RNA–Protein interactions for RNA: ENST00000628979.2

CIRBP-246, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2 BASIC

Gene CIRBP, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-246ENST00000628979 CXCL1P09341 107 aa14.09□□□□□ -0.15
CIRBP-246ENST00000628979 ATP6V0E2Q8NHE4 81 aa14.09□□□□□ -0.15
CIRBP-246ENST00000628979 CRYGDP07320 174 aa14.08□□□□□ -0.16
CIRBP-246ENST00000628979 GZMBP10144 247 aa14.08□□□□□ -0.16
CIRBP-246ENST00000628979 LINC00315P59091 139 aa14.08□□□□□ -0.16
CIRBP-246ENST00000628979 OR10J3Q5JRS4 329 aa14.08□□□□□ -0.16
CIRBP-246ENST00000628979 SPANXN1Q5VSR9 72 aa14.08□□□□□ -0.16
CIRBP-246ENST00000628979 OR2D3Q8NGH3 330 aa14.08□□□□□ -0.16
CIRBP-246ENST00000628979 Q9UF83 564 aa14.08□□□□□ -0.16
CIRBP-246ENST00000628979 TRBV20OR9-2A0A075B6H5 130 aa14.07□□□□□ -0.16
CIRBP-246ENST00000628979 TRAV9-2A0A087WT02 112 aa14.07□□□□□ -0.16
CIRBP-246ENST00000628979 SMIM12Q96EX1 92 aa14.07□□□□□ -0.16
CIRBP-246ENST00000628979 TPPP3Q9BW30 176 aa14.07□□□□□ -0.16
CIRBP-246ENST00000628979 TRAV8-6A0A0B4J262 113 aa14.06□□□□□ -0.16
CIRBP-246ENST00000628979 SNAI2O43623 268 aa14.06□□□□□ -0.16
CIRBP-246ENST00000628979 P01737 135 aa14.06□□□□□ -0.16
CIRBP-246ENST00000628979 EVI2AP22794 236 aa14.06□□□□□ -0.16
CIRBP-246ENST00000628979 CEBPGP53567 150 aa14.06□□□□□ -0.16
CIRBP-246ENST00000628979 TIRAPP58753 221 aa14.06□□□□□ -0.16
CIRBP-246ENST00000628979 SSBP4Q9BWG4 385 aaPredicted RBP14.06□□□□□ -0.16
CIRBP-246ENST00000628979 GTSF1LQ9H1H1 148 aa14.06□□□□□ -0.16
CIRBP-246ENST00000628979 TNFRSF18Q9Y5U5 241 aa14.06□□□□□ -0.16
CIRBP-246ENST00000628979 C19orf71A6NCJ1 209 aa14.05□□□□□ -0.16
CIRBP-246ENST00000628979 OR5AL1P0C617 328 aa14.05□□□□□ -0.16
CIRBP-246ENST00000628979 LYPD6BQ8NI32 183 aa14.05□□□□□ -0.16
CIRBP-246ENST00000628979 BIN3Q9NQY0 253 aa14.05□□□□□ -0.16
CIRBP-246ENST00000628979 RPS20P60866 119 aaKnown RBP14.04□□□□□ -0.16
CIRBP-246ENST00000628979 TOR2AQ5JU69 321 aa14.04□□□□□ -0.16
CIRBP-246ENST00000628979 EIF5A2Q9GZV4 153 aaKnown RBP14.04□□□□□ -0.16
CIRBP-246ENST00000628979 PKD1P98161 4303 aa14.03□□□□□ -0.16
CIRBP-246ENST00000628979 DNAH10OSP0CZ25 163 aa14.03□□□□□ -0.16
CIRBP-246ENST00000628979 ZNF56Q15929 161 aa14.03□□□□□ -0.16
CIRBP-246ENST00000628979 LELP1Q5T871 98 aa14.03□□□□□ -0.16
CIRBP-246ENST00000628979 FER1L6-AS1Q8NA97 138 aa14.03□□□□□ -0.16
CIRBP-246ENST00000628979 OCC1Q8TAD7 63 aa14.03□□□□□ -0.16
CIRBP-246ENST00000628979 IGHV3-38A0A0C4DH36 116 aa14.02□□□□□ -0.17
CIRBP-246ENST00000628979 BTF3P20290 206 aaKnown RBP14.02□□□□□ -0.17
CIRBP-246ENST00000628979 NUDT10Q8NFP7 164 aa14.02□□□□□ -0.17
CIRBP-246ENST00000628979 NUDT11Q96G61 164 aa14.02□□□□□ -0.17
CIRBP-246ENST00000628979 XKRY2A2RUG3 117 aa14.01□□□□□ -0.17
CIRBP-246ENST00000628979 F5H697 171 aa14.01□□□□□ -0.17
CIRBP-246ENST00000628979 TMEM250H0YL14 139 aa14.01□□□□□ -0.17
CIRBP-246ENST00000628979 IGHV3-30P01768 117 aa14.01□□□□□ -0.17
CIRBP-246ENST00000628979 IGHV3-33P01772 117 aa14.01□□□□□ -0.17
CIRBP-246ENST00000628979 LINC00694P0DN24 101 aa14.01□□□□□ -0.17
CIRBP-246ENST00000628979 IGHV3-30-3P0DP02 117 aa14.01□□□□□ -0.17
CIRBP-246ENST00000628979 IGHV3-30-5P0DP03 117 aa14.01□□□□□ -0.17
CIRBP-246ENST00000628979 K7EN84 100 aa14□□□□□ -0.17
CIRBP-246ENST00000628979 IGLC6P0CF74 106 aa14□□□□□ -0.17
CIRBP-246ENST00000628979 SMIM17P0DL12 118 aa14□□□□□ -0.17
CIRBP-246ENST00000628979 RAB4BP61018 213 aa14□□□□□ -0.17
CIRBP-246ENST00000628979 RNASE7Q9H1E1 156 aaKnown RBP14□□□□□ -0.17
CIRBP-246ENST00000628979 MSRB1Q9NZV6 116 aa14□□□□□ -0.17
CIRBP-246ENST00000628979 RPL36AP83881 106 aaKnown RBP13.98□□□□□ -0.17
CIRBP-246ENST00000628979 LINC01556Q5JQF7 62 aa13.98□□□□□ -0.17
CIRBP-246ENST00000628979 LYZL1Q6UWQ5 148 aa13.98□□□□□ -0.17
CIRBP-246ENST00000628979 NFE4Q86UQ8 179 aa13.98□□□□□ -0.17
CIRBP-246ENST00000628979 C10orf126Q8N4M7 172 aa13.98□□□□□ -0.17
CIRBP-246ENST00000628979 RPL36ALQ969Q0 106 aaKnown RBP13.98□□□□□ -0.17
CIRBP-246ENST00000628979 FAM210AQ96ND0 272 aa13.98□□□□□ -0.17
CIRBP-246ENST00000628979 AP1S3Q96PC3 154 aa13.98□□□□□ -0.17
CIRBP-246ENST00000628979 TRBV10-1A0A0K0K1A3 114 aa13.97□□□□□ -0.17
CIRBP-246ENST00000628979 K7EP13 123 aa13.97□□□□□ -0.17
CIRBP-246ENST00000628979 CACNG7P62955 275 aa13.97□□□□□ -0.17
CIRBP-246ENST00000628979 Q6ZRN7 208 aaPredicted RBP13.97□□□□□ -0.17
CIRBP-246ENST00000628979 RPP21Q9H633 154 aaKnown RBP13.97□□□□□ -0.17
CIRBP-246ENST00000628979 MGPP08493 103 aa13.96□□□□□ -0.17
CIRBP-246ENST00000628979 PKHD1P08F94 4074 aa13.95□□□□□ -0.18
CIRBP-246ENST00000628979 TRBV7-3A0A075B6L6 115 aa13.95□□□□□ -0.18
CIRBP-246ENST00000628979 F2Z2F3 143 aa13.95□□□□□ -0.18
CIRBP-246ENST00000628979 SPATA12Q7Z6I5 190 aa13.95□□□□□ -0.18
CIRBP-246ENST00000628979 NEXN-AS1Q8NBZ9 246 aa13.95□□□□□ -0.18
CIRBP-246ENST00000628979 KIF25-AS1Q9Y6Z4 181 aa13.95□□□□□ -0.18
CIRBP-246ENST00000628979 A0A087WWC5 75 aa13.94□□□□□ -0.18
CIRBP-246ENST00000628979 C16orf90A8MZG2 172 aa13.94□□□□□ -0.18
CIRBP-246ENST00000628979 GATCO43716 136 aaKnown RBP13.94□□□□□ -0.18
CIRBP-246ENST00000628979 SRP19P09132 144 aaKnown RBP13.94□□□□□ -0.18
CIRBP-246ENST00000628979 UBE2D3P61077 147 aa13.94□□□□□ -0.18
CIRBP-246ENST00000628979 UBE2D2P62837 147 aa13.94□□□□□ -0.18
CIRBP-246ENST00000628979 TEX261Q6UWH6 196 aa13.94□□□□□ -0.18
CIRBP-246ENST00000628979 Q8N3U1 123 aa13.94□□□□□ -0.18
CIRBP-246ENST00000628979 SMIM7Q9BQ49 75 aa13.94□□□□□ -0.18
CIRBP-246ENST00000628979 Q9HAA7 133 aa13.94□□□□□ -0.18
CIRBP-246ENST00000628979 NTF3P20783 257 aa13.93□□□□□ -0.18
CIRBP-246ENST00000628979 ZNF727A8MUV8 499 aa13.92□□□□□ -0.18
CIRBP-246ENST00000628979 IBA57-AS1B1ANH7 110 aa13.92□□□□□ -0.18
CIRBP-246ENST00000628979 ERVFC1-1P60608 527 aa13.92□□□□□ -0.18
CIRBP-246ENST00000628979 OR10G8Q8NGN5 311 aa13.92□□□□□ -0.18
CIRBP-246ENST00000628979 DNAH11Q96DT5 4516 aa13.91□□□□□ -0.18
CIRBP-246ENST00000628979 TRGC1P0CF51 173 aa13.91□□□□□ -0.18
CIRBP-246ENST00000628979 TWIST1Q15672 202 aa13.91□□□□□ -0.18
CIRBP-246ENST00000628979 EREGO14944 169 aa13.9□□□□□ -0.18
CIRBP-246ENST00000628979 KRTAP10-2P60368 255 aa13.9□□□□□ -0.18
CIRBP-246ENST00000628979 DYNC1H1Q14204 4646 aaKnown RBP13.9□□□□□ -0.18
CIRBP-246ENST00000628979 PSCAO43653 123 aa13.89□□□□□ -0.19
CIRBP-246ENST00000628979 NDUFS6O75380 124 aaKnown RBP13.89□□□□□ -0.19
CIRBP-246ENST00000628979 CTRLP40313 264 aa13.89□□□□□ -0.19
CIRBP-246ENST00000628979 FAM231DQ6ZW35 169 aa13.89□□□□□ -0.19
CIRBP-246ENST00000628979 DAZ4Q86SG3 579 aaKnown RBP13.89□□□□□ -0.19
CIRBP-246ENST00000628979 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms