RNA–Protein interactions for RNA: ENST00000625778.2

UBE3A-209, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-209ENST00000625778 HERVK_113P61574 105 aa10.53□□□□□ -0.72
UBE3A-209ENST00000625778 TRPT1Q86TN4 253 aaKnown RBP10.53□□□□□ -0.72
UBE3A-209ENST00000625778 EEF1AKMT3Q96AZ1 226 aa10.53□□□□□ -0.72
UBE3A-209ENST00000625778 OPRPNQ99935 248 aaPredicted RBP10.53□□□□□ -0.72
UBE3A-209ENST00000625778 TRAV2A0A0B4J234 112 aa10.52□□□□□ -0.72
UBE3A-209ENST00000625778 RBAKDNA6NC62 111 aa10.52□□□□□ -0.72
UBE3A-209ENST00000625778 ODF3BA8MYP8 253 aa10.52□□□□□ -0.72
UBE3A-209ENST00000625778 NOTCH3Q9UM47 2321 aa10.52□□□□□ -0.73
UBE3A-209ENST00000625778 CCL21O00585 134 aa10.52□□□□□ -0.73
UBE3A-209ENST00000625778 TRBV12-3P01733 135 aa10.52□□□□□ -0.73
UBE3A-209ENST00000625778 NDUFA11Q86Y39 141 aa10.52□□□□□ -0.73
UBE3A-209ENST00000625778 DOPEY2Q9Y3R5 2298 aa10.52□□□□□ -0.73
UBE3A-209ENST00000625778 TSPEAR-AS2P59090 65 aa10.52□□□□□ -0.73
UBE3A-209ENST00000625778 FAM110DQ8TAY7 271 aaPredicted RBP10.52□□□□□ -0.73
UBE3A-209ENST00000625778 UNQ9165/PRO28630Q6UXU0 137 aa10.51□□□□□ -0.73
UBE3A-209ENST00000625778 TRAV21A0A0B4J279 112 aa10.51□□□□□ -0.73
UBE3A-209ENST00000625778 TEN1Q86WV5 123 aa10.51□□□□□ -0.73
UBE3A-209ENST00000625778 ADARB2-AS1A8MUL3 147 aa10.5□□□□□ -0.73
UBE3A-209ENST00000625778 CRIP2P52943 208 aaPredicted RBP10.5□□□□□ -0.73
UBE3A-209ENST00000625778 A0A0J9YY99 117 aa10.5□□□□□ -0.73
UBE3A-209ENST00000625778 CFC1BP0CG36 223 aa10.5□□□□□ -0.73
UBE3A-209ENST00000625778 CFC1P0CG37 223 aa10.5□□□□□ -0.73
UBE3A-209ENST00000625778 LGALS3P17931 250 aaKnown RBP10.5□□□□□ -0.73
UBE3A-209ENST00000625778 NTN5Q8WTR8 489 aaPredicted RBP10.5□□□□□ -0.73
UBE3A-209ENST00000625778 M0R1W7 72 aa10.5□□□□□ -0.73
UBE3A-209ENST00000625778 SAA4P35542 130 aa10.5□□□□□ -0.73
UBE3A-209ENST00000625778 UBE2D1P51668 147 aa10.5□□□□□ -0.73
UBE3A-209ENST00000625778 CDSNQ15517 529 aa10.5□□□□□ -0.73
UBE3A-209ENST00000625778 C9orf47Q6ZRZ4 202 aa10.5□□□□□ -0.73
UBE3A-209ENST00000625778 LYRM7Q5U5X0 104 aa10.49□□□□□ -0.73
UBE3A-209ENST00000625778 CSPG4Q6UVK1 2322 aa10.49□□□□□ -0.73
UBE3A-209ENST00000625778 CRYGDP07320 174 aa10.49□□□□□ -0.73
UBE3A-209ENST00000625778 CD7P09564 240 aa10.49□□□□□ -0.73
UBE3A-209ENST00000625778 VPREB3Q9UKI3 123 aa10.49□□□□□ -0.73
UBE3A-209ENST00000625778 TNFRSF18Q9Y5U5 241 aa10.49□□□□□ -0.73
UBE3A-209ENST00000625778 CUBNO60494 3623 aa10.49□□□□□ -0.73
UBE3A-209ENST00000625778 NPC2P61916 151 aa10.48□□□□□ -0.73
UBE3A-209ENST00000625778 Q8N6K4 173 aa10.48□□□□□ -0.73
UBE3A-209ENST00000625778 ZFAND2AQ8N6M9 145 aa10.48□□□□□ -0.73
UBE3A-209ENST00000625778 C15orf53Q8NAA6 179 aa10.48□□□□□ -0.73
UBE3A-209ENST00000625778 MUC6Q6W4X9 2439 aa10.48□□□□□ -0.73
UBE3A-209ENST00000625778 KLK5Q9Y337 293 aaPredicted RBP10.48□□□□□ -0.73
UBE3A-209ENST00000625778 TMEM262E9PQX1 116 aa10.48□□□□□ -0.73
UBE3A-209ENST00000625778 TSHBP01222 138 aa10.48□□□□□ -0.73
UBE3A-209ENST00000625778 A4D1N5 150 aa10.47□□□□□ -0.73
UBE3A-209ENST00000625778 COX6B1P14854 86 aa10.47□□□□□ -0.73
UBE3A-209ENST00000625778 LY6EQ16553 131 aa10.47□□□□□ -0.73
UBE3A-209ENST00000625778 SLC25A20O43772 301 aa10.47□□□□□ -0.73
UBE3A-209ENST00000625778 PRSS2P07478 247 aa10.47□□□□□ -0.73
UBE3A-209ENST00000625778 PRO1854Q9UHT4 67 aa10.47□□□□□ -0.73
UBE3A-209ENST00000625778 IGLV4-69A0A075B6H9 119 aa10.46□□□□□ -0.73
UBE3A-209ENST00000625778 UBE2D3P61077 147 aa10.46□□□□□ -0.73
UBE3A-209ENST00000625778 UBE2D2P62837 147 aa10.46□□□□□ -0.73
UBE3A-209ENST00000625778 PMVKQ15126 192 aa10.46□□□□□ -0.73
UBE3A-209ENST00000625778 C10orf126Q8N4M7 172 aa10.46□□□□□ -0.73
UBE3A-209ENST00000625778 TRAV12-3A0A0B4J271 114 aa10.46□□□□□ -0.73
UBE3A-209ENST00000625778 HTN1P15515 57 aa10.46□□□□□ -0.73
UBE3A-209ENST00000625778 ZNF56Q15929 161 aa10.46□□□□□ -0.73
UBE3A-209ENST00000625778 TEX49A0A1B0GTD5 131 aa10.46□□□□□ -0.74
UBE3A-209ENST00000625778 SDHAF1A6NFY7 115 aa10.46□□□□□ -0.74
UBE3A-209ENST00000625778 RNF223E7ERA6 249 aa10.46□□□□□ -0.74
UBE3A-209ENST00000625778 J3QQQ9 107 aa10.46□□□□□ -0.74
UBE3A-209ENST00000625778 TCF15Q12870 199 aa10.46□□□□□ -0.74
UBE3A-209ENST00000625778 C9orf139Q6ZV77 190 aa10.46□□□□□ -0.74
UBE3A-209ENST00000625778 ATP6V0E2Q8NHE4 81 aa10.46□□□□□ -0.74
UBE3A-209ENST00000625778 ZNRF2Q8NHG8 242 aa10.46□□□□□ -0.74
UBE3A-209ENST00000625778 ZNF580Q9UK33 172 aa10.46□□□□□ -0.74
UBE3A-209ENST00000625778 IGHV4-4A0A075B6R2 117 aa10.45□□□□□ -0.74
UBE3A-209ENST00000625778 IGF2-ASQ6U949 168 aa10.45□□□□□ -0.74
UBE3A-209ENST00000625778 LINC00477Q96M19 166 aa10.45□□□□□ -0.74
UBE3A-209ENST00000625778 IGHV3-30P01768 117 aa10.45□□□□□ -0.74
UBE3A-209ENST00000625778 IGHV3-30-5P0DP03 117 aa10.45□□□□□ -0.74
UBE3A-209ENST00000625778 SUMO4Q6EEV6 95 aa10.45□□□□□ -0.74
UBE3A-209ENST00000625778 BRD3OSQ6XYD6 125 aa10.45□□□□□ -0.74
UBE3A-209ENST00000625778 C2CD3Q4AC94 2353 aa10.45□□□□□ -0.74
UBE3A-209ENST00000625778 RNASE3P12724 160 aaKnown RBP10.45□□□□□ -0.74
UBE3A-209ENST00000625778 GPHB5Q86YW7 130 aa10.45□□□□□ -0.74
UBE3A-209ENST00000625778 RS1O15537 224 aa10.44□□□□□ -0.74
UBE3A-209ENST00000625778 LINC00694P0DN24 101 aa10.44□□□□□ -0.74
UBE3A-209ENST00000625778 TRAV12-2A0A075B6T6 113 aa10.44□□□□□ -0.74
UBE3A-209ENST00000625778 EDN2P20800 178 aa10.44□□□□□ -0.74
UBE3A-209ENST00000625778 RNASE13Q5GAN3 156 aaKnown RBP10.44□□□□□ -0.74
UBE3A-209ENST00000625778 MUC4Q99102 2169 aa10.44□□□□□ -0.74
UBE3A-209ENST00000625778 TRBV7-1A0A0A6YYK4 115 aa10.43□□□□□ -0.74
UBE3A-209ENST00000625778 LINC01619G3V211 115 aa10.43□□□□□ -0.74
UBE3A-209ENST00000625778 RHODO00212 210 aa10.43□□□□□ -0.74
UBE3A-209ENST00000625778 MINOS1Q5TGZ0 78 aa10.43□□□□□ -0.74
UBE3A-209ENST00000625778 MINOS1-NBL1R4GNA1 71 aa10.43□□□□□ -0.74
UBE3A-209ENST00000625778 TRAV41A0A0B4J266 112 aa10.43□□□□□ -0.74
UBE3A-209ENST00000625778 ELANEP08246 267 aa10.43□□□□□ -0.74
UBE3A-209ENST00000625778 MUSTN1Q8IVN3 82 aa10.43□□□□□ -0.74
UBE3A-209ENST00000625778 OOSP1A8MZH6 123 aa10.42□□□□□ -0.74
UBE3A-209ENST00000625778 IGHV3-73A0A0B4J1V6 119 aa10.42□□□□□ -0.74
UBE3A-209ENST00000625778 NCOR2Q9Y618 2525 aa10.41□□□□□ -0.74
UBE3A-209ENST00000625778 TRAV8-4A0A0B4J246 113 aa10.41□□□□□ -0.74
UBE3A-209ENST00000625778 EBI3Q14213 229 aa10.41□□□□□ -0.74
UBE3A-209ENST00000625778 SLC25A29Q8N8R3 303 aa10.41□□□□□ -0.74
UBE3A-209ENST00000625778 MRPL53Q96EL3 112 aaKnown RBP10.41□□□□□ -0.74
UBE3A-209ENST00000625778 DUX3Q96PT4 197 aa10.41□□□□□ -0.74
UBE3A-209ENST00000625778 SPXQ9BT56 116 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms