RNA–Protein interactions for RNA: ENST00000634429.1

SMUG1-223, Transcript of single-strand-selective monofunctional uracil-DNA glycosylase 1, human

TSL 5

Gene SMUG1, Length 1,093 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMUG1-223	ENST00000634429	GAGE4	Q13068	117 aa		13.54	□□□□□ -0.24
SMUG1-223	ENST00000634429	GAGE5	Q13069	117 aa		13.54	□□□□□ -0.24
SMUG1-223	ENST00000634429	GAGE13	Q4V321	117 aa		13.54	□□□□□ -0.24
SMUG1-223	ENST00000634429	TRAV8-3	A0A0A6YYJ7	113 aa		13.53	□□□□□ -0.24
SMUG1-223	ENST00000634429		Q6ZSN1	163 aa		13.53	□□□□□ -0.24
SMUG1-223	ENST00000634429	TMUB2	Q71RG4	321 aa		13.53	□□□□□ -0.24
SMUG1-223	ENST00000634429	BAGE2	Q86Y30	109 aa		13.53	□□□□□ -0.24
SMUG1-223	ENST00000634429	MANBAL	Q9NQG1	85 aa		13.53	□□□□□ -0.24
SMUG1-223	ENST00000634429		M0R381	172 aa		13.52	□□□□□ -0.25
SMUG1-223	ENST00000634429	FAM74A4	Q5TZK3	123 aa		13.52	□□□□□ -0.25
SMUG1-223	ENST00000634429	MLST8	Q9BVC4	326 aa		13.52	□□□□□ -0.25
SMUG1-223	ENST00000634429	SAMD10	Q9BYL1	202 aa		13.52	□□□□□ -0.25
SMUG1-223	ENST00000634429	TMSB15B	A0A087X1C1	80 aa		13.51	□□□□□ -0.25
SMUG1-223	ENST00000634429	TRAV1-1	A0A0B4J248	108 aa		13.51	□□□□□ -0.25
SMUG1-223	ENST00000634429	IGHV3-30	P01768	117 aa		13.51	□□□□□ -0.25
SMUG1-223	ENST00000634429	IGHV3-33	P01772	117 aa		13.51	□□□□□ -0.25
SMUG1-223	ENST00000634429	IGHV3-30-3	P0DP02	117 aa		13.51	□□□□□ -0.25
SMUG1-223	ENST00000634429	IGHV3-30-5	P0DP03	117 aa		13.51	□□□□□ -0.25
SMUG1-223	ENST00000634429	JPT2	Q9H910	190 aa		13.51	□□□□□ -0.25
SMUG1-223	ENST00000634429	COX11	Q9Y6N1	276 aa		13.51	□□□□□ -0.25
SMUG1-223	ENST00000634429	URGCP-MRPS24	S4R325	110 aa		13.51	□□□□□ -0.25
SMUG1-223	ENST00000634429	SCO2	A0A1W2PP80	73 aa		13.5	□□□□□ -0.25
SMUG1-223	ENST00000634429	RPL36A	P83881	106 aa	Known RBP	13.5	□□□□□ -0.25
SMUG1-223	ENST00000634429	C14orf178	Q8N769	122 aa	Predicted RBP	13.5	□□□□□ -0.25
SMUG1-223	ENST00000634429	RPL36AL	Q969Q0	106 aa	Known RBP	13.5	□□□□□ -0.25
SMUG1-223	ENST00000634429		A0A1B0GV50	99 aa		13.49	□□□□□ -0.25
SMUG1-223	ENST00000634429	GCSH	P23434	173 aa		13.49	□□□□□ -0.25
SMUG1-223	ENST00000634429	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	13.49	□□□□□ -0.25
SMUG1-223	ENST00000634429	CHCHD7	Q9BUK0	85 aa		13.49	□□□□□ -0.25
SMUG1-223	ENST00000634429		Q9HAA7	133 aa		13.49	□□□□□ -0.25
SMUG1-223	ENST00000634429	APOB	P04114	4563 aa	Known RBP	13.49	□□□□□ -0.25
SMUG1-223	ENST00000634429	LRCOL1	A6NCL2	159 aa		13.48	□□□□□ -0.25
SMUG1-223	ENST00000634429	KCNIP4	Q6PIL6	250 aa		13.48	□□□□□ -0.25
SMUG1-223	ENST00000634429	RMI2	Q96E14	147 aa		13.48	□□□□□ -0.25
SMUG1-223	ENST00000634429	ABCA13	Q86UQ4	5058 aa		13.48	□□□□□ -0.25
SMUG1-223	ENST00000634429	TRBV7-3	A0A075B6L6	115 aa		13.47	□□□□□ -0.25
SMUG1-223	ENST00000634429		A0A087WWL8	130 aa		13.47	□□□□□ -0.25
SMUG1-223	ENST00000634429	OR5AL1	P0C617	328 aa		13.47	□□□□□ -0.25
SMUG1-223	ENST00000634429	RAB4B	P61018	213 aa		13.47	□□□□□ -0.25
SMUG1-223	ENST00000634429	ELOB	Q15370	118 aa		13.47	□□□□□ -0.25
SMUG1-223	ENST00000634429	C11orf52	Q96A22	123 aa		13.47	□□□□□ -0.25
SMUG1-223	ENST00000634429	SMIM12	Q96EX1	92 aa		13.47	□□□□□ -0.25
SMUG1-223	ENST00000634429	SSBP4	Q9BWG4	385 aa	Predicted RBP	13.47	□□□□□ -0.25
SMUG1-223	ENST00000634429	KRTAP4-5	Q9BYR2	181 aa		13.47	□□□□□ -0.25
SMUG1-223	ENST00000634429	IGLV5-52	A0A0A0MRZ9	124 aa		13.46	□□□□□ -0.25
SMUG1-223	ENST00000634429	SNAI2	O43623	268 aa		13.46	□□□□□ -0.25
SMUG1-223	ENST00000634429	RPL35	P42766	123 aa	Known RBP	13.46	□□□□□ -0.25
SMUG1-223	ENST00000634429	GNG13	Q9P2W3	67 aa		13.46	□□□□□ -0.25
SMUG1-223	ENST00000634429	IFNA1	P01562	189 aa		13.45	□□□□□ -0.26
SMUG1-223	ENST00000634429	SPANXN1	Q5VSR9	72 aa		13.45	□□□□□ -0.26
SMUG1-223	ENST00000634429	TCTE3	Q8IZS6	198 aa		13.45	□□□□□ -0.26
SMUG1-223	ENST00000634429		Q8N814	137 aa		13.45	□□□□□ -0.26
SMUG1-223	ENST00000634429	OR10G8	Q8NGN5	311 aa		13.45	□□□□□ -0.26
SMUG1-223	ENST00000634429	PDE6D	O43924	150 aa		13.44	□□□□□ -0.26
SMUG1-223	ENST00000634429	PKIA	P61925	76 aa		13.44	□□□□□ -0.26
SMUG1-223	ENST00000634429	PRR27	Q6MZM9	219 aa		13.44	□□□□□ -0.26
SMUG1-223	ENST00000634429	DAZAP1	Q96EP5	407 aa	Known RBP	13.44	□□□□□ -0.26
SMUG1-223	ENST00000634429	BIN3	Q9NQY0	253 aa		13.44	□□□□□ -0.26
SMUG1-223	ENST00000634429		A0A087WX48	190 aa		13.43	□□□□□ -0.26
SMUG1-223	ENST00000634429	EPM2A	B3EWF7	344 aa		13.43	□□□□□ -0.26
SMUG1-223	ENST00000634429	SMIM17	P0DL12	118 aa		13.43	□□□□□ -0.26
SMUG1-223	ENST00000634429	TAGLN2	P37802	199 aa	Known RBP	13.43	□□□□□ -0.26
SMUG1-223	ENST00000634429	SULT1A2	P50226	295 aa		13.43	□□□□□ -0.26
SMUG1-223	ENST00000634429	RPS20	P60866	119 aa	Known RBP	13.43	□□□□□ -0.26
SMUG1-223	ENST00000634429	UBE2D3	P61077	147 aa		13.43	□□□□□ -0.26
SMUG1-223	ENST00000634429	UBE2D2	P62837	147 aa		13.43	□□□□□ -0.26
SMUG1-223	ENST00000634429	NIT1	Q86X76	327 aa		13.43	□□□□□ -0.26
SMUG1-223	ENST00000634429	TMEM70	Q9BUB7	260 aa		13.43	□□□□□ -0.26
SMUG1-223	ENST00000634429	KRTAP10-1	P60331	282 aa		13.42	□□□□□ -0.26
SMUG1-223	ENST00000634429	ZNF56	Q15929	161 aa		13.42	□□□□□ -0.26
SMUG1-223	ENST00000634429	TMEM97	Q5BJF2	176 aa		13.42	□□□□□ -0.26
SMUG1-223	ENST00000634429	SLC51B	Q86UW2	128 aa		13.42	□□□□□ -0.26
SMUG1-223	ENST00000634429	OR10AG1	Q8NH19	301 aa		13.42	□□□□□ -0.26
SMUG1-223	ENST00000634429		Q9UF83	564 aa		13.42	□□□□□ -0.26
SMUG1-223	ENST00000634429	XKRY2	A2RUG3	117 aa		13.41	□□□□□ -0.26
SMUG1-223	ENST00000634429	C1QB	P02746	253 aa		13.41	□□□□□ -0.26
SMUG1-223	ENST00000634429	XG	P55808	180 aa		13.41	□□□□□ -0.26
SMUG1-223	ENST00000634429	CCL20	P78556	96 aa		13.41	□□□□□ -0.26
SMUG1-223	ENST00000634429	RPL19	P84098	196 aa	Known RBP	13.41	□□□□□ -0.26
SMUG1-223	ENST00000634429	MEF2B	Q02080	365 aa	Predicted RBP	13.41	□□□□□ -0.26
SMUG1-223	ENST00000634429	DAZ4	Q86SG3	579 aa	Known RBP	13.41	□□□□□ -0.26
SMUG1-223	ENST00000634429	AP1S3	Q96PC3	154 aa		13.41	□□□□□ -0.26
SMUG1-223	ENST00000634429	DAZ3	Q9NR90	486 aa	Known RBP	13.41	□□□□□ -0.26
SMUG1-223	ENST00000634429	FUS	P35637	526 aa	Known RBP eCLIP	13.4	□□□□□ -0.26
SMUG1-223	ENST00000634429	FRZB	Q92765	325 aa		13.4	□□□□□ -0.26
SMUG1-223	ENST00000634429	GNG4	P50150	75 aa		13.39	□□□□□ -0.27
SMUG1-223	ENST00000634429		Q0VG73	95 aa		13.39	□□□□□ -0.27
SMUG1-223	ENST00000634429	CENPW	Q5EE01	88 aa		13.39	□□□□□ -0.27
SMUG1-223	ENST00000634429	TRBV6-8	A0A0A6YYG3	113 aa		13.38	□□□□□ -0.27
SMUG1-223	ENST00000634429	RBFOX3	A6NFN3	312 aa		13.38	□□□□□ -0.27
SMUG1-223	ENST00000634429		F5H697	171 aa		13.38	□□□□□ -0.27
SMUG1-223	ENST00000634429		F2Z2F3	143 aa		13.37	□□□□□ -0.27
SMUG1-223	ENST00000634429	CACNG7	P62955	275 aa		13.37	□□□□□ -0.27
SMUG1-223	ENST00000634429	DERL1	Q9BUN8	251 aa		13.37	□□□□□ -0.27
SMUG1-223	ENST00000634429	VAX2	Q9UIW0	290 aa		13.37	□□□□□ -0.27
SMUG1-223	ENST00000634429		H7C1H1	209 aa		13.36	□□□□□ -0.27
SMUG1-223	ENST00000634429	BCL2	P10415	239 aa		13.36	□□□□□ -0.27
SMUG1-223	ENST00000634429		Q8N3U1	123 aa		13.36	□□□□□ -0.27
SMUG1-223	ENST00000634429		Q8N976	141 aa		13.36	□□□□□ -0.27
SMUG1-223	ENST00000634429	FER1L6-AS1	Q8NA97	138 aa		13.36	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms