RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 ETDBQ3ZM63 59 aa7.58□□□□□ -1.2
CLTCL1-211ENST00000621271 MRPL36Q9P0J6 103 aaKnown RBP7.58□□□□□ -1.2
CLTCL1-211ENST00000621271 I3L2K1 104 aa7.58□□□□□ -1.2
CLTCL1-211ENST00000621271 DSCR8Q96T75 97 aa7.58□□□□□ -1.2
CLTCL1-211ENST00000621271 NDUFS5O43920 106 aa7.58□□□□□ -1.2
CLTCL1-211ENST00000621271 NUPR1O60356 82 aa7.58□□□□□ -1.2
CLTCL1-211ENST00000621271 DEFB125Q8N687 156 aa7.58□□□□□ -1.2
CLTCL1-211ENST00000621271 SLC25A29Q8N8R3 303 aa7.58□□□□□ -1.2
CLTCL1-211ENST00000621271 SIVA1O15304 175 aa7.58□□□□□ -1.2
CLTCL1-211ENST00000621271 CRYGCP07315 174 aa7.58□□□□□ -1.2
CLTCL1-211ENST00000621271 TMEM61Q8N0U2 210 aa7.58□□□□□ -1.2
CLTCL1-211ENST00000621271 DEFB105AQ8NG35 78 aa7.58□□□□□ -1.2
CLTCL1-211ENST00000621271 LMO4P61968 165 aa7.57□□□□□ -1.2
CLTCL1-211ENST00000621271 SPANXA1Q9NS26 97 aa7.57□□□□□ -1.2
CLTCL1-211ENST00000621271 ANAPC1Q9H1A4 1944 aa7.57□□□□□ -1.2
CLTCL1-211ENST00000621271 TRBV20-1A0A075B6N2 111 aa7.57□□□□□ -1.2
CLTCL1-211ENST00000621271 RITA1Q96K30 269 aa7.57□□□□□ -1.2
CLTCL1-211ENST00000621271 NPYP01303 97 aa7.57□□□□□ -1.2
CLTCL1-211ENST00000621271 C14orf177Q52M58 125 aa7.57□□□□□ -1.2
CLTCL1-211ENST00000621271 HIVEP3Q5T1R4 2406 aa7.56□□□□□ -1.2
CLTCL1-211ENST00000621271 C9JAW5 83 aa7.56□□□□□ -1.2
CLTCL1-211ENST00000621271 IGLV1-47P01700 117 aa7.56□□□□□ -1.2
CLTCL1-211ENST00000621271 PLA2G2AP14555 144 aa7.56□□□□□ -1.2
CLTCL1-211ENST00000621271 Q6ZVH6 145 aa7.56□□□□□ -1.2
CLTCL1-211ENST00000621271 TDRG1Q3Y452 100 aa7.56□□□□□ -1.2
CLTCL1-211ENST00000621271 Q6YL49 198 aa7.56□□□□□ -1.2
CLTCL1-211ENST00000621271 Q6ZSR3 168 aa7.56□□□□□ -1.2
CLTCL1-211ENST00000621271 GAGE12HA6NDE8 117 aa7.56□□□□□ -1.2
CLTCL1-211ENST00000621271 NDUFA1O15239 70 aa7.56□□□□□ -1.2
CLTCL1-211ENST00000621271 PPDPFLQ8WWR9 84 aa7.56□□□□□ -1.2
CLTCL1-211ENST00000621271 UBL5Q9BZL1 73 aa7.56□□□□□ -1.2
CLTCL1-211ENST00000621271 EGR2P11161 476 aaPredicted RBP7.56□□□□□ -1.2
CLTCL1-211ENST00000621271 hADV29S1A0JD25 119 aa7.55□□□□□ -1.2
CLTCL1-211ENST00000621271 WISP2O76076 250 aa7.55□□□□□ -1.2
CLTCL1-211ENST00000621271 LTAP01374 205 aa7.55□□□□□ -1.2
CLTCL1-211ENST00000621271 IGKV1-17P01599 117 aa7.55□□□□□ -1.2
CLTCL1-211ENST00000621271 HAMPP81172 84 aa7.55□□□□□ -1.2
CLTCL1-211ENST00000621271 TRAV4A0A0B4J268 109 aa7.55□□□□□ -1.2
CLTCL1-211ENST00000621271 F8VRH5 84 aa7.55□□□□□ -1.2
CLTCL1-211ENST00000621271 PRO0255Q9UI72 69 aa7.55□□□□□ -1.2
CLTCL1-211ENST00000621271 KLK12Q9UKR0 248 aa7.55□□□□□ -1.2
CLTCL1-211ENST00000621271 J3QQQ9 107 aa7.55□□□□□ -1.2
CLTCL1-211ENST00000621271 ZNF747Q9BV97 191 aa7.55□□□□□ -1.2
CLTCL1-211ENST00000621271 DOPEY1Q5JWR5 2465 aa7.54□□□□□ -1.2
CLTCL1-211ENST00000621271 CEND1Q8N111 149 aa7.54□□□□□ -1.2
CLTCL1-211ENST00000621271 FGF23Q9GZV9 251 aaPredicted RBP7.54□□□□□ -1.2
CLTCL1-211ENST00000621271 Q9H8V8 135 aa7.54□□□□□ -1.2
CLTCL1-211ENST00000621271 MRPL35Q9NZE8 188 aaKnown RBP7.54□□□□□ -1.2
CLTCL1-211ENST00000621271 DYSFO75923 2080 aa7.54□□□□□ -1.2
CLTCL1-211ENST00000621271 K7EMI3 77 aa7.54□□□□□ -1.2
CLTCL1-211ENST00000621271 HERV-K104P63124 156 aa7.54□□□□□ -1.2
CLTCL1-211ENST00000621271 KRTAP27-1Q3LI81 207 aa7.54□□□□□ -1.2
CLTCL1-211ENST00000621271 VSIG2Q96IQ7 327 aa7.54□□□□□ -1.2
CLTCL1-211ENST00000621271 TRBV7-3A0A075B6L6 115 aa7.54□□□□□ -1.2
CLTCL1-211ENST00000621271 ASPHD1Q5U4P2 390 aa7.54□□□□□ -1.2
CLTCL1-211ENST00000621271 Q8N1Y9 231 aa7.54□□□□□ -1.2
CLTCL1-211ENST00000621271 C2orf16Q68DN1 1984 aa7.53□□□□□ -1.2
CLTCL1-211ENST00000621271 RNASE8Q8TDE3 154 aaKnown RBP7.53□□□□□ -1.2
CLTCL1-211ENST00000621271 TMEM263Q8WUH6 116 aaKnown RBP7.53□□□□□ -1.2
CLTCL1-211ENST00000621271 IGHV4-4A0A075B6R2 117 aa7.53□□□□□ -1.2
CLTCL1-211ENST00000621271 PLXNB3Q9ULL4 1909 aa7.53□□□□□ -1.2
CLTCL1-211ENST00000621271 ABCA2Q9BZC7 2435 aa7.52□□□□□ -1.2
CLTCL1-211ENST00000621271 H3BMG7 143 aa7.52□□□□□ -1.21
CLTCL1-211ENST00000621271 IGHG4P01861 327 aa7.52□□□□□ -1.21
CLTCL1-211ENST00000621271 MORN5Q5VZ52 161 aa7.52□□□□□ -1.21
CLTCL1-211ENST00000621271 MAP6D1Q9H9H5 199 aa7.52□□□□□ -1.21
CLTCL1-211ENST00000621271 DEFB131BA0A096LNP1 70 aa7.52□□□□□ -1.21
CLTCL1-211ENST00000621271 K7ERJ3 54 aa7.52□□□□□ -1.21
CLTCL1-211ENST00000621271 FUSP35637 526 aaKnown RBP eCLIP7.51□□□□□ -1.21
CLTCL1-211ENST00000621271 C11orf1Q9H5F2 150 aa7.51□□□□□ -1.21
CLTCL1-211ENST00000621271 DENND4AQ7Z401 1863 aa7.51□□□□□ -1.21
CLTCL1-211ENST00000621271 DKK2Q9UBU2 259 aa7.51□□□□□ -1.21
CLTCL1-211ENST00000621271 TEX22C9J3V5 150 aa7.51□□□□□ -1.21
CLTCL1-211ENST00000621271 SORL1Q92673 2214 aa7.5□□□□□ -1.21
CLTCL1-211ENST00000621271 NDUFB1O75438 58 aa7.5□□□□□ -1.21
CLTCL1-211ENST00000621271 SPAG11BQ08648 103 aa7.5□□□□□ -1.21
CLTCL1-211ENST00000621271 MSMPQ1L6U9 139 aa7.5□□□□□ -1.21
CLTCL1-211ENST00000621271 Q6ZSV7 163 aa7.5□□□□□ -1.21
CLTCL1-211ENST00000621271 CHD8Q9HCK8 2581 aa7.5□□□□□ -1.21
CLTCL1-211ENST00000621271 TRBV12-3P01733 135 aa7.5□□□□□ -1.21
CLTCL1-211ENST00000621271 FGF6P10767 208 aa7.5□□□□□ -1.21
CLTCL1-211ENST00000621271 C12orf74Q32Q52 190 aa7.5□□□□□ -1.21
CLTCL1-211ENST00000621271 UNQ9165/PRO28630Q6UXU0 137 aa7.5□□□□□ -1.21
CLTCL1-211ENST00000621271 SMIM9A6NGZ8 99 aa7.5□□□□□ -1.21
CLTCL1-211ENST00000621271 LINC01545Q5VT33 79 aa7.5□□□□□ -1.21
CLTCL1-211ENST00000621271 DENND4CQ5VZ89 1909 aa7.5□□□□□ -1.21
CLTCL1-211ENST00000621271 TRAV26-1A0A087WT03 109 aa7.49□□□□□ -1.21
CLTCL1-211ENST00000621271 WI2-2373I1.2A0A1W2PRP0 233 aa7.49□□□□□ -1.21
CLTCL1-211ENST00000621271 PROP1O75360 226 aa7.49□□□□□ -1.21
CLTCL1-211ENST00000621271 IGKV2-24A0A0C4DH68 120 aa7.49□□□□□ -1.21
CLTCL1-211ENST00000621271 A0A0J9YX75 114 aa7.49□□□□□ -1.21
CLTCL1-211ENST00000621271 C9orf47Q6ZRZ4 202 aa7.49□□□□□ -1.21
CLTCL1-211ENST00000621271 PCP2Q8IVA1 136 aa7.49□□□□□ -1.21
CLTCL1-211ENST00000621271 FAM110AQ9BQ89 295 aa7.49□□□□□ -1.21
CLTCL1-211ENST00000621271 PRO1854Q9UHT4 67 aa7.49□□□□□ -1.21
CLTCL1-211ENST00000621271 CXCL5P42830 114 aa7.48□□□□□ -1.21
CLTCL1-211ENST00000621271 COX7B2Q8TF08 81 aa7.48□□□□□ -1.21
CLTCL1-211ENST00000621271 RPL39LQ96EH5 51 aaKnown RBP7.48□□□□□ -1.21
CLTCL1-211ENST00000621271 COL4A3Q01955 1670 aa7.48□□□□□ -1.21
CLTCL1-211ENST00000621271 LYRM9A8MSI8 78 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms