RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 PRR25Q96S07 402 aa6.41□□□□□ -1.38
PTPDC1-204ENST00000620992 SMR3AQ99954 134 aa6.41□□□□□ -1.38
PTPDC1-204ENST00000620992 MRPS16Q9Y3D3 137 aaKnown RBP6.41□□□□□ -1.38
PTPDC1-204ENST00000620992 TEX15Q9BXT5 2789 aa6.41□□□□□ -1.38
PTPDC1-204ENST00000620992 A0A087X0K7 114 aa6.41□□□□□ -1.38
PTPDC1-204ENST00000620992 TNFRSF13BO14836 293 aaPredicted RBP6.41□□□□□ -1.38
PTPDC1-204ENST00000620992 SLC25A20O43772 301 aa6.41□□□□□ -1.38
PTPDC1-204ENST00000620992 TRBV12-3P01733 135 aa6.41□□□□□ -1.38
PTPDC1-204ENST00000620992 IGKCP01834 107 aa6.41□□□□□ -1.38
PTPDC1-204ENST00000620992 CDSNQ15517 529 aa6.41□□□□□ -1.38
PTPDC1-204ENST00000620992 LRBAP50851 2863 aa6.41□□□□□ -1.38
PTPDC1-204ENST00000620992 ZZEF1O43149 2961 aa6.41□□□□□ -1.38
PTPDC1-204ENST00000620992 DYNAPQ8N1N2 210 aa6.41□□□□□ -1.38
PTPDC1-204ENST00000620992 OR2K2Q8NGT1 345 aa6.41□□□□□ -1.38
PTPDC1-204ENST00000620992 ATP6V0BQ99437 205 aa6.41□□□□□ -1.38
PTPDC1-204ENST00000620992 AGPAT4-IT1Q9H0P7 198 aa6.41□□□□□ -1.38
PTPDC1-204ENST00000620992 TP53TG1Q9Y2A0 90 aa6.41□□□□□ -1.38
PTPDC1-204ENST00000620992 IGHV7-4-1A0A0J9YVY3 117 aa6.4□□□□□ -1.38
PTPDC1-204ENST00000620992 A0A1B0GW15 77 aa6.4□□□□□ -1.38
PTPDC1-204ENST00000620992 I3L2K1 104 aa6.4□□□□□ -1.38
PTPDC1-204ENST00000620992 J3QLI3 93 aa6.4□□□□□ -1.38
PTPDC1-204ENST00000620992 TNFRSF6BO95407 300 aa6.4□□□□□ -1.38
PTPDC1-204ENST00000620992 ELANEP08246 267 aa6.4□□□□□ -1.38
PTPDC1-204ENST00000620992 GATA1P15976 413 aaPredicted RBP6.4□□□□□ -1.38
PTPDC1-204ENST00000620992 MTURNQ8N3F0 131 aa6.4□□□□□ -1.38
PTPDC1-204ENST00000620992 SPCS1Q9Y6A9 102 aa6.4□□□□□ -1.38
PTPDC1-204ENST00000620992 RELNP78509 3460 aa6.4□□□□□ -1.38
PTPDC1-204ENST00000620992 IGHV4OR15-8A0A075B7B6 117 aa6.4□□□□□ -1.38
PTPDC1-204ENST00000620992 A0A087WW49 117 aa6.4□□□□□ -1.38
PTPDC1-204ENST00000620992 ZNF561-AS1K7EIQ3 104 aa6.4□□□□□ -1.38
PTPDC1-204ENST00000620992 NDUFA4O00483 81 aa6.4□□□□□ -1.38
PTPDC1-204ENST00000620992 CMC4P56277 68 aaPredicted RBP6.4□□□□□ -1.38
PTPDC1-204ENST00000620992 ZNF843Q8N446 348 aa6.4□□□□□ -1.38
PTPDC1-204ENST00000620992 MEGF9Q9H1U4 602 aa6.4□□□□□ -1.38
PTPDC1-204ENST00000620992 ZMAT4Q9H898 229 aa6.4□□□□□ -1.38
PTPDC1-204ENST00000620992 SMPXQ9UHP9 88 aa6.4□□□□□ -1.38
PTPDC1-204ENST00000620992 TSSC4Q9Y5U2 329 aaPredicted RBP6.4□□□□□ -1.38
PTPDC1-204ENST00000620992 IGKV2D-24A0A075B6R9 120 aa6.4□□□□□ -1.39
PTPDC1-204ENST00000620992 CCL25O15444 150 aa6.4□□□□□ -1.39
PTPDC1-204ENST00000620992 CRYGBP07316 175 aa6.4□□□□□ -1.39
PTPDC1-204ENST00000620992 GFRA4Q9GZZ7 299 aa6.4□□□□□ -1.39
PTPDC1-204ENST00000620992 COX11Q9Y6N1 276 aa6.4□□□□□ -1.39
PTPDC1-204ENST00000620992 U3KQE9 123 aa6.4□□□□□ -1.39
PTPDC1-204ENST00000620992 XCL1P47992 114 aa6.39□□□□□ -1.39
PTPDC1-204ENST00000620992 PRORYQ9H606 182 aa6.39□□□□□ -1.39
PTPDC1-204ENST00000620992 K7EIM0 57 aa6.39□□□□□ -1.39
PTPDC1-204ENST00000620992 C10orf99Q6UWK7 81 aa6.39□□□□□ -1.39
PTPDC1-204ENST00000620992 CSMD1Q96PZ7 3565 aa6.39□□□□□ -1.39
PTPDC1-204ENST00000620992 RBMY1BA6NDE4 496 aaKnown RBP6.39□□□□□ -1.39
PTPDC1-204ENST00000620992 RBMY1EA6NEQ0 496 aaKnown RBP6.39□□□□□ -1.39
PTPDC1-204ENST00000620992 TSPAN13O95857 204 aa6.39□□□□□ -1.39
PTPDC1-204ENST00000620992 RBMY1DP0C7P1 496 aaKnown RBP6.39□□□□□ -1.39
PTPDC1-204ENST00000620992 RBMY1A1P0DJD3 496 aaKnown RBP6.39□□□□□ -1.39
PTPDC1-204ENST00000620992 RBMY1CP0DJD4 496 aa6.39□□□□□ -1.39
PTPDC1-204ENST00000620992 FBXL19-AS1Q494R0 122 aa6.39□□□□□ -1.39
PTPDC1-204ENST00000620992 ORAOV1Q8WV07 137 aa6.39□□□□□ -1.39
PTPDC1-204ENST00000620992 CHD6Q8TD26 2715 aa6.39□□□□□ -1.39
PTPDC1-204ENST00000620992 IGLV2-11P01706 119 aa6.39□□□□□ -1.39
PTPDC1-204ENST00000620992 C2orf66Q6UXQ4 117 aa6.39□□□□□ -1.39
PTPDC1-204ENST00000620992 Q8N9W7 124 aa6.39□□□□□ -1.39
PTPDC1-204ENST00000620992 TMEM14CQ9P0S9 112 aa6.39□□□□□ -1.39
PTPDC1-204ENST00000620992 COL6A5A8TX70 2615 aa6.38□□□□□ -1.39
PTPDC1-204ENST00000620992 MSRB1Q9NZV6 116 aa6.38□□□□□ -1.39
PTPDC1-204ENST00000620992 FAM231BA6NCW3 169 aa6.38□□□□□ -1.39
PTPDC1-204ENST00000620992 C5orf38Q86SI9 138 aa6.38□□□□□ -1.39
PTPDC1-204ENST00000620992 LAMTOR3Q9UHA4 124 aa6.38□□□□□ -1.39
PTPDC1-204ENST00000620992 UBE2V1Q13404 147 aa6.38□□□□□ -1.39
PTPDC1-204ENST00000620992 UNQ9165/PRO28630Q6UXU0 137 aa6.38□□□□□ -1.39
PTPDC1-204ENST00000620992 TMEM61Q8N0U2 210 aa6.38□□□□□ -1.39
PTPDC1-204ENST00000620992 TRAV8-2A0A0B4J237 113 aa6.37□□□□□ -1.39
PTPDC1-204ENST00000620992 H3BRN7 92 aa6.37□□□□□ -1.39
PTPDC1-204ENST00000620992 FLNAP21333 2647 aaKnown RBP6.37□□□□□ -1.39
PTPDC1-204ENST00000620992 HLA-DRB4P13762 266 aa6.37□□□□□ -1.39
PTPDC1-204ENST00000620992 APOC4P55056 127 aa6.37□□□□□ -1.39
PTPDC1-204ENST00000620992 SS18Q15532 418 aa6.37□□□□□ -1.39
PTPDC1-204ENST00000620992 PET117Q6UWS5 81 aa6.37□□□□□ -1.39
PTPDC1-204ENST00000620992 ADAMTSL5Q6ZMM2 481 aa6.37□□□□□ -1.39
PTPDC1-204ENST00000620992 COPS9Q8WXC6 57 aa6.37□□□□□ -1.39
PTPDC1-204ENST00000620992 HLA-DRB4X5D2U9 266 aa6.37□□□□□ -1.39
PTPDC1-204ENST00000620992 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.37□□□□□ -1.39
PTPDC1-204ENST00000620992 IGKV2-29A2NJV5 120 aaPredicted RBP6.37□□□□□ -1.39
PTPDC1-204ENST00000620992 PRAC2D3DTV9 90 aa6.37□□□□□ -1.39
PTPDC1-204ENST00000620992 IGHV3-30P01768 117 aa6.37□□□□□ -1.39
PTPDC1-204ENST00000620992 IGHV3-33P01772 117 aa6.37□□□□□ -1.39
PTPDC1-204ENST00000620992 CTSGP08311 255 aa6.37□□□□□ -1.39
PTPDC1-204ENST00000620992 IGHV3-30-3P0DP02 117 aa6.37□□□□□ -1.39
PTPDC1-204ENST00000620992 IGHV3-30-5P0DP03 117 aa6.37□□□□□ -1.39
PTPDC1-204ENST00000620992 MORN3Q6PF18 240 aaPredicted RBP6.37□□□□□ -1.39
PTPDC1-204ENST00000620992 LYPD1Q8N2G4 141 aa6.37□□□□□ -1.39
PTPDC1-204ENST00000620992 CRIP1P50238 77 aa6.36□□□□□ -1.39
PTPDC1-204ENST00000620992 PDE6HQ13956 83 aa6.36□□□□□ -1.39
PTPDC1-204ENST00000620992 TRBV25-1A0A075B6N4 114 aa6.36□□□□□ -1.39
PTPDC1-204ENST00000620992 LGALS1P09382 135 aaKnown RBP6.36□□□□□ -1.39
PTPDC1-204ENST00000620992 KRTAP10-9P60411 292 aa6.36□□□□□ -1.39
PTPDC1-204ENST00000620992 LMO4P61968 165 aa6.36□□□□□ -1.39
PTPDC1-204ENST00000620992 LY6G5BQ8NDX9 201 aa6.36□□□□□ -1.39
PTPDC1-204ENST00000620992 OR11H6Q8NGC7 330 aa6.36□□□□□ -1.39
PTPDC1-204ENST00000620992 CHAC1Q9BUX1 264 aa6.36□□□□□ -1.39
PTPDC1-204ENST00000620992 M0R2P5 195 aa6.36□□□□□ -1.39
PTPDC1-204ENST00000620992 TIMM21Q9BVV7 248 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms