RNA–Protein interactions for RNA: ENST00000634403.1

SMARCA2-222, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 2

Gene SMARCA2, Length 497 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-222	ENST00000634403	PMCHL1	Q16048	86 aa		3.98	□□□□□ -1.77
SMARCA2-222	ENST00000634403	DEFB136	Q30KP8	78 aa		3.98	□□□□□ -1.77
SMARCA2-222	ENST00000634403	DEFB114	Q30KQ6	69 aa		3.98	□□□□□ -1.77
SMARCA2-222	ENST00000634403	TDRG1	Q3Y452	100 aa		3.98	□□□□□ -1.77
SMARCA2-222	ENST00000634403	SPANXN1	Q5VSR9	72 aa		3.98	□□□□□ -1.77
SMARCA2-222	ENST00000634403	PET117	Q6UWS5	81 aa		3.98	□□□□□ -1.77
SMARCA2-222	ENST00000634403	AMTN	Q6UX39	209 aa		3.98	□□□□□ -1.77
SMARCA2-222	ENST00000634403	POM121L12	Q8N7R1	296 aa		3.98	□□□□□ -1.77
SMARCA2-222	ENST00000634403	KLHL30-AS1	Q8NEE0	82 aa		3.98	□□□□□ -1.77
SMARCA2-222	ENST00000634403	LINC01006	Q8NI28	216 aa		3.98	□□□□□ -1.77
SMARCA2-222	ENST00000634403	DLX4	Q92988	240 aa	Predicted RBP	3.98	□□□□□ -1.77
SMARCA2-222	ENST00000634403	MRAP2	Q96G30	205 aa		3.98	□□□□□ -1.77
SMARCA2-222	ENST00000634403	TMEM70	Q9BUB7	260 aa		3.98	□□□□□ -1.77
SMARCA2-222	ENST00000634403	MAP1LC3A	Q9H492	121 aa		3.98	□□□□□ -1.77
SMARCA2-222	ENST00000634403	HSPB8	Q9UJY1	196 aa		3.98	□□□□□ -1.77
SMARCA2-222	ENST00000634403	SELENOK	Q9Y6D0	94 aa		3.98	□□□□□ -1.77
SMARCA2-222	ENST00000634403	COL12A1	Q99715	3063 aa		3.98	□□□□□ -1.77
SMARCA2-222	ENST00000634403	ANKRD17	O75179	2603 aa	Known RBP	3.97	□□□□□ -1.77
SMARCA2-222	ENST00000634403	IGLV2-18	A0A075B6J9	118 aa		3.97	□□□□□ -1.77
SMARCA2-222	ENST00000634403		A0A096LNJ9	63 aa		3.97	□□□□□ -1.77
SMARCA2-222	ENST00000634403	LOC389332	A0A1B0GUA5	103 aa		3.97	□□□□□ -1.77
SMARCA2-222	ENST00000634403	C20orf202	A1L168	122 aa		3.97	□□□□□ -1.77
SMARCA2-222	ENST00000634403	SMKR1	H3BMG3	65 aa		3.97	□□□□□ -1.77
SMARCA2-222	ENST00000634403	SYS1-DBNDD2	H3BUS1	97 aa		3.97	□□□□□ -1.77
SMARCA2-222	ENST00000634403	GNRH2	O43555	120 aa		3.97	□□□□□ -1.77
SMARCA2-222	ENST00000634403	CD28	P10747	220 aa		3.97	□□□□□ -1.77
SMARCA2-222	ENST00000634403	EVI2A	P22794	236 aa		3.97	□□□□□ -1.77
SMARCA2-222	ENST00000634403	S100A4	P26447	101 aa	Known RBP	3.97	□□□□□ -1.77
SMARCA2-222	ENST00000634403	CDKN1B	P46527	198 aa		3.97	□□□□□ -1.77
SMARCA2-222	ENST00000634403	FAM159A	Q6UWV7	190 aa		3.97	□□□□□ -1.77
SMARCA2-222	ENST00000634403	LINC00173	Q6ZV60	143 aa		3.97	□□□□□ -1.77
SMARCA2-222	ENST00000634403	SPATA12	Q7Z6I5	190 aa		3.97	□□□□□ -1.77
SMARCA2-222	ENST00000634403		Q8N8P6	123 aa		3.97	□□□□□ -1.77
SMARCA2-222	ENST00000634403	OR2K2	Q8NGT1	345 aa		3.97	□□□□□ -1.77
SMARCA2-222	ENST00000634403	NDUFAF3	Q9BU61	184 aa		3.97	□□□□□ -1.77
SMARCA2-222	ENST00000634403	VAMP8	Q9BV40	100 aa		3.97	□□□□□ -1.77
SMARCA2-222	ENST00000634403	MAP1LC3C	Q9BXW4	147 aa		3.97	□□□□□ -1.77
SMARCA2-222	ENST00000634403	DPH3P1	Q9H4G8	78 aa		3.97	□□□□□ -1.77
SMARCA2-222	ENST00000634403	NXT2	Q9NPJ8	142 aa	Known RBP	3.97	□□□□□ -1.77
SMARCA2-222	ENST00000634403	PHLDA3	Q9Y5J5	127 aa		3.97	□□□□□ -1.77
SMARCA2-222	ENST00000634403	TSSC4	Q9Y5U2	329 aa	Predicted RBP	3.97	□□□□□ -1.77
SMARCA2-222	ENST00000634403	FAM208B	Q5VWN6	2430 aa		3.97	□□□□□ -1.77
SMARCA2-222	ENST00000634403	UTP20	O75691	2785 aa	Known RBP	3.97	□□□□□ -1.77
SMARCA2-222	ENST00000634403	CSPG4	Q6UVK1	2322 aa		3.96	□□□□□ -1.77
SMARCA2-222	ENST00000634403	ZFYVE26	Q68DK2	2539 aa		3.96	□□□□□ -1.77
SMARCA2-222	ENST00000634403	MYO18B	Q8IUG5	2567 aa		3.96	□□□□□ -1.78
SMARCA2-222	ENST00000634403	IGHV1OR15-1	A0A075B7D0	117 aa		3.96	□□□□□ -1.78
SMARCA2-222	ENST00000634403	TRAV9-2	A0A087WT02	112 aa		3.96	□□□□□ -1.78
SMARCA2-222	ENST00000634403	TRAV12-3	A0A0B4J271	114 aa		3.96	□□□□□ -1.78
SMARCA2-222	ENST00000634403	IGHV3-16	A0A0C4DH30	117 aa		3.96	□□□□□ -1.78
SMARCA2-222	ENST00000634403		H3BMM0	161 aa		3.96	□□□□□ -1.78
SMARCA2-222	ENST00000634403		M0R381	172 aa		3.96	□□□□□ -1.78
SMARCA2-222	ENST00000634403	CCL24	O00175	119 aa		3.96	□□□□□ -1.78
SMARCA2-222	ENST00000634403	GAS8-AS1	O95177	125 aa		3.96	□□□□□ -1.78
SMARCA2-222	ENST00000634403	LY6G6D	O95868	133 aa		3.96	□□□□□ -1.78
SMARCA2-222	ENST00000634403	NCR2	O95944	276 aa		3.96	□□□□□ -1.78
SMARCA2-222	ENST00000634403	HLA-DRB4	P13762	266 aa		3.96	□□□□□ -1.78
SMARCA2-222	ENST00000634403	FCER1G	P30273	86 aa		3.96	□□□□□ -1.78
SMARCA2-222	ENST00000634403	DEFB131A	P59861	70 aa		3.96	□□□□□ -1.78
SMARCA2-222	ENST00000634403	DEFA6	Q01524	100 aa		3.96	□□□□□ -1.78
SMARCA2-222	ENST00000634403	LINC01545	Q5VT33	79 aa		3.96	□□□□□ -1.78
SMARCA2-222	ENST00000634403	TMEM61	Q8N0U2	210 aa		3.96	□□□□□ -1.78
SMARCA2-222	ENST00000634403	DYNLRB2	Q8TF09	96 aa		3.96	□□□□□ -1.78
SMARCA2-222	ENST00000634403	C14orf144	Q96I85	54 aa		3.96	□□□□□ -1.78
SMARCA2-222	ENST00000634403	C9orf85	Q96MD7	179 aa		3.96	□□□□□ -1.78
SMARCA2-222	ENST00000634403	DUX3	Q96PT4	197 aa		3.96	□□□□□ -1.78
SMARCA2-222	ENST00000634403	SPAG8	Q99932	426 aa	Predicted RBP	3.96	□□□□□ -1.78
SMARCA2-222	ENST00000634403	MIEN1	Q9BRT3	115 aa		3.96	□□□□□ -1.78
SMARCA2-222	ENST00000634403	KIF25-AS1	Q9Y6Z4	181 aa		3.96	□□□□□ -1.78
SMARCA2-222	ENST00000634403	HLA-DRB4	X5D2U9	266 aa		3.96	□□□□□ -1.78
SMARCA2-222	ENST00000634403	ASH1L	Q9NR48	2969 aa	Known RBP	3.95	□□□□□ -1.78
SMARCA2-222	ENST00000634403	USP9Y	O00507	2555 aa	Predicted RBP	3.95	□□□□□ -1.78
SMARCA2-222	ENST00000634403	IGLV5-45	A0A087WSX0	123 aa		3.95	□□□□□ -1.78
SMARCA2-222	ENST00000634403	OR4C46	A6NHA9	309 aa		3.95	□□□□□ -1.78
SMARCA2-222	ENST00000634403	KNCN	A6PVL3	124 aa		3.95	□□□□□ -1.78
SMARCA2-222	ENST00000634403	PPP1R17	O96001	155 aa		3.95	□□□□□ -1.78
SMARCA2-222	ENST00000634403	HBD	P02042	147 aa		3.95	□□□□□ -1.78
SMARCA2-222	ENST00000634403	CD7	P09564	240 aa		3.95	□□□□□ -1.78
SMARCA2-222	ENST00000634403	GATA1	P15976	413 aa	Predicted RBP	3.95	□□□□□ -1.78
SMARCA2-222	ENST00000634403	CMC4	P56277	68 aa	Predicted RBP	3.95	□□□□□ -1.78
SMARCA2-222	ENST00000634403	LINC00315	P59091	139 aa		3.95	□□□□□ -1.78
SMARCA2-222	ENST00000634403	RPL32	P62910	135 aa	Known RBP	3.95	□□□□□ -1.78
SMARCA2-222	ENST00000634403	RPL36A	P83881	106 aa	Known RBP	3.95	□□□□□ -1.78
SMARCA2-222	ENST00000634403	GAGE5	Q13069	117 aa		3.95	□□□□□ -1.78
SMARCA2-222	ENST00000634403	GAGE6	Q13070	117 aa		3.95	□□□□□ -1.78
SMARCA2-222	ENST00000634403	SPINK13	Q1W4C9	94 aa		3.95	□□□□□ -1.78
SMARCA2-222	ENST00000634403	SPATA45	Q537H7	98 aa		3.95	□□□□□ -1.78
SMARCA2-222	ENST00000634403	MRPL52	Q86TS9	123 aa	Known RBP	3.95	□□□□□ -1.78
SMARCA2-222	ENST00000634403	PTH2	Q96A98	100 aa		3.95	□□□□□ -1.78
SMARCA2-222	ENST00000634403	AP1S3	Q96PC3	154 aa		3.95	□□□□□ -1.78
SMARCA2-222	ENST00000634403	CITED2	Q99967	270 aa	Predicted RBP	3.95	□□□□□ -1.78
SMARCA2-222	ENST00000634403	C20orf78	Q9BR46	151 aa		3.95	□□□□□ -1.78
SMARCA2-222	ENST00000634403	LINC00467	Q9BRT7	94 aa		3.95	□□□□□ -1.78
SMARCA2-222	ENST00000634403	ZNF256	Q9Y2P7	627 aa	Predicted RBP	3.95	□□□□□ -1.78
SMARCA2-222	ENST00000634403	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	3.95	□□□□□ -1.78
SMARCA2-222	ENST00000634403	DOPEY2	Q9Y3R5	2298 aa		3.95	□□□□□ -1.78
SMARCA2-222	ENST00000634403	PTPN13	Q12923	2485 aa		3.94	□□□□□ -1.78
SMARCA2-222	ENST00000634403	TRAV12-2	A0A075B6T6	113 aa		3.94	□□□□□ -1.78
SMARCA2-222	ENST00000634403	RBMY1B	A6NDE4	496 aa	Known RBP	3.94	□□□□□ -1.78
SMARCA2-222	ENST00000634403	RBMY1E	A6NEQ0	496 aa	Known RBP	3.94	□□□□□ -1.78

Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms