□ -0.82
CACNA1A-230ENST00000636768 DAZAP1Q96EP5 407 aaKnown RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms